| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 236 | C→G | 7.4% | T16R (ACA→AGA) ‡ | thrL → | thr operon leader peptide |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 236 | 0 | C | G | 7.4% | 307.2 / 11.3 | 94 | T16R (ACA→AGA) ‡ | thrL | thr operon leader peptide |
| Reads supporting (aligned to +/- strand): ref base C (38/48); new base G (4/3); total (42/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.97e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.44e-01 | |||||||||||
CCGTGAGTAAATTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAGTGGCAAATGCAGAACGT > NC_000913/89‑384 | ccGTGAGTAAATTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAg < 2:1322936/150‑1 (MQ=255) cGTGAGTAAATTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAgg < 2:797219/150‑1 (MQ=255) cGTGAGTAAATTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACAAATATCGGCAAAGCGCACAGAAAGATAAAAATTACAGAG‑ACCCAACCAACAATGAAACGCATAAGCCCCA‑CAATACCACCCCCAAACACCATTACCCCAgg > 2:1706893/1‑150 (MQ=255) gTGAGTAAATTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGt < 2:853614/150‑1 (MQ=255) gTAAATTAAAATTTTATTGACATAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACg > 2:376886/1‑150 (MQ=255) aaTTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTg < 2:1148891/150‑1 (MQ=255) aaaaTTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCggg > 2:742850/1‑150 (MQ=255) aaaaTTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCggg < 2:592827/150‑1 (MQ=255) aaaTTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGc < 2:1138384/150‑1 (MQ=255) aaaTTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGc > 1:1529586/1‑150 (MQ=255) aaaTTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGc < 2:1529586/150‑1 (MQ=255) aaTTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCt < 1:1928434/150‑1 (MQ=255) aTTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCGTTACCTGTGGTAATGGTgatggtgg < 1:1157967/150‑8 (MQ=255) ttATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGAcg < 1:1564465/150‑1 (MQ=255) ttATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGAcg > 2:1320112/1‑150 (MQ=255) ttGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGt > 1:1124203/1‑150 (MQ=255) tGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTa < 2:225536/150‑1 (MQ=255) taCTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTAc < 1:1706111/149‑1 (MQ=255) gACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTAc < 2:1109292/150‑1 (MQ=255) gACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTAc < 2:1274149/150‑1 (MQ=255) cTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAg > 2:1706531/1‑150 (MQ=255) tAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGa > 1:1012627/1‑150 (MQ=255) ggTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGaaa < 1:33693/150‑1 (MQ=255) gTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAac > 1:1934052/1‑150 (MQ=255) cACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAacac > 2:228759/1‑150 (MQ=255) aCTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAAcaca < 1:742850/150‑1 (MQ=255) aaTACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGaaa < 1:936081/150‑1 (MQ=255) aCTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGaaaaaa > 1:377061/1‑150 (MQ=255) aaCCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCg > 2:1157326/1‑150 (MQ=255) aaCCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCg < 2:844475/150‑1 (MQ=255) aaTATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCAcc < 1:1621302/150‑1 (MQ=255) atatAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCt < 1:341304/150‑1 (MQ=255) ataGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGa < 1:1706531/150‑1 (MQ=255) aGGCATAGCGGACAGACAGATAATCATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCGGCACGTGACa < 2:589565/150‑1 (MQ=255) ggCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑g < 1:1153533/150‑1 (MQ=255) gCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑Gt > 2:417454/1‑150 (MQ=255) tAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCg < 2:539388/150‑1 (MQ=255) aGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCgg < 1:1706893/150‑1 (MQ=255) gcgcACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCggg < 2:377061/150‑1 (MQ=255) gcgcACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCggg < 1:9577/150‑1 (MQ=255) cgcACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGc < 1:795461/150‑1 (MQ=255) gcACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCt > 2:1750663/1‑150 (MQ=255) gcACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCt > 2:1819514/1‑150 (MQ=255) gcACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCA‑CTGTCAGGTGCGGGCt < 1:1268524/150‑1 (MQ=255) acagacagATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCA‑CTGTCAGGTGCGGGCttt < 2:596582/150‑1 (MQ=255) acagacagATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCA‑CTGTCAGGTGCGGGCttt < 2:336931/150‑1 (MQ=255) gacagaTAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCtttttt < 2:1012627/150‑1 (MQ=255) cacagaTAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCtttttt < 2:507391/149‑1 (MQ=255) aagaTAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCtttttttt < 1:654820/149‑1 (MQ=255) gaTAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTc > 2:1641924/1‑150 (MQ=255) aTAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCg < 1:376886/150‑1 (MQ=255) aTAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCA‑CTGTCAGGTGCGGGCttttttctgtg < 2:274380/150‑6 (MQ=39) tAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGa > 2:1011220/1‑150 (MQ=255) tAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGa > 1:509279/1‑150 (MQ=255) ttACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAg > 1:1649871/1‑150 (MQ=255) aCAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGt > 1:96653/1‑150 (MQ=255) aagagTACACAA‑CATCCATGAAACTCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTa < 2:1584334/149‑1 (MQ=255) gagTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAAc > 2:825999/1‑150 (MQ=255) cacaA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTTTTTTTCGACCAAAGGTAACGAGGTa > 2:37558/1‑150 (MQ=255) acaa‑caTCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTa < 2:1551133/150‑1 (MQ=255) acaa‑caTCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTa < 1:1750663/150‑1 (MQ=255) caa‑caTCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTaa > 1:1721555/1‑150 (MQ=255) caa‑caTCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTCACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTCACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTaa > 1:1726450/1‑150 (MQ=255) tCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTAACAAcc > 2:1424970/1‑150 (MQ=255) tCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCAGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTAACAAcc > 2:1927946/1‑150 (MQ=255) cATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTAACAACCAt > 2:575078/1‑150 (MQ=255) cATTAGCACCACCATTACCACCACC‑ATCACCATAACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGtt < 1:826125/150‑1 (MQ=255) aTTAGCACCACCATCACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTg < 1:1593614/150‑1 (MQ=255) ttAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGa < 1:1819514/150‑1 (MQ=255) accaccATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTc > 2:979354/1‑150 (MQ=255) ttACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTa < 1:575078/150‑1 (MQ=255) tACCACCACA‑ATCACAATTACCACAGGTAAGGGTGCGGGCTTACGCGTAAAGGAAACACAGAAAAATGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCATAGGTAACGAGGTAACAACCATTCGAGTGTTGAAGTTCGGCGGTAc < 2:1726450/150‑1 (MQ=255) ccaccacc‑aTCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACAt > 1:1001933/1‑150 (MQ=255) caccacc‑aTCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATc < 1:1424970/150‑1 (MQ=255) ccacc‑aTCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAg > 1:1464608/1‑150 (MQ=255) ccacc‑aTCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAg > 2:1103057/1‑150 (MQ=255) acc‑atcaccatTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAGTg < 1:539022/150‑1 (MQ=255) acc‑atcaccatTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAGTg < 2:1471284/150‑1 (MQ=255) acc‑atcaccacTACCAAAGGCAACGCTGCGGTCTGACGCGTACAGGAAACACATAAAAAAGCCCGCACCTGACA‑GTGCGTGCTTTTTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAGTg < 2:1203064/150‑1 (MQ=255) cc‑atcaccatTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAGTgg > 1:795322/1‑150 (MQ=255) ccgcaccgtTACCTGTGGTAATGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAGTGGc > 1:1963512/4‑150 (MQ=255) atcaccatTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAGTGGCa > 2:500498/1‑150 (MQ=255) caccgtTACCTGTGGTAATGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAGTGGCaaa > 1:1162548/1‑150 (MQ=255) caccgtTACCTGTGGTAATGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAGTGGCa > 2:1804288/1‑148 (MQ=255) caccgtTACCTGTGGTAATGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAGTGGCa > 2:1797012/1‑148 (MQ=255) caccgtTACCTGTGGTAATGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAGTGGCa < 1:1804288/148‑1 (MQ=255) caccgtTACCTGTGGTAATGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAGTGGCa < 1:1797012/148‑1 (MQ=255) caccatTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAGTGGCaaa > 2:750094/1‑150 (MQ=255) catTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAGTGGCAAATGc < 2:1934052/150‑1 (MQ=255) tACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAGTGGCAAATGCAGa < 1:825999/150‑1 (MQ=255) aCCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAGTGGCAAATGCAGaa > 2:83357/1‑150 (MQ=255) aCCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAGTGGCAAATGCAGaa > 1:433073/1‑150 (MQ=255) aCCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAGTGGCAAATGCAGaa > 1:528900/1‑150 (MQ=255) ccACAGGTAACTGTGCGGGCTGACGCGTACAGGAAACAAAGAAAAAAGCCAGCACCTCACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAGTGGCAAATGCAGAAc > 2:1696619/1‑150 (MQ=255) acaGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAGTGGCAAATGCAGAACGt > 1:1457421/1‑150 (MQ=255) | CCGTGAGTAAATTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAA‑CATCCATGAAACGCATTAGCACCACCATTACCACCACC‑ATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTTTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAGTGGCAAATGCAGAACGT > NC_000913/89‑384 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |