| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,463,609 | T→G | 8.2% | F229C (TTC→TGC) ‡ | gspK → | Type II secretion system protein GspK |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,463,609 | 0 | T | G | 8.2% | 292.6 / 16.7 | 98 | F229C (TTC→TGC) ‡ | gspK | Type II secretion system protein GspK |
| Reads supporting (aligned to +/- strand): ref base T (50/40); new base G (4/4); total (54/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.90e-01 | |||||||||||
CAGATGCTTTTTCTGACTGGCGAATTACGTCAGATAAAAGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCTTTACTGGGCGCAGCAGGATTTCTCCGGTGTGAAGCCACTGGTTGCTCAGGTG > NC_000913/3463461‑3463757 | cAGATGCTTTTTCTGACTGGCGAATTACGTCAGATAAAAGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTc > 1:143612/1‑150 (MQ=255) gATGCTTTTTCTGACTGGCGAATTACGTCAGATAAAAGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCag < 2:979884/150‑1 (MQ=255) gATGCTTTTTCTGACTGGCGAATTACGTCAGATAAAAGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCag < 1:1923425/150‑1 (MQ=255) tGCTTTTTCTGACTGGCGAATTACGTCAGATAAAAGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCagag > 1:998965/1‑150 (MQ=255) gCTTTTTCTGACTGGCGAATTACGTCAGATAAAAGGCATAACCGAAAACATCTATCAGCGGCTTATGCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGc > 2:1349816/1‑150 (MQ=255) gCTTTTTCTGACTGACGAATTACGTCAGATAAAAGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGATAACGATATTCCGCTCTTCAGAGc < 2:1106836/150‑1 (MQ=255) ttttCTGACTGGCGAATTACGTCAGATAAAAGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGtt > 2:984586/1‑150 (MQ=255) ttttCTGACTGGCGAATTACGTCAGATAAAAGGCATAACCGAAAACATCTATCAGCCGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCATAATATGCTAACCCAGAACGATATTCCGCTCTTCAGACCgat > 2:977466/1‑148 (MQ=255) tttCTGACTGGCGAATTACGTCAGATAAAAGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTGTGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTa < 2:1290265/150‑1 (MQ=255) tttCTGACTGGCGAATTACGTCAGATAAAAGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTa > 2:1417928/1‑150 (MQ=255) ttCTGACTGGCGAATTACGTCAGATAAAAGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTAt < 1:984586/150‑1 (MQ=255) ttCTGACTGGCGAATTACGTCAGATAAAAGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTAt < 1:977466/150‑1 (MQ=255) ttCTGACTGGCGAATTACGTCAGATAAAAGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTGAAGAGCggaat < 1:1430943/150‑5 (MQ=255) ttCTGACTGGCGAATTACGTCAGATAAAAGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTGAAGAGCggaat < 2:75790/150‑5 (MQ=255) tCTGACTGGCGAATTACGTCAGATAAAAGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTAtt < 2:227372/150‑1 (MQ=255) tGACTGGCGAATTACGTCAGATAAAAGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTcc < 2:1976267/150‑1 (MQ=255) tGACTGGCGAATTACGTCAGATAAAAGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTcc < 1:1654770/150‑1 (MQ=255) tGACTGGCGAATTACGTCAGATAAAAGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTGAAGAGCggaatatc < 2:429915/150‑8 (MQ=255) ggCGAATTACGTCAGATAAAAGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAAt > 1:1465307/1‑150 (MQ=255) ggCGAATTACGTCAGATAAAAGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAAt > 2:93769/1‑150 (MQ=255) aCGTCAGATAAAAGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCAc < 2:1465307/150‑1 (MQ=255) cGTCAGATAAAAGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACg > 2:1466671/1‑150 (MQ=255) cGTCAGATAAAAGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACg > 1:1335596/1‑150 (MQ=255) gTCAGATAAAAGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACgg < 1:907584/150‑1 (MQ=255) gTCAGATAAAAGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACgg > 2:1960813/1‑150 (MQ=255) gTCAGATAAAAGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTGAAGAGCggaat < 1:1590532/132‑5 (MQ=255) gTCAGATAAAAGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTGAAGAGCggaat > 2:1590532/1‑128 (MQ=255) tCAGATAAAAGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGa > 1:1593168/1‑150 (MQ=255) cAGATAAAAGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGAt > 1:127890/1‑150 (MQ=255) taTAAAAGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATga < 1:481931/149‑2 (MQ=255) tAAAAGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTg < 2:1255745/150‑1 (MQ=255) aaaGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGAc > 2:1958910/1‑150 (MQ=255) aaGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACg < 2:218455/150‑1 (MQ=255) aTAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCgg > 2:772393/1‑150 (MQ=255) tAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCggg > 2:802474/1‑150 (MQ=255) aaCCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGt > 1:593812/1‑150 (MQ=255) aaCCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGt > 2:1251580/1‑150 (MQ=255) gAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTa < 1:567418/150‑1 (MQ=255) gAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTa > 1:1543241/1‑150 (MQ=255) aaCATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTg < 2:301866/150‑1 (MQ=255) aCATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGc < 1:802474/150‑1 (MQ=255) aCATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGc < 2:593812/150‑1 (MQ=255) cATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCa < 1:1369439/150‑1 (MQ=255) cATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCa > 2:392676/1‑150 (MQ=255) aTCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCaa > 1:709967/1‑150 (MQ=255) tCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAg < 1:1646510/150‑1 (MQ=255) tCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAg < 1:941224/150‑1 (MQ=255) cAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAgg < 2:1550155/150‑1 (MQ=255) ggCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCggg < 2:1175942/129‑1 (MQ=255) ggCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCggg > 1:1175942/1‑129 (MQ=255) cTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAgg > 1:511026/1‑150 (MQ=255) cTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAgg < 2:1712278/150‑1 (MQ=255) ttATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAggg < 1:392676/150‑1 (MQ=255) cccGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAgg > 1:544529/1‑150 (MQ=255) cccGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATATTAATATGCTAACGGAGAACGATATTCCGATCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAgg > 2:363900/1‑150 (MQ=255) ccGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAggc > 1:557554/1‑150 (MQ=255) gTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAggctg < 2:998965/150‑1 (MQ=255) tATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAggctgg > 1:830477/1‑150 (MQ=255) tctcCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGa > 1:162751/1‑150 (MQ=255) ctcCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCGAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGAt < 1:1349816/150‑1 (MQ=255) ctcCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGAt > 2:1887412/1‑150 (MQ=255) tcCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATg < 1:1251580/150‑1 (MQ=255) tcCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATg > 1:1555486/1‑150 (MQ=255) ccGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCa > 1:1733840/1‑150 (MQ=255) cACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCt > 1:368057/1‑150 (MQ=255) aCGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCtt > 2:1635907/1‑150 (MQ=255) aCGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCtt < 2:742971/150‑1 (MQ=255) aaCTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCCGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCGGAGGGAAGGCTGGCTAACCACGGATGCATTTCTTTACt < 1:1043308/150‑1 (MQ=255) cTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCTTTACTgg > 1:388283/1‑150 (MQ=255) cATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCTTTACTGGGCgca > 2:605598/1‑150 (MQ=255) cATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCTTTACTGGGCgca < 1:1635907/150‑1 (MQ=255) aTCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCTTTACTGGGCgcag > 1:1634468/1‑150 (MQ=255) cAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCTTTACTGGGCgcagca > 2:1834181/1‑150 (MQ=255) aaTCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCTTTACTGGGCGcagcag > 2:1879680/1‑150 (MQ=255) tCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCTTTACTGGGCGCAGCAGGa > 2:398966/1‑150 (MQ=255) tAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCTTTACTGGGCGCAGCAGGAttt > 2:532950/1‑150 (MQ=255) tAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCTTTACTGGGCGCAGCAGGAttt > 1:248341/1‑150 (MQ=255) aaTATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCTTTACTGGGCGCAGCAGGATTtc < 2:1534532/150‑1 (MQ=255) tatGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCTTTACTGGGCGCAGCAGGATTtctc < 1:93769/150‑1 (MQ=255) tGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCTTTACTGGGCGCAGCAGGATTTCTCCg > 2:1588950/1‑150 (MQ=255) gCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCTTTACTGGGCGCAGCAGGATTTCTCCgg < 2:1335596/150‑1 (MQ=255) cTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCTTTACTGGGCGCAGCAGGATTTCTCCgg > 2:370859/1‑149 (MQ=255) cTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCTTTACTGGGCGCAGCAGGATTTCTCCgg < 1:370859/149‑1 (MQ=255) tAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCTTTACTGGGCGCAGCAGGATTTCTCCGgtg < 1:1277888/150‑1 (MQ=255) aaCGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCTTTACTGGGCGCAGCAGGATTTCTCCGgtgt > 1:852643/1‑150 (MQ=255) aaCGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCTTTACTGGGCGCAGCAGGATTTCTCCGgtgt > 1:1443154/1‑150 (MQ=255) aaCGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCTTTACTGGGCGCAGCAGGATTTCTCCGgtgt > 2:579577/1‑150 (MQ=255) gagaACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCTTTACTGGGCGCAGCAGGATTTCTCCGGTGTGAAg > 1:836657/1‑150 (MQ=255) agaACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCTTTACTGGGCGCAGCAGGATTTCTCCGGTGTGAAGc > 2:1804261/1‑150 (MQ=255) gaACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCTTTACTGGGCGCAGCAGGATTTCTCCGGTGTGAAGcc < 1:449852/150‑1 (MQ=255) gaAAGATATTCCGATCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCTTTACTGGGCGCAGCAGGATTTCTACGGTGTGAAGcc > 2:838280/1‑150 (MQ=255) cGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCTTTACTGGGCGCAGCAGGATTTCTCCGGTGTGAAGCCACt < 1:1887412/150‑1 (MQ=255) gaataacGCTCTGAAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCTTTACTGGGCGCAGCAGGATTTCTCCGGTGTGAAGCCACTgg > 2:207675/7‑150 (MQ=255) aataacGCTCTGAAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGACTAACCACGGATGCATTTCTTTACTGGGCGCAGCAGGATTTCTCCGGTGTGAAGCCACTGGt > 1:911173/6‑150 (MQ=255) taccGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATCCTGACGCTAGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCAAAACACCGATGCATTTCTTTACTGGGCGCAGCAGGATTTCTCCGGTGTGAAGCCACTGGTTg > 2:1014256/3‑150 (MQ=255) tCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCTTTACTGGGCGCAGCAGGATTTCTCCGGTGTGAAGCCACTGGTTGc < 1:772393/150‑1 (MQ=255) acGCTCTGAAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCTTTACTGGGCGCAGCAGGATTTCTCCGGTGTGAAGCCACTGGTTGCt > 1:272241/2‑150 (MQ=255) tctTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCTTTACTGGGCGCAGCAGGATTTCTCCGGTGTGAAGCCACTGGTTGCTCAgg < 2:368057/150‑1 (MQ=255) ttCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCTAAAAAGGCCGAGGGAAGGCTGGCTAACCAGGTATGCATTTCTTTACTGGGCTCAGCAGGATTTCTCCGGTGTGAAGCCACTGGTTGCTCAGGTg < 2:1593168/150‑1 (MQ=255) | CAGATGCTTTTTCTGACTGGCGAATTACGTCAGATAAAAGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCTTTACTGGGCGCAGCAGGATTTCTCCGGTGTGAAGCCACTGGTTGCTCAGGTG > NC_000913/3463461‑3463757 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |