| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 985,853 | C→T | 5.6% | intergenic (‑144/+41) | aspC ← / ← ompF | aspartate aminotransferase/outer membrane porin F |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 985,853 | 0 | C | T | 5.6% | 333.7 / 5.5 | 107 | intergenic (‑144/+41) | aspC/ompF | aspartate aminotransferase/outer membrane porin F |
| Reads supporting (aligned to +/- strand): ref base C (45/54); new base T (2/4); total (48/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.89e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.45e-01 | |||||||||||
Only 100 of 109 total aligned reads displayed.
AAACATGACGAGGTTCCATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTT > NC_000913/985704‑986002 | aaaCATGACGAGGTTCCATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGAcc < 2:1628635/150‑1 (MQ=255) tGACGAGGTTCCATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑Gt > 1:1655010/1‑150 (MQ=255) atagtttCCATTATTGTTACAGAAGGGAAGTCCGCTATAATGGTAATTTTAGATTTACATATTTCCAACTATTTCTGATTAAATTGAATTCTTTTTTTTCAAGATGTGTGATTTCTCTGGAATGTATAAAAAAAATAGGACAAAA‑GTCCt < 2:1125062/145‑1 (MQ=255) gAGGTTCCATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTg < 1:898410/150‑1 (MQ=255) gAGGTTCCATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTg < 2:128945/150‑1 (MQ=255) aGGTTCCATTATGGTTACAGTAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGt < 1:788898/150‑1 (MQ=255) gTTCCATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTcc > 1:518302/1‑145 (MQ=255) gTTCCATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTcc < 2:518302/145‑1 (MQ=255) ttCCATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGtttt > 2:1619413/1‑150 (MQ=255) tCCATTATGGTTACAGAAGCGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGttttt > 1:375728/1‑150 (MQ=255) ccATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGtttttt > 1:1223276/1‑150 (MQ=255) cATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGCCGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTc > 1:1838323/1‑150 (MQ=255) cATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACTTTG‑GTCCTGttttttt < 2:1822899/150‑2 (MQ=255) aTTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACTCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAATGTATAAAAAAAACAGGACTTTG‑GTCCTGtttttttt < 2:805866/150‑3 (MQ=255) aTTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACTTTG‑GTCCTGtttttttt < 1:844619/150‑3 (MQ=255) aTTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCg < 2:1095359/150‑1 (MQ=255) aTTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCg < 2:1457427/150‑1 (MQ=255) tATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGc < 2:799859/150‑1 (MQ=255) tATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGc < 2:1506452/150‑1 (MQ=255) aTGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGGTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTATTTCGGCa > 2:1404603/1‑150 (MQ=255) tGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACATAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAA‑AGGGCCAAAGGGCGTGTTTTTTGGGctt > 1:1881770/1‑148 (MQ=255) gTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCAttt > 1:497730/1‑150 (MQ=255) aCAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAAc < 2:1193225/150‑1 (MQ=255) gAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACaaa > 1:432607/1‑150 (MQ=255) gggAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAagag < 2:1351736/150‑1 (MQ=255) ggAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAgg < 1:1461885/150‑1 (MQ=255) gAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGgt > 2:1338/1‑150 (MQ=255) aaGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAATACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGgtg < 2:375728/150‑1 (MQ=255) gTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGgt > 1:1650298/1‑147 (MQ=255) gTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGgt < 2:1650298/147‑1 (MQ=255) gTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGtgtg > 1:1821850/1‑150 (MQ=255) gTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACAAAA‑GTCATGTTTTTTCGGAATTTAAAAAAGAGGtgtg > 2:1225310/1‑150 (MQ=255) ccGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCt > 1:194570/1‑150 (MQ=255) ccGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCt < 2:1675823/150‑1 (MQ=255) aTCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAg < 2:497730/150‑1 (MQ=255) aTCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAg < 2:1390017/150‑1 (MQ=255) aTCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAg < 2:504860/150‑1 (MQ=255) cAGTGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGaa > 2:169688/1‑150 (MQ=255) gggTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACt < 1:1619413/150‑1 (MQ=255) gTAACTGGAGTTTTACAAAATTCCTACTATTACTTATGAAATCGCAGGGTGTTTTTGCAAGACTTGAGTTTGCTCTTGAAGGTATAAAAAATACAGGACCAAT‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTTCTATTAGAACTgg < 2:650787/150‑1 (MQ=255) tAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGt > 1:114242/1‑150 (MQ=255) aaCGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTa < 2:62866/150‑1 (MQ=255) aaCGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTa < 2:1049722/150‑1 (MQ=255) aCGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTaa > 2:1573029/1‑150 (MQ=255) gggAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAAc < 1:880786/150‑1 (MQ=255) gagaTTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGa > 1:1279417/1‑150 (MQ=255) agaTTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGAt > 1:1632645/1‑150 (MQ=255) gaTTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAGGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATa > 2:1486417/1‑150 (MQ=255) gaTTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATa < 2:1655010/150‑1 (MQ=255) tACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTa < 1:1649600/111‑1 (MQ=255) cAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCcaca > 1:68664/1‑150 (MQ=255) aaCTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGgtg < 2:970442/150‑1 (MQ=255) ttACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTgtcgtc < 2:737609/150‑1 (MQ=255) tgaAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCt > 1:316448/1‑150 (MQ=255) gaAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTa > 2:1422588/1‑150 (MQ=255) aaaCGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACg < 1:1573029/150‑1 (MQ=255) aaaCGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACg < 1:1877143/150‑1 (MQ=255) aaCGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGc < 2:316448/150‑1 (MQ=255) aGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGt > 1:577451/1‑150 (MQ=255) cTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTttg > 1:554815/1‑150 (MQ=255) tttttGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTttgttg > 1:224284/1‑150 (MQ=255) ttGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCa < 2:1998618/150‑1 (MQ=255) tGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAg > 2:207832/1‑150 (MQ=255) tGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGCGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAg < 2:320648/150‑1 (MQ=255) cAAGACGTGAGATTGCTCTGGAGGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGaa < 1:1486417/150‑1 (MQ=255) aGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATc < 1:1422588/150‑1 (MQ=255) aGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGATATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATc > 1:1896823/1‑150 (MQ=255) aGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGATATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATc > 1:1896827/1‑150 (MQ=255) gTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATc < 2:761602/150‑1 (MQ=255) gTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATc < 1:69704/150‑1 (MQ=255) tGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTttgttg < 1:529700/137‑1 (MQ=255) tGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTttgttg > 2:529700/1‑137 (MQ=255) tGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCt < 1:1565581/150‑1 (MQ=255) gagaTTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTg < 1:1198033/150‑1 (MQ=255) gagaTTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTg > 2:1784659/1‑150 (MQ=255) tGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTTGTCTGAACCTACGCCGAGTTTGTTGTCAGAATCGATCTGGTtga < 1:1406103/150‑1 (MQ=255) ctctGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTtgatg > 2:679453/1‑150 (MQ=255) tctGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTtgatga > 2:1308349/1‑150 (MQ=255) tctGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTtgatga < 1:1308349/150‑1 (MQ=255) ctGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTgatgat > 2:1993911/1‑150 (MQ=255) ctGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTgatgat > 2:768319/1‑150 (MQ=255) tGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGatgatg < 1:1155735/150‑1 (MQ=255) gggAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGatgatg < 2:1914350/149‑1 (MQ=255) ggAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCGCAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGt < 2:194570/150‑1 (MQ=255) ggAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGt < 2:1632645/150‑1 (MQ=255) ggAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGt < 2:577451/150‑1 (MQ=255) aGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGt < 2:1465949/150‑1 (MQ=255) ggTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTc < 2:68664/150‑1 (MQ=255) gTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCa < 1:1404603/150‑1 (MQ=255) tataAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCaa > 1:1091378/1‑150 (MQ=255) taAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACa > 1:1365887/1‑150 (MQ=255) aaaaaaaaCAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACAt > 2:826335/1‑150 (MQ=255) aaaaaCAGGACTTTG‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAgg > 1:1999501/1‑150 (MQ=255) aaaaaCAGGACTTTG‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAgg > 2:1083033/1‑150 (MQ=255) aaaaaCAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAgg < 1:679453/150‑1 (MQ=255) aaaCAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTg < 2:1279417/150‑1 (MQ=255) aaCAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTttgttg < 1:1650873/110‑1 (MQ=255) aaCAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTttgttg > 2:1650873/1‑110 (MQ=255) ggAACAAA‑GTCCTGTTTTTTAGGAATTTAAAAAAGAGTTGTTCTATTAGAACTGGTAAACGATAAAAACAGCAACGGTGTCGTCTGCACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACAt > 2:1766865/1‑150 (MQ=255) cAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGttt > 2:1654322/1‑150 (MQ=255) | AAACATGACGAGGTTCCATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAA‑GTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTT > NC_000913/985704‑986002 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |