| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,174,077 | G→A | 6.3% | intergenic (‑113/+15) | mfd ← / ← ycfT | transcription‑repair coupling factor/inner membrane protein YcfT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,174,077 | 0 | G | A | 6.3% | 295.2 / 4.3 | 93 | intergenic (‑113/+15) | mfd/ycfT | transcription‑repair coupling factor/inner membrane protein YcfT |
| Reads supporting (aligned to +/- strand): ref base G (39/48); new base A (4/2); total (43/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.10e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ACGGGCAGCGTATAACGATATTGTTCAGGCATAACGGTTGTCAGATTCTCGTTAGGATATGCCTCAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGTTTTCTTACCAGCAAGCCCGCAACAGTACAGATGAACAAACTGACAAAGGGATAAA > NC_000913/1173933‑1174222 | aCGGGCAGCGTATAACGATATTGTTCAGGCATAACGGTTGTCAGATTCTCGTTAGGATATGCCTCAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTgg < 2:1323449/150‑1 (MQ=255) gCAGCGTATAACGATATTGTTCAGGCATAACGGTTGTCAGATTCTCGTTAGGATATGCCTCAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCg > 1:637650/1‑150 (MQ=255) gCGTATAACGATATTGTTCAGGCATAACGGTTGTCAGATTCTCGTTAGGATATGCCTCAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑Tg < 2:1117632/150‑1 (MQ=255) gCGTATAACGATATTGTTCAGGCATAACGGTTGTCAGATTCTCGTTAGGATATGCCTCAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑Tg > 1:1934231/1‑150 (MQ=255) cGTATAACGATATTGTTCAGGCATAACGGTTGTCAGATTCTCGTTAGGATATGCCTCAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCAGCCGGGGCGA‑ttc < 1:1508087/150‑3 (MQ=255) cGTATAACGATATTGTTCAGGCATAACGGTTGTCAGATTCTCGTTAGGATATGCCTCAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCAGCCGGGGCGA‑ttc < 1:1619992/150‑3 (MQ=255) cGATATTGTTCAGGCATAACGGTTGTCAGATTCTCGTTAGGATATGCCTGAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCg < 1:165602/150‑1 (MQ=255) cGATATTGTTCAGGCATAACGGTTGTCAGATTCTCGTTAGGATATGCCTCAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCg < 1:440032/150‑1 (MQ=255) atatTGTTCAGGCATAACGGTTGTCAGATTCTCGTTAGGATATGCCTCAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCggg < 1:1281201/150‑1 (MQ=255) tGTTCAGGCATAACGGTTGTCAGATTCTCGTTAGGATATGCCTCAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTa < 2:1147024/150‑1 (MQ=255) tGTTCAGGCATAACGGTTGTCAGATTCTCGTTAGGATATGCCTCAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTa > 1:1725827/1‑150 (MQ=255) ttCAGGCATAACGGTTGTCAGATTCTCGTTAGGATATGCCTCAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAAc > 1:1674524/1‑150 (MQ=255) tCAGGCATAACGGTTGTCAGATTCTCGTTAGGATATGCCTCAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACt < 1:1864667/150‑1 (MQ=255) cAGGCATAACGGTTGTCAGATTCTCGTTAGGATATGCCTCAACATATGGCGGCATATCTCTTATAAGCAATGCGGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTg > 2:1610200/1‑150 (MQ=255) ggCATAACGGTTGTCAGATTCTCGTTAGGATATGCCTCAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGAc > 1:1503499/1‑150 (MQ=255) cATAACGGTTGTCAGATTCTCGTTAGGATATGCCTCAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACgg > 2:120355/1‑150 (MQ=255) aCGGTTGTCAGATTCTCGTTAGGATATGCCTCAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGc < 1:328742/150‑1 (MQ=255) gTTGTCAGATTCTCGTTAGGATATGCCTCAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCggg < 2:1428357/150‑1 (MQ=255) tcggATTCTCGTTAGGATATGCCTCAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGt > 1:1680580/4‑150 (MQ=255) cAGATTCTCGTTAGGATATGCCTCAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTg < 1:788446/150‑1 (MQ=255) cAGATTCTCGTTAGGATATGCCTCAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTg < 1:1878186/150‑1 (MQ=255) aGATTCTCGTTAGGATATGCCTCAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGa > 2:1750874/1‑150 (MQ=255) aGATTCTCGTTAGGATATGCCTCAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGa < 2:1823014/150‑1 (MQ=255) aGATTCTCGTTAGGATATGCCTCAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGa < 2:1830298/150‑1 (MQ=255) ctcGTTAGGATATGCCTCAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCg > 2:1608602/1‑150 (MQ=255) tcGTTAGGATATGCCTCAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCgg > 2:563301/1‑150 (MQ=255) cGTTAGGATATGCCTCAACATATGGGGGCATATCTCTGATAAGCAAAGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGAAACTGACGGCAGCGGGCAGTGAAGGCggg > 2:636900/1‑150 (MQ=255) gTTAGGATATGCCTCAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCTTAATCGACATGGTTTAGCAAATTGAATCGCCCCGTCGGGGGCGA‑TGGCTTAGCGCGAGTTACTGACGGCAGCGGGCAGTGAAGGCgggg < 2:674729/150‑1 (MQ=255) gTTAGGATATGCCTCAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCGAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCgggg > 1:1463249/1‑150 (MQ=255) gTTAGGATATGCCTCAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCgggg < 2:1718300/150‑1 (MQ=255) ttAGGATATGCCTCAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGATTCAATTTGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCgggg < 2:347899/150‑1 (MQ=255) tAGGATATGCCTCAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGgag < 2:637650/150‑1 (MQ=255) atatGCCTCAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGaaca < 1:1949806/150‑1 (MQ=255) tGCCTCAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAacaaca > 1:362335/1‑150 (MQ=255) tGCCTCAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAacaaca < 1:247479/150‑1 (MQ=255) aaCATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGc > 1:919082/1‑150 (MQ=255) tatGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGaa > 1:103498/1‑150 (MQ=255) tatGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGaa < 2:802000/150‑1 (MQ=255) tatGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGaa < 2:1701061/150‑1 (MQ=255) tGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATg > 1:655650/1‑150 (MQ=255) tGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATg < 2:1934231/150‑1 (MQ=255) cATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCt > 2:533435/1‑150 (MQ=255) tctcTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGTGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGAGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGa > 1:819423/1‑150 (MQ=255) ctctGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGaa > 2:52752/1‑150 (MQ=255) ctctGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGaa < 1:1281737/150‑1 (MQ=255) ctctGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGaa > 2:932891/1‑150 (MQ=255) ctGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAg < 2:99947/150‑1 (MQ=255) ctGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAg < 2:1725827/150‑1 (MQ=255) ctGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAg > 2:199112/1‑150 (MQ=255) ctGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAg < 1:1067649/150‑1 (MQ=255) gATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAAt < 2:1362369/134‑1 (MQ=255) gATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAAt > 1:1362369/1‑134 (MQ=255) gATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATg > 1:74033/1‑135 (MQ=255) gATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATg < 2:74033/135‑1 (MQ=255) gATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGtt > 1:1584714/1‑150 (MQ=255) tAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGtttt > 1:926454/1‑150 (MQ=255) aGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGTTTTCt > 2:189113/1‑150 (MQ=255) cAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGTTTTCTTa < 1:618416/150‑1 (MQ=255) aTGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGTTTTCTTAcc < 1:1742303/150‑1 (MQ=255) aTGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGTTTTCTTAcc < 1:533435/150‑1 (MQ=255) tGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGTTTTCTTACCa < 2:655650/150‑1 (MQ=255) gCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGTTTTCTTACCAg < 2:1557877/150‑1 (MQ=255) gCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGTTTTCTTACCAg < 2:1565221/150‑1 (MQ=255) gCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGTTTTCTTACCAg > 1:656664/1‑150 (MQ=255) gCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGTTTTCTTACCAg < 2:1825332/150‑1 (MQ=255) cATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGTTTTCTTACCAGCAAGcc > 2:931678/1‑150 (MQ=255) cATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGTTTTCTTACCAGCAAGcc > 1:237303/1‑150 (MQ=255) aTCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCGGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAAAGCACGCTGTGAAAGTTTTCTTACCAGCAAGCCCGCa < 2:1502830/150‑1 (MQ=255) aTCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGTTTTCTTACCAGCAAGCCCGCa > 1:1785027/1‑150 (MQ=255) aTCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑GGGCCTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAAAGCACGCTGGGAAAGTTTTCTTACCAGCAAGCCCGCa < 2:1502836/150‑1 (MQ=255) cGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCgggg > 2:1515277/1‑91 (MQ=255) cGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCgggg < 1:1515277/91‑1 (MQ=255) gTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGTTTTCTTACCAGCAAGCCCGCAACAg < 2:1174411/150‑1 (MQ=255) gTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGTTTTCTTACCAGCAAGCCCGCAACAg < 2:1001013/150‑1 (MQ=255) gTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGTTTTCTTACCAGCAAGCCCGCAACAg < 2:1503499/150‑1 (MQ=255) tAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGTTTTCTTACCAGCAAGCCCGCAACAGt > 2:1832857/1‑150 (MQ=255) aaTCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGTAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGTTTTCTTACCAGCAAGCCCGCAACAGTa > 2:838433/1‑150 (MQ=255) aaTCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGTTTTCTTACCAGCAAGCCCGCAACAGTa > 2:1197301/1‑150 (MQ=255) cGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGTTTTCTTACCAGCAAGCCCGCAACAGTACAg < 2:1785027/150‑1 (MQ=255) cATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGTTTTCTTACCAGCAAGCCCGCAACAGTACAGATg < 2:1674524/150‑1 (MQ=255) tGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGTTTTCTTACCAGCAAGCCCGCAACAGTACAGATGaa < 1:324484/150‑1 (MQ=255) aGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGTTTTCTTACCAGCAAGCCCGCAACAGTACAGATGAACAAACt < 1:563301/150‑1 (MQ=255) aaTTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGTTTTCTTACCAGCAAGCCCGCAACAGTACAGATGAACAAACTGACa > 1:1188351/1‑150 (MQ=255) agccaTCGCCCCAGCCGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGTTTTCTTACCAGCAAGCCCGCAACAGTACAGATGAACAAACTGACaaa > 2:762657/5‑150 (MQ=255) gccaTCGCCCCAGCCGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACCACAGATCGCTGAATGCCCGCTGTGAAAGTTTTCTTACCAGCAAGCCCGCAACAGTACAGATGAACAACCTGACAAAg > 1:755226/4‑150 (MQ=255) gccaTCGCCCCAGCCGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGTTTTCTTACCAGCAAGCCCGCAACAGTACAGATGAACAAACTGACAAAg > 1:53398/4‑150 (MQ=255) gAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGTTTTCTTACCAGCAAGCCCGCAACAGTACAGATGAACAAACTGACAAAgg < 2:926454/150‑1 (MQ=255) aaTCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACATCAGATCGCTGAATGCACGCTGTGAAAGTTTTCTTACCAGCAAGCCCGCAACAGTACAGATGAACAAACTGACAAAggg < 2:1892839/150‑1 (MQ=255) aTCGCCCCAGCCGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGTTTTCTTACCAGCAAGCCCGCAACAGTACAGATGAACAAACTGACAAAGGGa > 2:61202/1‑150 (MQ=255) cGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGTTTTCTTACCAGCAAGCCCGCAACAGTACAGATGAACAAACTGACAAAGGGATa > 1:911075/1‑150 (MQ=255) gCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAATGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGTTTTCTTACCAGCAAGCCCGCAACAGTACAGATCAACAAACTGACAAAGGGATaa > 1:152869/1‑150 (MQ=255) ccccGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGTTTTCTTACCAGCAAGCCCGCAACAGTACAGATGAACAAACTGACAAAGGGATaaa < 1:1832857/150‑1 (MQ=255) ccccGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGTTTTCTTACCAGCAAGCCCGCAACAGTACAGATGAACAAACTGACAAAGGGATaaa > 1:424907/1‑150 (MQ=255) | ACGGGCAGCGTATAACGATATTGTTCAGGCATAACGGTTGTCAGATTCTCGTTAGGATATGCCTCAACATATGGGGGCATATCTCTGATAAGCAATGCTGTTCATTATCCGTAATCGACATGGTTTAGCAAATTGAATCGCCCCGGCTGGGGCGA‑TGGCTTAGCGGGAGTAACTGACGGCAGCGGGCAGTGAAGGCGGGGAGAACAACAGATCGCTGAATGCACGCTGTGAAAGTTTTCTTACCAGCAAGCCCGCAACAGTACAGATGAACAAACTGACAAAGGGATAAA > NC_000913/1173933‑1174222 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |