| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 440,663 | T→G | 7.2% | S147R (AGC→CGC) ‡ | ispA ← | geranyl diphosphate/farnesyl diphosphate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 440,663 | 0 | T | G | 7.2% | 292.5 / 13.4 | 98 | S147R (AGC→CGC) ‡ | ispA | geranyl diphosphate/farnesyl diphosphate synthase |
| Reads supporting (aligned to +/- strand): ref base T (50/40); new base G (3/4); total (54/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.98e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.41e-01 | |||||||||||
CTTAATGCACCAAGGCGAACGGCGGCGCGAATCAATGCGCCGGTTTTATGACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGCGTCGCCAGCGAGAATCGCGTTTGCTTCGCCAAACTTCACATGGCAGGTTGGCA > NC_000913/440515‑440809 | cTTAATGCACCAAGGCGAACGGCGGCGCGAATCAATGCGCCGGTTTTATGACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTc > 1:1165939/1‑150 (MQ=255) tAATGCACCAAGGCGAACGGCGGCGCGAATCAATGCGCCGGTTTTATGACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGc > 1:63357/1‑150 (MQ=255) gCACCAAGGCGAACGGCGGCGCGAATCAATGCGCCGGTTTTATGACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGt > 1:185132/1‑150 (MQ=255) cACCAAGGCGAACGGCGGCGCGAATCAATGCGCCGGTTTTATGACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGtt > 2:1609742/1‑150 (MQ=255) cACCAAGGCGAACGGCGGCGCGAATCAATGCGCCGGTTTTATGACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGtt > 2:1542687/1‑150 (MQ=255) aCCAAGGCGAACGGCGGCGCGTATCAATGCGCGGGTTTTATGACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTGCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCATTACCACTGGCGAGCGCCAGtgg < 1:1166056/150‑3 (MQ=255) ccAAGGCGAACGGCGGCGCGAATCAATGCGCCGGTTTTATGACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCa < 2:469110/150‑1 (MQ=255) aaGGCGAACGGCGGCGCGAATCAATGCGCCGGTTTTATGACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGa < 1:728510/150‑1 (MQ=255) aaGGCGAACGGCGGCGCGAATCAATGCGCCGGTTTTATGACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGAGCGCCAGtggtat < 2:404249/150‑6 (MQ=255) aaGGCGAACGGCGGCGCGAATCAATGCGCCGGTTTTATGACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGAGCGCCAGtggtat < 2:1713970/150‑6 (MQ=255) aGGCGAACGGCGGCGCGAATCAATGCGCCGGTTTTATGACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGaa > 2:454430/1‑150 (MQ=255) cGAACGGCGGCGCGAATCAATGCGCCGGTTTTATGACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGAGCGCCAGtggta < 2:1835826/145‑5 (MQ=255) cGAACGGCGGCGCGAATCAATGCGCCGGTTTTATGACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGAGCGCCAGtggta > 1:1835826/1‑141 (MQ=255) cggcggCGCGAATCAATGCGCCGGTTTTATGACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCg < 1:94212/150‑1 (MQ=255) ggcggcGCGAATCAATGCGCCGGTTTTATGACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGa > 2:697780/1‑150 (MQ=255) ggcgCGAATCAATGCGCCGGTTTTATGACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAAt < 2:1824506/150‑1 (MQ=255) cgAATCAATGCGCCGGTTTTATGACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTg < 1:1731886/150‑1 (MQ=255) aTCAATGCGCCGGTTTTATGACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTcg < 1:985379/150‑1 (MQ=255) tCAATGCGCCGGTTTTATGACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTcgc < 2:63357/150‑1 (MQ=255) tCAATGCGCCGGTTTTATGACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTcgc < 1:1631202/150‑1 (MQ=255) cAATGCGCCGGTTTTATGACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTcgcg > 2:1702619/1‑150 (MQ=255) aTGCGCCGGTTTTATGACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGt < 1:201990/150‑1 (MQ=255) gcgcCGGTTTTATGACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTg < 2:1274582/141‑1 (MQ=255) gcgcCGGTTTTATGACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTg > 1:1274582/1‑141 (MQ=255) cgcCGGTTTTATGACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCg > 2:466291/1‑150 (MQ=255) cgcCGGTTTTATGACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCg > 1:398095/1‑150 (MQ=255) gcCGGTTTTATGACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGa > 2:1724391/1‑150 (MQ=255) gcCGGTTTTATGACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGa > 2:748887/1‑150 (MQ=255) ggTTTTATGACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGacac > 2:534507/1‑150 (MQ=255) ttATGACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTcc > 1:297418/1‑150 (MQ=255) ttGACGATGAATACGGTCAAGCGCGTCCAGAGGTTCGTGTTTGCCTTCCGCGTCTAAATCTATTGGCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCgg < 2:1984068/149‑1 (MQ=255) tGACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGc < 1:746442/150‑1 (MQ=255) tGACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGc < 2:185132/150‑1 (MQ=255) gACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAatcatc > 1:657266/1‑119 (MQ=255) gACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAatcatc < 2:657266/119‑1 (MQ=255) gACGATGAATACGCTCAAGCGCGTCCAGAGGTACCTGTTAGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACAATCCGGCAATACCACAGGCGCACGCCAGATCAGAAAACAACGAAAATCACTCGACCTCCGACACTTcagcag > 1:1984068/1‑145 (MQ=255) cGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATACTGTCGCGGTCCGACACTTCCGGCata > 2:1548212/1‑150 (MQ=255) tGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCg > 1:1414992/1‑150 (MQ=255) tGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGAACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGCTCCGACACTTCCGGCATATCg > 1:937306/1‑150 (MQ=255) gAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCgg < 2:202850/150‑1 (MQ=255) aaTACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGc > 1:1949828/1‑150 (MQ=255) aaTACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTCCCGGCATATCGGc > 2:485163/1‑150 (MQ=255) aTACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCa < 2:1821351/142‑1 (MQ=255) aTACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCa > 1:1821351/1‑142 (MQ=255) aTACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCa > 1:1211071/1‑150 (MQ=255) aTACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCa > 2:755398/1‑150 (MQ=255) gCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGc < 2:149174/150‑1 (MQ=255) cTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCt > 1:1470674/1‑150 (MQ=255) cTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCt < 2:306087/150‑1 (MQ=255) cTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCt > 1:373616/1‑150 (MQ=255) cAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTa > 2:297754/1‑150 (MQ=255) gcgTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATc < 1:1853155/150‑1 (MQ=255) cgTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCg < 1:1609742/150‑1 (MQ=255) gTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCga < 2:1707275/150‑1 (MQ=255) agagGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAAc > 2:579027/1‑150 (MQ=255) tgtTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGtt > 2:1498590/1‑150 (MQ=255) gtTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGttt < 2:768079/150‑1 (MQ=255) tGCCTTCCGCGTCTAAATCTAATGCCTGACCAGCGCACATTCCGGCAATAACACTGGCGCTCGCCAGTTCAGAATTCATCGAAATTCTGTGGCTGTGCGACAGTTCCGGCATATGGGCTTCGCTTATAATCGAGAACGGCATCGTTTGTa < 2:589387/150‑1 (MQ=255) gCCTTCCGCGTCTAAATCTAATGCCTGACAACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTACGACACTTCCGGCATATCGGAATCGCTTAAAATCGAGAACGCCAGCGTTTGTaa > 1:597542/1‑150 (MQ=255) ttCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGc > 1:1146015/1‑150 (MQ=255) tCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGCg > 2:1264973/1‑150 (MQ=255) tCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGCg > 2:719150/1‑150 (MQ=255) cgcgTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGCGTc > 2:312924/1‑150 (MQ=255) cgTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGCGTCGc > 2:155370/1‑150 (MQ=255) tCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGCGTCGCCa > 2:1694654/1‑150 (MQ=255) aaaTCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCTTTTGTAAAGCGTCGCCAGCg > 2:737036/1‑150 (MQ=255) aaaTCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGCGTCGCCAGCg < 2:788257/150‑1 (MQ=255) aTCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGCGTCGCCAGCgag > 2:183463/1‑150 (MQ=255) tAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGCGTCGCCAGCGAGAAt < 1:978488/150‑1 (MQ=255) gCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCatat < 2:164483/91‑1 (MQ=255) gCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCatat > 1:164483/1‑91 (MQ=255) ccTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGTCACTTCCGGCATATCGGCTTCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGCGTCGCCAGCGAGAATCGCGt > 1:1297364/1‑150 (MQ=255) ccTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGCGTCGCCAGCGAGAATCGCGt > 1:1219832/1‑150 (MQ=255) tGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGCGTCGCCAGCGAGAATCGCGttt < 1:454430/150‑1 (MQ=255) gACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGAGTCGCCAGCGAGAATCGCGTTTg < 1:168728/150‑1 (MQ=255) ccaccGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGCGTCGCCAGCGAGAATCGCGTTTGCt > 1:451028/1‑150 (MQ=255) accGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGCGTCGCCAGCGAGAATCGCGTTTGCTTc < 2:1146015/150‑1 (MQ=255) ccGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGCGTCGCCAGCGAGAATCGCGTTTGCTTCg > 2:843414/1‑150 (MQ=255) ccGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGCGTCGCCAGCGAGAATCGCGTTTGCTTCg > 2:1561215/1‑150 (MQ=255) cGCACATTCCGGCATTACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCGTAAAATCGAGAACGCCAGCGTTTGTAAAGCGTCGCCAGCGAGAATCGCGTTTGCTTCGc < 2:1840166/150‑1 (MQ=255) gCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGCGTCGCCAGCGAGAATCGCGTTTGCTTCGcc > 2:802850/1‑150 (MQ=255) caTTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGCGTCGCCAGCGAGAATCGCGTTTGCTTCGCCaaa > 2:585881/1‑150 (MQ=255) aTTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGCGTCGCCAGCGAGAATCGCGTTTGCTTCGCCAAAc < 1:1828692/150‑1 (MQ=255) aTTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGGCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGCGTCGCCAGCGAGAATCGCGTTTGCTTCGCCAAAc < 1:1611657/150‑1 (MQ=255) ttCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGCGTCGCCAGCGAGAATCGCGTTTGCTTCGCCAAACt < 1:1542687/150‑1 (MQ=255) ccGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGCGTCGCCAGCGAGAATCGCGTTTGCTTCGCCAAACTTc < 1:312924/150‑1 (MQ=255) ccGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGCGTCGCCAGCGAGAATCGCGTTTGCTTCGCCAAACTTc < 1:843414/150‑1 (MQ=255) ccGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGCGTCGCCAGCGAGAATCGCGTTTGCTTCGCCAAACTTc > 2:1061033/1‑150 (MQ=255) ccGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGCGTCGCCAGCGAGAATCGCGTTTGCTTCGCCAAACTTc < 2:1165939/150‑1 (MQ=255) ggCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGATCGCCAGCGTTTGTAAAGCGTCGCCAGCGAGAATCGCGTTTGCTTCGCCAAACTTcac < 2:398095/150‑1 (MQ=255) ctgaaCTGGCGAGCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATAGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGCGTCGCCAGCGAGAATCGCGTTTGCTTCGCCAAACTTCACATGGc > 2:1620559/5‑150 (MQ=255) aCCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGCGTCGCCAGCGAGAATCGCGTTTGCTTCGCCAAACTTCACATGGCa > 1:89898/1‑150 (MQ=255) gaaCTGGCGAGCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGCGTCGCCAGCGAGAATCGCGTTTGCTTCGCCAAACTTCACATGGCAg > 1:1950560/3‑150 (MQ=255) ccACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGCGTCGCCAGCGAGAATCGCGTTTGCTTCGCCAAACTTCACATGGCAg > 1:1546180/1‑150 (MQ=255) cACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGCGTCGCCAGCGAGAATCGCGTTTGCTTCGCCAAACTTCACATGGCAgg < 1:755398/150‑1 (MQ=255) ggCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGCGTCGCCAGCGAGAATCGCGTTTGCTTCGCCAAACt > 1:373021/1‑134 (MQ=255) ggCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGCGTCGCCAGCGAGAATCGCGTTTGCTTCGCCAAACt < 2:373021/134‑1 (MQ=255) cgcTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGCGTCGCCAGCGAGAATCGCGTTTGCTTCGCCAAACTTCACATGGCAGGTTGGCa < 1:585881/150‑1 (MQ=255) | CTTAATGCACCAAGGCGAACGGCGGCGCGAATCAATGCGCCGGTTTTATGACGATGAATACGCTCAAGCGCGTCCAGAGGTACGTGTTTGCCTTCCGCGTCTAAATCTAATGCCTGACCACCGCACATTCCGGCAATACCACTGGCGCTCGCCAGTTCAGAAATCATCGAAATTCTGTCGCGGTCCGACACTTCCGGCATATCGGCATCGCTTAAAATCGAGAACGCCAGCGTTTGTAAAGCGTCGCCAGCGAGAATCGCGTTTGCTTCGCCAAACTTCACATGGCAGGTTGGCA > NC_000913/440515‑440809 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |