| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,457,983 | A→T | 6.3% | I163F (ATC→TTC) | paaF → | putative 2,3‑dehydroadipyl‑CoA hydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,457,983 | 0 | A | T | 6.3% | 757.2 / 23.0 | 231 | I163F (ATC→TTC) | paaF | putative 2,3‑dehydroadipyl‑CoA hydratase |
| Reads supporting (aligned to +/- strand): ref base A (110/106); new base T (8/7); total (118/113) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 233 total aligned reads displayed.
TGTGCGATGTGGTGGTTGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTACAAGCGGCAAAGCAAGCGCTGCGCCAGT > NC_000913/1457834‑1458130 | tgtgCGATTTGGTGGTTGAAGGAGAGAACTCGCGTTTTGGGTTGCCGGAAATCACTCTCGGAATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTa > 2:491143/1‑150 (MQ=255) tgCGATGTGGTGGTTGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATc < 1:571122/150‑1 (MQ=255) gCGATGTGGTGGTTGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCa > 2:1876043/1‑150 (MQ=255) cGATGTGGTGGTTGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCTCTCTCGGCTTCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCAc < 2:1072304/150‑1 (MQ=255) cGATGTGGTGGTTGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCAc < 2:966750/150‑1 (MQ=255) cGATGTGGTGGTTGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCAc < 1:860239/150‑1 (MQ=255) cGATGTGGTGGTTGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCAc > 2:1983747/1‑150 (MQ=255) gATGTGGTGGTTGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCAcc < 1:1742740/150‑1 (MQ=255) gATGTGGTGGTTGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCATAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCAcc < 2:1922999/150‑1 (MQ=255) gATGTGGTGGTTGCCGGAGAGAACGCGCGGTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCAcc < 1:328845/150‑1 (MQ=255) tggtggTTGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGTGATACTTTCTCCGCTc < 1:1164650/150‑1 (MQ=255) tggtggTTGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTc > 1:1072151/1‑150 (MQ=255) tggtggTTGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTc < 1:938133/150‑1 (MQ=255) tggtggTTGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTc < 1:1215895/150‑1 (MQ=255) ggtggtTGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCa < 1:1402904/150‑1 (MQ=255) tttGCCGGAGATAACGCGCGTTTTGGGTTGCCGTAAATCACTCTCGGCATCATGCCTGGCGCAGTCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGTGATACTTTCTCCGCTCagcac < 1:852301/149‑2 (MQ=255) gtTGCCGTATAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCTGAACGCAACTTTTAATCCGTAGTGTCGGTAAATCGTTAGACAGCAAAATG‑G‑‑TTCTGAGCGGTTATACTTTCTCCGCTCagcac < 2:43551/150‑2 (MQ=255) ttGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCagcaag < 1:33490/150‑1 (MQ=255) ccGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGcac > 2:1204917/1‑150 (MQ=255) ccGGAGAGAACGCGCGTGTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGcac > 2:449410/1‑150 (MQ=255) cGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGcaca < 1:1660645/150‑1 (MQ=255) agaACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAgg < 1:181565/150‑1 (MQ=255) gaACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGc > 2:1138807/1‑150 (MQ=255) cgcgcgTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCagcaa > 1:255339/1‑136 (MQ=255) cgcgcgTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCgg > 2:138215/1‑150 (MQ=255) cgcgTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGc > 1:1326967/1‑150 (MQ=255) gcgTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCt < 2:87257/150‑1 (MQ=255) gTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGAAGGCGGAACGCAACGTTTAATACGTAGTGTAGGTATATCGTTAGCCAGCAAAATC‑G‑‑AGCTGAGCGGATCAATTATCACCGCTCAGCAAGCACAGCAGGCCGGTCTgg > 2:839520/1‑150 (MQ=255) ttttGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGt > 1:1451554/1‑150 (MQ=255) ttttGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGt < 1:144862/150‑1 (MQ=255) ttttGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGt > 1:437705/1‑150 (MQ=255) tttGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGtt < 1:684236/150‑1 (MQ=255) ttGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTa < 1:520201/150‑1 (MQ=255) tGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAg > 1:908182/1‑150 (MQ=255) ggTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCg < 1:1972598/150‑1 (MQ=255) ttGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGAc < 2:714252/150‑1 (MQ=255) tGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACg < 1:1048066/150‑1 (MQ=255) gCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGt > 1:740856/1‑150 (MQ=255) ccGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTc > 2:1673064/1‑150 (MQ=255) aaTCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTccc > 2:815521/1‑150 (MQ=255) aaTCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTccc < 2:59707/150‑1 (MQ=255) tCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTccccc > 2:483383/1‑149 (MQ=255) ctctCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCg < 1:1606300/150‑1 (MQ=255) ctcGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGAt > 2:1111565/1‑150 (MQ=255) tcGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGAtt < 1:1528614/150‑1 (MQ=255) ttcatGGCTGGCGGTGGCGGAACGCTAGGTTTATTGCGTAGTGTGGGTATTTCGTTAGCGAGCTATATG‑G‑‑TGCTGAGCGGAGAAAGTATGTCGGCTCTGGTAGGTCAGGAGGGCGGGCTGGTTAGCGACGTCTTCCGGAGCGATTTaagc < 1:804774/149‑3 (MQ=255) atcatGCCTGGCGCAGGCGGAACGCAACG‑TTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAAccc > 1:1032946/1‑150 (MQ=255) tGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCg < 1:702342/150‑1 (MQ=255) tGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCg < 1:1138807/150‑1 (MQ=255) tGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGGAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCATAGCGATTTTACCCTCg < 2:1629634/150‑1 (MQ=255) gCCTGGCGCAGGCGGAACGCAAGGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGa < 2:1685571/150‑1 (MQ=255) cTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAAt < 1:1357765/150‑1 (MQ=255) cgcAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATagga > 1:43139/1‑147 (MQ=255) gcAGGCTGAACGCAACGTTTAATCCGTAGTTTCGGTAACTCGTTCGCCAGCAAACTG‑G‑‑TGCTGAGCGGAGATAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGAGGTCTTCCCCAGCGATTTAACCCTCGAATACGcc < 2:914036/150‑1 (MQ=255) gcAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGaa < 1:1272125/144‑1 (MQ=255) gcAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGcc < 1:465988/150‑1 (MQ=255) aGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCtt < 1:108011/150‑1 (MQ=255) ggCGGAACGCAAAGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCCTGCTGTGCTTGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGcc > 2:1915899/1‑150 (MQ=255) aaCGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCt < 1:1102936/150‑1 (MQ=255) gCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCAcagcag > 1:217352/1‑88 (MQ=255) gCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCAcagcag < 2:217352/88‑1 (MQ=255) gCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGc > 1:1732691/1‑150 (MQ=255) gCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGc > 2:58257/1‑150 (MQ=255) cAACGTTTAATCAGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGATGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCa > 2:1773241/1‑150 (MQ=255) tAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGaaaa > 2:248348/1‑150 (MQ=255) aTCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAACG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATg > 2:635431/1‑150 (MQ=255) tCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATgg > 2:1278567/1‑150 (MQ=255) tCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATgg > 1:576088/1‑150 (MQ=255) tCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATgg < 1:1502065/150‑1 (MQ=255) gTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCAc < 1:1917695/150‑1 (MQ=255) tgtCGGTAAATCGTTAGCCAGAAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCa > 2:944302/1‑150 (MQ=255) gtCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCAc > 1:1364129/1‑150 (MQ=255) gTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTcgc < 2:1451554/150‑1 (MQ=255) cGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTgg < 1:777290/150‑1 (MQ=255) ttAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGcc < 1:47278/150‑1 (MQ=255) tAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCttgtaa > 2:995537/1‑145 (MQ=255) tAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCttgtaa > 2:1002263/1‑145 (MQ=255) aGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCtt > 2:1825977/1‑150 (MQ=255) gCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTa < 1:1283336/150‑1 (MQ=255) ccAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTaa > 1:1698010/1‑149 (MQ=255) cAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACATCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGCCATCGAAAATCGCACGTCAATCGCCGCTGGCCTAACa > 2:253266/1‑150 (MQ=255) cAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTACa > 1:1941550/1‑150 (MQ=255) cAAAACG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTACAAGc < 1:635431/150‑1 (MQ=255) aaaaTG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACGCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTACAAGCg > 2:1897433/1‑150 (MQ=255) aaaTG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTACAAGCGG < 2:1446565‑M1/150‑1 (MQ=255) aaTG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTACAAGCGGC < 1:1673064‑M1/150‑1 (MQ=255) cttgcTGAGCGGTGATACTTTCTCCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTACAAGCGGCAAA > 1:1829532‑M1/3‑150 (MQ=255) gCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTgg > 1:1863116/1‑131 (MQ=255) gCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTgg < 2:1863116/131‑1 (MQ=255) gCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTACAAGCGGCAaagca > 2:553370/1‑150 (MQ=255) cTGAGCGGTGATACTTTCTCCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTACAAGCGGCAaagcaa > 2:309551/1‑150 (MQ=255) cTGAGCGGTGATACTTTCTCCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTACAAGCGGCAaagcaa > 1:1391337/1‑150 (MQ=255) cTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTACAAGCGGCAaagcaa > 2:1267973/1‑150 (MQ=255) gAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTACAAGCGGCAaagcaagc > 1:199586/1‑150 (MQ=255) gCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTACAAGCGGCAAAGCAAgcgc > 1:786450/1‑150 (MQ=255) gagaAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTACAAGCGGCAAAG > 2:687288‑M1/1‑140 (MQ=255) agaAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGAGACGTCTTCCCCAGCGATTTAACCATCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTACAAGCGGCAAAGCAAGCGCTgcg > 2:1101872/1‑150 (MQ=255) aaGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTACAAGCGGCAAAGCAAGCGCTGCGCCa > 1:91577/1‑150 (MQ=255) aGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCACGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTACAAGCGGCAAAGCAAGCGCTGCGCCAg < 1:992090/150‑1 (MQ=255) gTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTACCCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTACAAGCGGCAAAGCAAGCGCTGCACCAGt > 2:1603108/1‑150 (MQ=255) | TGTGCGATGTGGTGGTTGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATG‑G‑‑TGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTACAAGCGGCAAAGCAAGCGCTGCGCCAGT > NC_000913/1457834‑1458130 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |