| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,457,976 | A→T | 5.9% | G160G (GGA→GGT) | paaF → | putative 2,3‑dehydroadipyl‑CoA hydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,457,976 | 0 | A | T | 5.9% | 740.1 / 22.8 | 228 | G160G (GGA→GGT) | paaF | putative 2,3‑dehydroadipyl‑CoA hydratase |
| Reads supporting (aligned to +/- strand): ref base A (106/108); new base T (7/7); total (113/115) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 236 total aligned reads displayed.
GCATTGTTGTGCGATGTGGTGGTTGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTACAAGCGGCAAAGCAAGCGCTGCG > NC_000913/1457827‑1458125 | cATTGTTGTGCGATGTGGTGGTTGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGgag < 2:904293/150‑1 (MQ=255) tgttgtGCGATGTGGTGGTTGCCGGAGAGAACGCGCGTTTTGGGGTGCCGGAAATCACTCTAGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGaaa < 2:173006/150‑1 (MQ=255) gttgtGCGATGTGGTGGTTGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGTAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATT‑G‑‑TGCTGAGCGGAGAAAg < 2:1018237/150‑1 (MQ=255) ttgtGCGATGTGGTGGTTGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGt < 2:81174/150‑1 (MQ=255) gtgCGATGTGGTGGTTGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTAt > 2:1528614/1‑150 (MQ=255) gtgCGATGTGGTGGTTGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTAt < 1:1414583/150‑1 (MQ=255) gtgCGATGTGGTGGGTGCCGGAGAGCACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTAt < 2:1677005/150‑1 (MQ=255) tgCGATGTGGTGGTTGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATc < 1:571122/150‑1 (MQ=255) tgCGATGTGGTGGTTGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATc > 1:1200362/1‑150 (MQ=255) cGATGTGGTGGTTGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCAc < 2:966750/150‑1 (MQ=255) cGATGTGGTGGTTGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCAc < 1:860239/150‑1 (MQ=255) cGATGTGGTGGTTGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCAc > 2:1983747/1‑150 (MQ=255) gATGTGGTGGTTGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCATAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCAcc < 2:1922999/150‑1 (MQ=255) gATGTGGTGGTTGCCGGAGAGAACGCGCGGTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCAcc < 1:328845/150‑1 (MQ=255) tgtgGTGGTTGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGc > 1:995930/1‑150 (MQ=255) tggtggTTGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGTGATACTTTCTCCGCTc < 1:1839050/150‑1 (MQ=255) tggtggTTGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTc < 1:1215895/150‑1 (MQ=255) tggtggTTGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTc > 1:1072151/1‑150 (MQ=255) ttGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCagcaag < 1:33490/150‑1 (MQ=255) gCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCagcaagca > 2:586880/1‑150 (MQ=255) ccGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGATGAGCGGAGAAAGTATCACCGCTCAGCAAGcac < 2:266133/150‑1 (MQ=255) cGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGcaca < 2:251725/150‑1 (MQ=255) aagagaACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCAcagc > 1:1681932/2‑150 (MQ=255) gaACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGc < 2:242473/150‑1 (MQ=255) aaCGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGcc > 2:667431/1‑150 (MQ=255) cgcgcgTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCagcaa > 1:255339/1‑136 (MQ=255) cgcgTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGc > 1:1326967/1‑150 (MQ=255) gTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTgg > 2:929081/1‑150 (MQ=255) gTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGAAGGCGGAACGCAACGTTTAATACGTAGTGTAGGTATATCGTTAGCCAGCAAAATC‑G‑‑AGCTGAGCGGATCAATTATCACCGCTCAGCAAGCACAGCAGGCCGGTCTgg > 2:839520/1‑150 (MQ=255) ttttGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGt > 1:437705/1‑150 (MQ=255) ttttGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGt > 1:1451554/1‑150 (MQ=255) ttttGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGt < 1:1715529/150‑1 (MQ=255) tttGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGtt < 1:684236/150‑1 (MQ=255) ttGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTa < 1:520201/150‑1 (MQ=255) gggTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGc < 2:1391696/150‑1 (MQ=255) gggTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGc < 1:1782299/150‑1 (MQ=255) ggTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCg < 1:1972598/150‑1 (MQ=255) tGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACg < 1:1048066/150‑1 (MQ=255) tGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACg < 2:331917/150‑1 (MQ=255) tGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGGTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACg < 1:793391/150‑1 (MQ=255) gCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGt > 1:740856/1‑150 (MQ=255) gAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTc < 2:1200362/150‑1 (MQ=255) aaTCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTccc > 2:1136508/1‑150 (MQ=255) ctctCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCg > 2:1904726/1‑150 (MQ=255) ctcGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGTGATACTTTCTCCGCTCagca > 1:1448674/1‑107 (MQ=38) ctcGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGAt > 2:817562/1‑150 (MQ=255) tcGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGAtt < 1:1528614/150‑1 (MQ=255) gCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTaa < 2:548282/150‑1 (MQ=255) atcatGCCTGGCGCAGGCGGAACGCAACG‑TTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAAccc > 1:1032946/1‑150 (MQ=255) tcatGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAAccc < 2:1110448/150‑1 (MQ=255) catGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCt > 2:702342/1‑150 (MQ=255) atGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTc > 1:1368239/1‑150 (MQ=255) tGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCg < 1:1138807/150‑1 (MQ=255) tGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGGAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCATAGCGATTTTACCCTCg < 2:1629634/150‑1 (MQ=255) gCCTGGCGCAGGCGGAACGCAAGGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGa < 2:1685571/150‑1 (MQ=255) gCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGa > 1:1644667/1‑150 (MQ=255) cTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAAt < 1:1357765/150‑1 (MQ=255) cgcAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATagga > 1:43139/1‑147 (MQ=255) cgcAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGc > 2:1795591/1‑150 (MQ=255) gcAGGCTGAACGCAACGTTTAATCCGTAGTTTCGGTAACTCGTTCGCCAGCAAACTG‑G‑‑TGCTGAGCGGAGATAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGAGGTCTTCCCCAGCGATTTAACCCTCGAATACGcc < 2:914036/150‑1 (MQ=255) gcAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGaa < 1:1272125/144‑1 (MQ=255) gcAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGaa > 2:1272125/1‑144 (MQ=255) gcAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGcc < 1:465988/150‑1 (MQ=255) ggCGGAACGCAAAGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCCTGCTGTGCTTGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGcc > 2:1915899/1‑150 (MQ=255) aaCGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCt < 1:1102936/150‑1 (MQ=255) aaCGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCt > 2:1828367/1‑150 (MQ=255) gCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCAcagcag > 1:217352/1‑88 (MQ=255) gCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCAcagcag < 2:217352/88‑1 (MQ=255) cAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCg < 1:829041/130‑1 (MQ=255) cAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCa > 2:47278/1‑150 (MQ=255) aTCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATg < 1:884142/150‑1 (MQ=255) aTCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAACG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATg > 2:635431/1‑150 (MQ=255) tCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATgg < 1:1502065/150‑1 (MQ=255) cGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCa < 1:1594406/150‑1 (MQ=255) ggTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGCCGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGCCATCGAAAATGGAACGTCACTcg > 2:1255428/1‑150 (MQ=255) ggTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTcg < 2:442926/150‑1 (MQ=255) ggTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTcg > 2:48561/1‑150 (MQ=255) ggTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTcg > 1:704909/1‑150 (MQ=255) ggTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAG‑AAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTcgc > 2:1334502/1‑150 (MQ=255) gTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTcgc < 2:1451554/150‑1 (MQ=255) aaaTCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTcgccg > 1:1933776/1‑150 (MQ=255) aaaTCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTACCCCAGCGATTTAACCCACGAAACCGCCTTACAGCTGGCATCGAAAATGGCACGTCACTcgccg > 1:1083078/1‑150 (MQ=255) cGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTgg < 1:777290/150‑1 (MQ=255) tAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCttgtaa > 2:995537/1‑145 (MQ=255) tAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCt < 2:109531/150‑1 (MQ=255) gCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTa > 1:1305377/1‑150 (MQ=255) ccAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTAc < 1:48561/150‑1 (MQ=255) cAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTACa > 1:985753/1‑150 (MQ=255) cAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTACAAGc < 1:1670393/150‑1 (MQ=255) cAAAACG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTACAAGc < 1:635431/150‑1 (MQ=255) aaaaTG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTACAAGCg < 1:1734444/150‑1 (MQ=255) aaaTG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCCCGTCACTCGCCGCTGGCCTTACAAGCGG > 2:1883960‑M1/1‑150 (MQ=255) aaaTG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTACAAGCGG < 2:576088‑M1/150‑1 (MQ=255) g‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTACAAGCGGCAAAG < 1:915084‑M1/150‑1 (MQ=255) g‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTACAAGCGGCAAAG < 1:1828367‑M1/150‑1 (MQ=255) tGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTACAAGCGGCAAAGC < 1:1904726‑M1/150‑1 (MQ=255) gCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTgg < 2:1863116/131‑1 (MQ=255) cTGAGCGGTGATACTTTCTCCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTACAAGCGGCAaagcaa > 1:1391337/1‑150 (MQ=255) cTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTACAAGCGGCAaagcaa < 1:58257/150‑1 (MQ=255) gAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTACAAGCGGCAaagcaagc > 1:199586/1‑150 (MQ=255) | GCATTGTTGTGCGATGTGGTGGTTGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTACAAGCGGCAAAGCAAGCGCTGCG > NC_000913/1457827‑1458125 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |