| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,947,049 | A→T | 6.1% | intergenic (+17/+79) | trpT → / ← hdfR | tRNA‑Trp/DNA‑binding transcriptional dual regulator HdfR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,947,049 | 0 | A | T | 6.1% | 992.2 / 32.6 | 305 | intergenic (+17/+79) | trpT/hdfR | tRNA‑Trp/DNA‑binding transcriptional dual regulator HdfR |
| Reads supporting (aligned to +/- strand): ref base A (148/138); new base T (8/11); total (156/149) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.82e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 308 total aligned reads displayed.
TGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATCGCGAATCAACGCATTTTTATCGCTATTTTGCA > NC_000913/3946901‑3947198 | cGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCTTTCGCTAAGGa < 2:565327/150‑1 (MQ=255) cGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGa < 1:932153/150‑1 (MQ=255) cAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCTTTCGCTAAGGA‑tg < 1:1842974/150‑2 (MQ=255) cAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCTTTCGCTAAGGA‑tg < 1:1313767/150‑2 (MQ=255) gggggTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑tttt > 2:1926862/1‑150 (MQ=255) ggggTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGTGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCTTTCGCTAAGGA‑tgatt < 2:1075400/150‑5 (MQ=255) tCGCGGGTTCGAGTCCCGTCCGTTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTa < 2:693984/150‑1 (MQ=255) gcgGGTTCGAGTCCCGTCCGTTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATc > 1:377749/1‑150 (MQ=255) cgGGTTCGAGTCCCGTCCGTTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCt > 2:831550/1‑150 (MQ=255) gggTTCGAGTCCCGTCCGTTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTg < 1:1651533/150‑1 (MQ=255) gggTTCGAGTCCCGTCCGTTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTg < 1:820657/150‑1 (MQ=255) ggTTCGAGTCCCGTCCGTTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGa > 2:1126753/1‑150 (MQ=255) ggTTCGAGTCCCGTCCGTTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGa < 2:1639979/150‑1 (MQ=255) ggTTCGAGTCCCGTCCGTTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGa > 1:1613755/1‑150 (MQ=255) gTTCGAGTCCCGTCCGTTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGaa < 2:746234/150‑1 (MQ=255) gTTCGAGTCCCGTCCGTTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGaa < 2:1504191/150‑1 (MQ=255) tCGAGTCCCGTCCGTTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAAt > 2:621176/1‑150 (MQ=255) aGTCCCGTCCGTTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAAc > 1:194561/1‑150 (MQ=255) gTCCCGTCCGTTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAAcc < 2:1221520/150‑1 (MQ=255) tCCCGTCCGTTCCGCCACCCTAATTAGGGGCGTAGTTCAATTTGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGTAGTTGGAGTCTCTCCGCCCCTGGCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAAccc < 2:1081803/150‑1 (MQ=255) ccgtccgtTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCctc > 2:1667883/1‑150 (MQ=255) ccgtccgtTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCctc > 1:1754681/1‑150 (MQ=255) gtccgtTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCtctc > 1:1643990/1‑150 (MQ=255) cgtTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCg > 1:877285/1‑150 (MQ=255) cgtTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGa > 1:214664/1‑150 (MQ=255) ccGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTa < 2:1303979/150‑1 (MQ=255) cACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATc < 2:1573425/150‑1 (MQ=255) aCCCTAATTAGGGGCTTAGTTGAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGGTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCAGAAGTAAATcc < 2:26294/150‑1 (MQ=255) aCCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGCGGCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAACGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATcc > 2:650881/1‑150 (MQ=255) cccTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCt < 1:1820032/150‑1 (MQ=255) cccTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCt > 2:182935/1‑150 (MQ=255) aGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCgg < 1:1381419/150‑1 (MQ=255) aGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCgg > 2:1456784/1‑150 (MQ=255) ggggCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGc < 1:735525/150‑1 (MQ=255) ggggCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGc > 1:777983/1‑150 (MQ=255) gggCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCa > 2:680422/1‑150 (MQ=255) ggCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCAt > 1:1443619/1‑150 (MQ=255) ggCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCAt > 2:1913255/1‑150 (MQ=255) ggTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATcc < 2:1613755/149‑1 (MQ=255) aaTTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTgccagc > 1:681319/1‑150 (MQ=255) aaTTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTgccagc < 2:179030/150‑1 (MQ=255) aaTTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTgccagc < 1:1178041/150‑1 (MQ=255) tGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATACCCCGCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCAt > 1:1713715/1‑150 (MQ=255) ggTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCAtt < 1:353910/150‑1 (MQ=255) ggTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCAtt < 1:15930/150‑1 (MQ=255) gTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTc < 2:1028680/150‑1 (MQ=255) gagCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCata < 2:775092/150‑1 (MQ=255) agCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCatat < 1:621176/150‑1 (MQ=255) cACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTa < 2:1734865/150‑1 (MQ=255) aCCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTaa < 1:79897/150‑1 (MQ=255) ggTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAATGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATac < 2:812587/150‑1 (MQ=255) ggTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATac > 1:429847/1‑150 (MQ=255) gTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATaca < 1:139092/150‑1 (MQ=255) ctcCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACt > 1:1476683/1‑150 (MQ=255) ctcCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACt > 1:1276331/1‑150 (MQ=255) tcCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACtt > 2:1777009/1‑150 (MQ=255) tcCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACtt > 1:968288/1‑150 (MQ=255) ccAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACtta > 1:628523/1‑149 (MQ=255) ccAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTc > 2:95171/1‑150 (MQ=255) ccAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTc > 1:1628122/1‑150 (MQ=255) ccAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTc > 1:1798824/1‑150 (MQ=255) ccAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTc < 1:1456784/150‑1 (MQ=255) aaaaCCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCAt > 2:1152379/1‑150 (MQ=255) aCCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCa < 1:1421950/150‑1 (MQ=255) cGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGc > 2:1821547/1‑150 (MQ=255) gggTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCa < 2:1412681/150‑1 (MQ=255) gggTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCa < 1:892857/150‑1 (MQ=255) ttGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCATTAGCGAAAGCTAAGGATTTTTTTTTATCTGAAATAACCCTCTCCGAAGTAATTCGTTGTACCGGCATCCTTGCCAGCCATTCATTTTAATACACTTCATAGAGAACGtt > 1:1524506/1‑150 (MQ=255) gggAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAAt > 2:100079/1‑150 (MQ=255) gAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATACTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAAttt > 2:913875/1‑150 (MQ=255) aGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAAtttt < 1:1022065/150‑1 (MQ=255) aGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAAtttt < 2:214664/150‑1 (MQ=255) ttCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCa < 1:332911/150‑1 (MQ=255) tCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCaa > 1:1575892/1‑150 (MQ=255) cGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCaaa > 2:1897342/1‑150 (MQ=255) cGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCaaa > 1:1155109/1‑150 (MQ=255) cGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCaaa > 2:445670/1‑150 (MQ=255) gAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCaaaa > 1:248665/1‑150 (MQ=255) aGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAg < 2:1536298/150‑1 (MQ=255) ctctcCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATc > 1:55040/1‑150 (MQ=255) ctctcCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATc > 2:533473/1‑150 (MQ=255) ctcCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATcgc < 1:475011/150‑1 (MQ=255) tcCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATcgcg < 2:1175904/150‑1 (MQ=255) ccGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAATGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATCGCGa < 2:246801/150‑1 (MQ=255) ccGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATCGCGa > 2:1984035/1‑150 (MQ=255) ccGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATCGCGa > 2:599036/1‑150 (MQ=255) gCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATCGCGAAt < 2:1754681/150‑1 (MQ=255) ccccTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATCGCGAATc > 2:314563/1‑150 (MQ=255) ccccTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATCGCGAATc > 1:1111734/1‑150 (MQ=255) ccccTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATCGCGAATc < 1:600545/150‑1 (MQ=255) aG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATCGCGAATCAACGCAtt < 2:968717/150‑1 (MQ=255) aaaaatcCTTAGCTTTCGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATCGCGAATCAACGCAttttt > 1:1547204/5‑150 (MQ=255) aaTCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATCGCGAATCAACGCAttttt < 2:429847/150‑1 (MQ=255) atcatcCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATCGCGAATCAACGCATTTTTa > 1:1079769/1‑150 (MQ=255) atcCTTAGCTTTCGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATCGCGAATCAACGCATTTTTATCg > 2:137393/1‑150 (MQ=255) cTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATCGCGAATCAACGCATTTTTATCGCTa < 1:1932372/150‑1 (MQ=255) gCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAAt > 1:669801/1‑87 (MQ=255) gCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATCGCGAATCAACGCATTTTTATCGCTAtttt < 1:1095449/150‑1 (MQ=255) gAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATCGCGAATCAACGCATTTTTATCGCTATTTTGc > 1:1236417/1‑150 (MQ=255) aaaGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATCGCGAATCAACGCATTTTTATCGCTATTTTGCa < 2:877285/150‑1 (MQ=255) | TGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAG‑AAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATCGCGAATCAACGCATTTTTATCGCTATTTTGCA > NC_000913/3946901‑3947198 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |