| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,321,432 | A→T | 6.4% | A505A (GCT→GCA) | trpE ← | anthranilate synthase subunit TrpE |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,321,432 | 0 | A | T | 6.4% | 345.7 / 10.1 | 110 | A505A (GCT→GCA) | trpE | anthranilate synthase subunit TrpE |
| Reads supporting (aligned to +/- strand): ref base A (46/57); new base T (5/2); total (51/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.46e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.84e-01 | |||||||||||
Only 100 of 110 total aligned reads displayed.
TGCGGTAAATCACCACGTTATGCCCATTGCTGCGCAACTGATCTGCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGTTTTCCACCAGCGCCGAGCGGATCACAATGCAGGTGTCGAGATCGCCATGCGCGGTGA > NC_000913/1321288‑1321580 | tGCGGTAAATCACCACGTTATGCCCATTGCTGCGCAACTGATCTGCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGcgcg < 2:623169/150‑1 (MQ=255) gCGGTAAATCACCACGTTATGCCCATTGCTGCGCAACTGATCTGCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCgg > 1:1977283/1‑150 (MQ=255) gCGGTAAATCACCACGTTATGCCCATTCCTGCGCAACTGATCTGCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCgg < 2:514062/150‑1 (MQ=255) cGGTAAATCACCACGTTATGCCCATTGCTGCGCAACTGATCTGCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCggg > 2:1171084/1‑150 (MQ=255) ggTAAATCACCACGTTATGCCCATTGCTGCGCAACTGATCTGCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGc > 1:669771/1‑150 (MQ=255) tAAATCACCACGTTATGCCCATAGCTGCGCAACTGATCTGCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCtt < 1:1314000/150‑1 (MQ=255) aaaTCACCACGTTATGCCCATTGCTGCGCAACTGATCTGCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCTGTACTGcgcgctattg < 1:1530207/150‑7 (MQ=255) aaTCACCACGTTATGCCCATTGCTGCGCAACTGATCTGCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTg > 1:576691/1‑150 (MQ=255) aaTCACCACGTTATGCCCATTGCTGCGCAACTGATCTGCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTg < 2:467756/150‑1 (MQ=255) aTCACCACGTTATGCCCATTGCTGCGCAACTGATCTGCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGt > 2:1325823/1‑150 (MQ=255) aTCACCACGTTATGCCCATTGCTGCGCAACTGATCTGCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGt < 1:1654043/150‑1 (MQ=255) tCACCACGTTATGCCCATTGCTGCGCAACTGATCTGCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAGCCCGCGCTGTACTGcgcgctattgc < 2:1389067/150‑8 (MQ=255) tGCCCATTGCTGCGCAACTGATCTGCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTtcgt > 2:666437/1‑150 (MQ=255) cccATTGCTGCGCAACTGATCTGCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTtcgtcg < 1:1586315/150‑1 (MQ=255) cccATTGCTGCGCAACTGATCTGCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTtcgtcg > 2:1701869/1‑150 (MQ=255) tgctgcGCAACTGATCTGCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTc < 2:1768761/150‑1 (MQ=255) ctgcGCAACTGATCTGCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCg > 2:381494/1‑150 (MQ=255) ctgcGCAACTGATCTGCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCg < 1:997924/150‑1 (MQ=255) gcgcAACTGATCTGCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGAc < 1:1997096/150‑1 (MQ=255) cgcAACTGATCTGCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACg > 1:627265/1‑130 (MQ=255) cgcAACTGATCTGCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACg < 2:627265/130‑1 (MQ=255) cgcAACTGATCTGCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACt < 1:1335566/150‑1 (MQ=255) aCTGATCTGCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCgg < 1:826626/150‑1 (MQ=255) aCTGATCTGCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCgg < 2:669771/150‑1 (MQ=255) cTGATCTGCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGa < 2:1928191/150‑1 (MQ=255) cTGATCTGCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGa > 2:140724/1‑150 (MQ=255) tGATCTGCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGaa < 1:720903/150‑1 (MQ=255) gATCTGCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAAc > 1:1671022/1‑150 (MQ=255) gATCTGCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAAc > 1:902824/1‑150 (MQ=255) gATCTGCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAAc < 1:231596/150‑1 (MQ=255) cTGCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGa > 1:1264550/1‑150 (MQ=255) tGCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGaa > 2:1088128/1‑150 (MQ=255) gCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAAt > 2:498481/1‑150 (MQ=255) gCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAAt > 2:1222877/1‑150 (MQ=255) gCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAAt > 1:69308/1‑150 (MQ=255) ccAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATc < 2:576691/150‑1 (MQ=255) cAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCa < 1:1153740/150‑1 (MQ=255) ggTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATc > 1:85677/1‑147 (MQ=255) ggTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATc < 2:85677/147‑1 (MQ=255) gTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAgg < 2:1279824/150‑1 (MQ=255) ttGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACa > 2:1000314/1‑140 (MQ=255) ttGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACa < 1:1000314/140‑1 (MQ=255) gTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTacac < 2:1628819/150‑1 (MQ=255) gTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTacac > 2:1430459/1‑150 (MQ=255) tAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACAcc < 1:1950364/150‑1 (MQ=255) tAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACAcc > 1:882820/1‑150 (MQ=255) aaaGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAg > 1:935023/1‑150 (MQ=255) gagTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCgg > 1:1326908/1‑111 (MQ=255) gagTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCgg < 2:1326908/111‑1 (MQ=255) gTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCAccc > 1:1409060/1‑150 (MQ=255) gTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCAccc > 2:558262/1‑150 (MQ=255) cGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGc > 1:1170916/1‑150 (MQ=255) gATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCt > 2:1049723/1‑150 (MQ=255) tattatCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTg < 2:508674/150‑1 (MQ=255) atCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACg > 1:1566845/1‑150 (MQ=255) agcagcAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTgg < 1:21851/150‑1 (MQ=255) gcagcaGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGc < 1:997662/150‑1 (MQ=255) agcagAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGa < 2:935023/150‑1 (MQ=255) agcagAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGa > 1:731961/1‑150 (MQ=255) gcagAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGAt > 1:423111/1‑150 (MQ=255) gcagAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGAt < 1:498481/150‑1 (MQ=255) agAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCTGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCCCTTGCACGTTTGCGATAc > 2:781435/1‑150 (MQ=255) agAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATAc > 2:78959/1‑150 (MQ=255) gAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATAcc < 1:1642174/150‑1 (MQ=255) gAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATAcc > 2:1482973/1‑150 (MQ=255) aTGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGt > 2:1933151/1‑150 (MQ=255) gTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGttt < 1:558262/150‑1 (MQ=255) gTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGttt < 1:381494/150‑1 (MQ=255) tCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGtttt < 1:1762500/150‑1 (MQ=255) aGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGTTTTcc > 1:115969/1‑150 (MQ=255) gCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGTTTTcca < 1:447178/150‑1 (MQ=255) ccATCAGAAAGTCTCCTGTTCATGATGCGCGGTTGCAATAT‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTAGTCGGCTTCATACTGCTGATCAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGTTTTccac < 2:1074855/150‑1 (MQ=255) ccATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGTTTTccac < 1:1332757/150‑1 (MQ=255) ccATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGTTTTccac > 1:370857/1‑150 (MQ=255) cATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGTTTTccacc < 2:913304/150‑1 (MQ=255) cATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGTTTTccacc < 2:1671022/150‑1 (MQ=255) tCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGTTTTCCACCAg < 1:1400700/150‑1 (MQ=255) tCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGTTTTCCACCAg < 2:1172483/150‑1 (MQ=255) ctcCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGTTTTCCACCAGCGCCGAGCg > 1:1840658/1‑150 (MQ=255) ctcCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGTTTTCCACCAGCGCCGAGCg < 1:1701869/150‑1 (MQ=255) tgtgCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGTTTTCCACCAGCGCCGAGCGGATc > 1:1171078/1‑150 (MQ=255) tgtgCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGTTTTCCACCAGCGCCGAGCGGATc < 2:69308/150‑1 (MQ=255) tgtgCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGTTTTCCACCAGCGCCGAGCGGATc < 2:115969/150‑1 (MQ=255) tgatgCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGTTTTCCACCAGCGCCGAGCGGATCACAATg < 2:1409060/150‑1 (MQ=255) gatgCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGTTTTCCACCAGCGCCGAGCGGATCACAATGc < 1:1222877/150‑1 (MQ=255) gcgcGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGTTTTCCACCAGCGCCGAGCGGATCACAATGCAgg < 2:731961/150‑1 (MQ=255) cgcgGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGTTTTCCACCAGCGCCGAGCGGATCACAATGCAGgt > 2:1949093/1‑150 (MQ=255) gcgGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGTTTTCCACCAGCGCCGAGCGGATCACAATGCAGgtg > 1:1368789/1‑150 (MQ=255) gTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTAGCGATACCGTTTTCCACCAGCGCCGAGCGGATCACAATGCAGGTGTCg < 2:1977283/150‑1 (MQ=255) tGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGTTTTCCACCAGCGCCGAGCGGATCACAATGCAGGTGTCga < 1:140724/150‑1 (MQ=255) caaagcccgcgcTGTACTGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGTTTTCCACCAGCGCCGAGCGGATCACAATGCAGGTGTCgaga > 2:457732/8‑150 (MQ=255) caaagcccgcgcTGTACTGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGTTTTCCACCAGCGCCGAGCGGATCACAATGCAGGTGTCgaga > 1:27264/8‑150 (MQ=255) aaagcccgcgcTGTACTGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTTCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGTTTTCCACCAGCGCCGAGCGGATCACAATGCAGGTGTCGAGAt > 2:473451/7‑150 (MQ=255) g‑‑cgcgcAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGTTTTCCACCAGCGCCGAGCGGATCACAATGCAGGTGTCGAGATCGCCa < 2:1264550/150‑1 (MQ=255) cccgcgcTGTACTGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGTTTTCCACCAGCGCCGAGCGGATCACAATGCAGGTGTCGAGATCGcc > 1:840611/3‑150 (MQ=255) cgcgcAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGTTTTCCACCAGCGCCGAGCGGATCACAATGCAGGTGTCGAGATCGCCAt < 1:1482973/150‑1 (MQ=255) cgcAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGTTTTCCACCAGCGCCGAGCGGATCACAATGCAGGTGTCGAGATCGCCATgc > 2:1592982/1‑150 (MQ=255) aCAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGTTTTCCACCAGCGCCGAGCGGATCACAATGCAGGTGTCGAGATCGCCATGCGCGGTg > 1:1300113/1‑150 (MQ=255) aCAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGTTTTCCACCAGCGCCGAGCGGATCACAATGCAGGTGTCGAGATCGCCATGCGCGGTg < 2:1170916/150‑1 (MQ=255) cAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGTTTTCCACCAGCGCCGAGCGGATCACAATGCAGGTGTCGAGATCGCCATGCGCGGTGa < 2:1597144/150‑1 (MQ=255) | TGCGGTAAATCACCACGTTATGCCCATTGCTGCGCAACTGATCTGCCAGGTTGTACGTAAAAGAGTCGATATTATCGAGCAGCAGAATGTCAGCCATCAGAAAGTCTCCTGTGCATGATGCGCGGTGGCAATAG‑‑CGCGCAGTACAGCGCGGGCTTTGTTACGGGTTTCGTCGGCTTCCGACTGCGGAACAGAATCAAGGACTACACCAGCACCCGCTTGCACGGTGGCGATACCGTTTTCCACCAGCGCCGAGCGGATCACAATGCAGGTGTCGAGATCGCCATGCGCGGTGA > NC_000913/1321288‑1321580 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |