| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,412,642 | G→C | 10.3% | intergenic (‑48/+35) | yfbU ← / ← yfbV | UPF0304 family protein YfbU/UPF0208 membrane protein YfbV |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,412,642 | 0 | G | C | 10.3% | 367.4 / 27.5 | 117 | intergenic (‑48/+35) | yfbU/yfbV | UPF0304 family protein YfbU/UPF0208 membrane protein YfbV |
| Reads supporting (aligned to +/- strand): ref base G (41/63); new base C (6/6); total (48/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.43e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.88e-01 | |||||||||||
Only 100 of 118 total aligned reads displayed.
GCAGGCGACGGTAACGTTCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCTTCAACGGGTGCCAACACCTGTCCAGACTCC > NC_000913/2412498‑2412791 | gCAGGCGACGGTAACGTTCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTCCTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGc > 2:1948352/1‑150 (MQ=255) ggCGACGGTAACGTTCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCctt > 1:1887208/1‑150 (MQ=255) ggCGACGGTAACGTTCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCctt > 1:65479/1‑150 (MQ=255) cGACGGTAACGTTCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCcttct < 2:960776/150‑1 (MQ=255) cGACGGTAACGTTCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCcttct > 1:1447744/1‑150 (MQ=255) gACGGTAACGTTCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCcttctt < 1:580872/150‑1 (MQ=255) gACGGTAACGTTCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCcttctt > 2:1670419/1‑150 (MQ=255) cGGTAACGTTCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCtttt < 2:1680496/150‑1 (MQ=255) cGGTAACGTTCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCtttt > 1:1165222/1‑150 (MQ=255) cGGTAACGTTCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCATACTCAGCCTTCtttt < 1:1179546/150‑1 (MQ=255) cGGTAACGTTCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCATACTCAGCCTTCtttt < 1:186297/150‑1 (MQ=255) cGGTAACGTTCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCATACTCAGCCTTCtttt < 1:935046/150‑1 (MQ=255) gTAACGTTCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCATACTCAGCCTTCtttttt < 2:627747/150‑3 (MQ=255) tAACGTTCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTATACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTtata < 1:1116012/150‑1 (MQ=255) cGTTCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGc > 2:1386303/1‑150 (MQ=255) cGTTCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGc > 2:1379352/1‑150 (MQ=255) gTTCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCg < 1:1996354/150‑1 (MQ=255) gTTCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCg < 1:922609/150‑1 (MQ=255) gTTCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCg < 1:530730/150‑1 (MQ=255) ttCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGt > 1:1664730/1‑150 (MQ=255) tCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTa < 1:1435033/150‑1 (MQ=255) cAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTaa < 2:1138710/150‑1 (MQ=255) gCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATc > 1:1187662/1‑150 (MQ=255) gCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATc > 1:217980/1‑150 (MQ=255) cATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCttt < 1:1665393/136‑1 (MQ=255) cATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCttt > 2:1665393/1‑136 (MQ=255) tGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAgggg < 2:118204/150‑1 (MQ=255) tGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAgggg < 1:78993/150‑1 (MQ=255) ccGGTTCTAGCATATTAATCATCTTGTACTTATTAGACAAAATAAGACGTTTCGCTTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAgggggc < 1:697742/150‑3 (MQ=255) ccGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTc < 1:1511741/150‑1 (MQ=255) gATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAAt < 2:91674/150‑1 (MQ=255) cGAGCATAGTGATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTTCTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTAc < 1:1703372/150‑1 (MQ=255) cGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTAc > 1:1226511/1‑150 (MQ=255) gCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACaaa < 2:136298/150‑1 (MQ=255) gCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACaaa < 2:642275/150‑1 (MQ=255) cATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAat < 2:1187662/150‑1 (MQ=255) gTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGAGGTCAATTACAAatcatc < 1:796876/150‑1 (MQ=255) tcatcaTCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTatat > 1:91950/1‑120 (MQ=255) tcatcaTCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTatat < 2:91950/120‑1 (MQ=255) catcatCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCaa < 2:1458230/150‑1 (MQ=255) tcatcTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAgg < 1:1085868/150‑1 (MQ=255) atcTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGaa > 1:509792/1‑150 (MQ=255) tcTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGaaa < 2:684141/150‑1 (MQ=255) cTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAg < 2:1165222/150‑1 (MQ=255) tGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAg < 2:714098/148‑1 (MQ=255) tGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAg > 1:714098/1‑148 (MQ=255) ttACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGttt < 2:538265/149‑1 (MQ=255) gTACTGATTAGACATAATAAGACCTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTCCTCCGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACATATCATGAAGGAAAGttt < 2:888795/150‑1 (MQ=255) gTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGttt < 2:684393/150‑1 (MQ=255) tACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTAAATTACAAATCATCAAGGAAAGtttt > 2:224885/1‑150 (MQ=255) aCTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTa < 2:1447744/150‑1 (MQ=255) aCTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTa < 2:667148/150‑1 (MQ=255) cTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTAt < 2:217980/150‑1 (MQ=255) cTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTAt < 2:1180881/150‑1 (MQ=255) gATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATcc < 2:1887208/150‑1 (MQ=255) gATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATcc > 1:149061/1‑150 (MQ=255) gACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCGTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAgttt > 1:1729659/1‑149 (MQ=255) aCAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAgttgt > 2:1129014/1‑150 (MQ=255) cAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAgttgtt < 2:767554/150‑1 (MQ=255) cAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAgttgtt > 2:767994/1‑150 (MQ=255) cGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTa > 1:505593/1‑130 (MQ=255) cGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGgcgcg < 1:1670419/150‑1 (MQ=255) gTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGGCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGgcgcgc < 2:562968/150‑1 (MQ=255) gcgTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTGAAAAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATACAGTTGTTTGAAGGCGCGCTTa > 1:1331407/1‑150 (MQ=255) gTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCg < 1:1157156/150‑1 (MQ=255) gTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCg < 2:1226511/150‑1 (MQ=255) gTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTc > 1:584446/1‑150 (MQ=255) gTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTc > 1:1120992/1‑150 (MQ=255) cATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAgggg < 1:1064732/87‑1 (MQ=255) cATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAgggg > 2:1064732/1‑87 (MQ=255) tttCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCt > 1:809991/1‑150 (MQ=255) aTTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGc > 1:1898310/1‑150 (MQ=255) tttgACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTg < 1:1948352/149‑1 (MQ=255) gttgACTCCTGTTTCACTCTACTACGGTG‑‑‑AAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTgg < 1:550354/150‑1 (MQ=255) gttgACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTg < 1:1944689/150‑1 (MQ=255) gttgACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTg > 2:1551870/1‑150 (MQ=255) gTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGc > 2:1937384/1‑150 (MQ=255) gTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGc > 2:1344102/1‑150 (MQ=255) tCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCCGATTACCAGGcatt < 2:1898310/150‑4 (MQ=255) cACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGc > 2:931951/1‑150 (MQ=255) aCTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGcc < 1:1491462/150‑1 (MQ=255) ctctACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCt < 1:114172/150‑1 (MQ=255) ctctACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGATTACCAGGcattagc < 1:1386303/150‑7 (MQ=255) ctctACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGATTACCAGGcattagc < 1:1379352/150‑7 (MQ=255) tacGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCTTCAACg < 2:418243/150‑1 (MQ=255) tacGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCTTCAACg < 1:1124645/150‑1 (MQ=255) gTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCTTCAACGGGTg < 2:1120992/150‑1 (MQ=255) catataaaaGAAGGCATACTCAGCCTTCTTTTATATGCGTAATCAGGGGTCGATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCTTCAACGGGTGcc > 2:436681/6‑150 (MQ=255) aaaaaaaaGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGACAGCTAATGCCTGGTAATCAGGCTTGCCTTCAACGGGTGCCa > 1:1561939/1‑150 (MQ=255) aaaaaaGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCTTCAACGGGTGCCAac < 2:509792/150‑1 (MQ=255) aaaGAAGGCATACTCAGCCTTCTTTTATATGCGTAATCAGGGGTCGATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCTTCAACGGGTGCCAACAcc < 1:436681/150‑1 (MQ=255) aaaGAAGGCATACTCAGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCTTCAACGGGTGcc > 2:254719/1‑144 (MQ=255) aaaGAAGGCATACTCAGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCTTCAACGGGTGcc < 1:254719/144‑1 (MQ=255) aaaGAAGGCATACTCAGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCTTCAACGGGTGCCAACAcc > 2:355649/1‑150 (MQ=255) aaaGAAGGCATACTCAGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCTTCAACGGGTGCCAACAcc > 2:1844327/1‑150 (MQ=255) aaaGAAGGCATACTCAGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCTTCAACGGGTGCCAACAcc > 1:116304/1‑150 (MQ=255) aaaGAAGGCATACTCAGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCTTCAACGGGTGCCAACAcc > 1:1375876/1‑150 (MQ=255) agGCTGAGTATGCCTTCTTTTATATGCGT‑ATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCTTCAACGGGTGCCAACACCTGTCCa > 1:1112180/1‑150 (MQ=255) gCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCTTCAACGGGTGCCAACACCTGTCCAg > 1:1763838/1‑150 (MQ=255) gTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCTTCAACGGGTGCCAACACCTGTCCAGACTcc < 1:910343/150‑1 (MQ=255) | GCAGGCGACGGTAACGTTCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCTTCAACGGGTGCCAACACCTGTCCAGACTCC > NC_000913/2412498‑2412791 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |