| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 291401 | NA (NA) | 217 (0.970) | 113/186 | 0.4 | 70.0% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 568268 = | 93 (0.420) | intergenic (+21/‑47) | renD/emrE | DLP12 prophage; protein RenD/multidrug/betaine/choline efflux transporter EmrE | |||||
Only 100 of 504 total aligned reads displayed.
TTTTAAGGAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGCAGAGGTCATTGGTA > NC_000913/568169‑568366 | ttttAAGGAGTTTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTc > 1:751314/1‑100 (MQ=255) tttAAGGAGTGTCGTCAGAGTGCCGCGATTAAATGGTTATTGAGGGTATATTAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCa < 1:35974/100‑1 (MQ=255) tgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAAACTgta > 1:3903215‑M2/92‑100 (MQ=255) aGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTgta < 1:1010975/100‑1 (MQ=255) aacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAAACTgtagt < 1:1450486‑M2/11‑1 (MQ=255) gtCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTgtagta > 1:4792260/1‑100 (MQ=255) acaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccc < 2:2233351‑M2/1‑1 (MQ=255) acaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAAACTgtagta > 1:2394761‑M2/89‑100 (MQ=255) tCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCa < 2:2931089/89‑1 (MQ=255) cGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCaa > 2:4839339/1‑89 (MQ=255) ggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAAACTGTAGTACaa > 1:4715539‑M2/86‑100 (MQ=255) ccAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAAc > 2:3929915/1‑89 (MQ=255) agagTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAggtaatgac < 1:4351532‑M1/100‑10 (MQ=255) agggCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTgta < 2:3690776/86‑1 (MQ=255) gCCGCGATGAAACGGGTATTGAGGGTAGATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTcc < 1:1344049/100‑1 (MQ=255) gctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAAACTGTAGTAc < 2:5609499‑M2/13‑1 (MQ=255) cgcgATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAggtaatgactccaact > 1:2630778‑M1/1‑84 (MQ=255) gcgATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAggtaat < 2:2976790‑M1/89‑7 (MQ=255) cgATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAAt < 2:3076103/89‑1 (MQ=255) tagaaacataagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAAACTGTAGTACAATTCTCTCCAGTTTg < 1:1704274‑M2/29‑1 (MQ=255) tagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAAACTGTAGTACAATTCTCTCCAGTTTg < 1:3102960‑M2/29‑1 (MQ=255) tagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAAACTGTAGTACAATTCTCTCCAGTTTg > 1:5412229‑M2/72‑100 (MQ=255) aTGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAggtaatgac < 2:2888671‑M1/89‑10 (MQ=255) tGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAggtaatgact > 2:1427528‑M1/1‑79 (MQ=255) gaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAAACTGTAGTACAATtctc < 2:3467905‑M2/20‑1 (MQ=255) gAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAggtaatgactc > 2:1476896‑M1/1‑78 (MQ=255) gAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATtctc > 2:4972518/1‑89 (MQ=255) aaacagaagccactggagcacctcaaaaactccatcatacactaaatcagtaagttggcagcatcaccCAAACTGTAGTACAATtctct < 2:4704870‑M2/21‑1 (MQ=255) aaacagaagccactggagcacctcaaaaacaccatcatgcactaaatcagtaagttggcagcatcaccCAAACTGTAGTACaa < 1:4623423‑M2/15‑1 (MQ=255) aacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAAACTGTAGTACAATTCTCTCCAGTTTGAACa < 1:5274638‑M2/33‑1 (MQ=255) acagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAAACTGTAGTACAATTCTCTcc > 2:797852‑M2/67‑89 (MQ=255) ggTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAggtaatgactccaactt < 2:1645972‑M1/89‑18 (MQ=255) aagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAAACTGTAGTACAATTCTCTCCAGtt > 2:2364532‑M2/63‑89 (MQ=255) tATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAggtaatgactccaacttat < 2:3849997‑M1/89‑20 (MQ=255) aTTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAggtaatgactccaacttatt < 2:2279481‑M1/89‑21 (MQ=255) ttGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAggtaatgactccaacttattg > 2:2472857‑M1/1‑68 (MQ=255) ttGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAggtaatgactccaacttattg > 2:5048346‑M1/1‑68 (MQ=255) tGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAggtaatgactccaacttattga > 2:5541392‑M1/1‑67 (MQ=255) ggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGc > 1:1963519‑M2/55‑100 (MQ=255) gagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGa < 2:2774204‑M2/36‑1 (MQ=255) gcacctcaacaacaccatcatacactaaatcagtaagttggcagcatcaccCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTAt < 1:4087433‑M2/49‑1 (MQ=255) gcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGaaa < 2:5493476‑M2/38‑1 (MQ=255) ataAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAggtaatggctccaacttattgatagtgtttt < 2:762421‑M1/89‑32 (MQ=255) ataAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAggtaatgactccaacttattgatagtgttttatgttcagata > 1:604140‑M1/1‑58 (MQ=255) ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAat > 2:1848386‑M2/48‑89 (MQ=255) ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAAc > 1:210515‑M2/48‑100 (MQ=255) aaaaGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAggtaatgactccaacttattgatagtgttttat > 2:1216976‑M1/1‑56 (MQ=255) aaaGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAggtaatgactccaacttattgatagtgttttatg > 2:1311801‑M1/1‑55 (MQ=255) caaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAatat > 2:68856‑M2/46‑89 (MQ=255) aaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCt > 1:3964831‑M2/45‑100 (MQ=255) aGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAggtaatgactccaacttattgatagtgttttatgttcagataatgcc < 1:1400707‑M1/100‑48 (MQ=255) gAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAggtaatgactccaacttattgatagtgttttatgttcagataatgccc < 1:4582412‑M1/100‑49 (MQ=255) gAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAggtaatgactccaacttattgatagtgttttatgttc < 2:2842388‑M1/89‑38 (MQ=255) gAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAggtaatgactccaacttattgatagtgttttatgttc < 2:2592645‑M1/89‑38 (MQ=255) acaccatcatacactaaatcagtaagttggcagcatcaccCAAACTGTAGTACAATTCTCTCCAGTTTGAGCAGGAAAGAATATGCTATGAACCCTtata < 1:5542728‑M2/60‑1 (MQ=255) caccatcatacactaaatcagtaagttggcagcatcaccCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATg > 2:5244025‑M2/40‑89 (MQ=255) aTGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAggtaatgactccaacttattgatagtgttttatgttcagataatg < 2:3382981‑M1/89‑46 (MQ=255) ggAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgt > 1:3427625‑M1/1‑41 (MQ=255) ggAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAggtaatgactccaacttattgatagtgttttatgttcagataatgccc > 2:5374351‑M1/1‑41 (MQ=255) ggAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCtt > 1:1651865/1‑100 (MQ=255) tacactaaatcagtaagttggcagcatcaccCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTta < 2:4299183‑M2/58‑1 (MQ=255) tacactaaatcagtaagttggcagcatcaccCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTta < 2:413608‑M2/58‑1 (MQ=255) gAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtc < 1:1833083‑M1/100‑61 (MQ=255) gAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAggtaatgactccaacttattgatagtgttttatgttcagataatgcccg < 2:1767018‑M1/89‑50 (MQ=255) acactaaatcagtaagttggcagcatcaccCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTtat > 2:1122750‑M2/31‑89 (MQ=255) acactaaatcagtaagttggcagcatcaccCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTtgg > 1:5127995‑M2/31‑100 (MQ=255) aaCACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtca < 1:3166895‑M1/100‑62 (MQ=255) aaCACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtca < 1:3828800‑M1/100‑62 (MQ=255) cactaaatcagtaagttggcagcatcaccCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTtata < 2:3202006‑M2/60‑1 (MQ=255) cactaaatcagtaagttggcagcatcaccCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTtggt > 1:3251058‑M2/30‑100 (MQ=255) cacaATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTatat < 2:459388/89‑1 (MQ=255) actaaatcagtaagttggcagcatcaccCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTtggtg < 1:2777037‑M2/72‑1 (MQ=255) acaATGATGAAACAGGTGAGTTGAGTTCAAACTGTAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgc < 1:2176798‑M1/100‑65 (MQ=255) acaATGATGAAACAGGTGAGTTGAGTTCAAACTGTAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgc < 1:4269586‑M1/100‑65 (MQ=255) taaatcagtaagttggcagcatcaccCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTggtggt > 1:3731197‑M2/27‑100 (MQ=255) caATGATGAAACAGGTGAGTTGAGTTCAAACTGTAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgac > 2:3653102‑M1/1‑35 (MQ=255) gatgaAACAGGTGAGTTGAGTTCAAACTGTAgggaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttg > 2:4391286‑M1/1‑31 (MQ=255) gatctagttggcagcatcaccCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAAt < 1:3334416‑M2/79‑1 (MQ=255) tgaAACAGGTGAGTTGAGGTCAAACTGTAggtaatgactccaacttagtggtcgtgttttatgttcagataatgcccggtgactttgtc > 2:1941104‑M1/1‑29 (MQ=255) aaaCAGGTGAGTTGAGTTCAAACTGTAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccacc > 1:2683930‑M1/1‑27 (MQ=255) aaaCAGGTGAGTTGAGTTCAAACTGTAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccacc > 1:286405‑M1/1‑27 (MQ=255) gttggcagcatcaccCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGc > 1:1604030‑M2/16‑100 (MQ=255) gttggcagcatcaccCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGc > 1:4874815‑M2/16‑100 (MQ=255) cAGGTGAGTTGAGTTCAAACTGTAGTACGATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGc < 1:2306914/100‑1 (MQ=255) ggcagcatcaccCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCa > 2:1013732‑M2/13‑89 (MQ=255) ggcagcatcaccCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGCaga > 1:3549329‑M2/13‑100 (MQ=255) gTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCa < 2:4034585/89‑1 (MQ=255) tgagttgagtTCAAACTGTAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttg < 1:893935‑M1/100‑81 (MQ=255) tgagttgagtTCAAACTGTAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttg < 1:2502948‑M1/100‑81 (MQ=255) gagttgagttCAAACTGTAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcc < 2:5142265‑M1/89‑71 (MQ=255) cagcatcaccCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGCAGAgg > 1:4498582‑M2/11‑100 (MQ=255) caccCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGc < 2:334957‑M2/85‑1 (MQ=255) caccCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGc > 2:3736853‑M2/5‑89 (MQ=255) agttCAAACTGTAggtaatgactccaacttattgctagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgat > 2:3539054‑M1/1‑13 (MQ=255) gttCAAACTGTAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatt > 2:1531328‑M1/1‑12 (MQ=255) accCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGCAGAGGTCATTgg > 1:3308871‑M2/4‑100 (MQ=255) ttCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGCAGAGGTCATTGGt < 1:5048810/100‑1 (MQ=255) ccCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGCAGAGGTCATTGGt > 1:1184753‑M2/3‑100 (MQ=255) ccCAAACTGTAGTACAATTCTCGCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGCag < 2:2059179‑M2/87‑1 (MQ=255) cAAACTGTAGTACAATTCTCTCCCGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGCagag < 2:2020900/89‑1 (MQ=255) | TTTTAAGGAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGCAGAGGTCATTGGTA > NC_000913/568169‑568366 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |