| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,210,435 | Δ1 bp | 6.0% | coding (109/1014 nt) | tsaD ← | N(6)‑L‑threonylcarbamoyladenine synthase, TsaD subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,210,435 | 0 | C | . | 6.0% | 276.5 / 10.4 | 83 | coding (109/1014 nt) | tsaD | N(6)‑L‑threonylcarbamoyladenine synthase, TsaD subunit |
| Reads supporting (aligned to +/- strand): ref base C (34/43); new base . (2/3); total (37/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.65e-01 | |||||||||||
CCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCTTTATTACCGCGCAGTGTAGGACC > NC_000913/3210287‑3210584 | ccGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCg < 1:595092/150‑1 (MQ=255) cGACTAATCCAGGGCCGGCGGCATAGGCCACAGCATCAATGTCTTTTGCCGTAAAACCCGACTCCTTTAGCGCCGCCGGGCTCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGGTCAGGCACGACGCCGCCGTAGTCAGCGt < 1:1093900/150‑1 (MQ=255) gACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTg > 1:1261538/1‑150 (MQ=255) aaTCCAGGGCCTGCGGTATAGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAAt > 2:1115754/1‑150 (MQ=255) cAGGGCCTGCGGTATAGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCa < 1:1296202/150‑1 (MQ=255) cAGGGCCTGCGGTATAGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCa > 1:119569/1‑150 (MQ=255) aGGGCCTGCGGTATAGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAc < 1:1254754/150‑1 (MQ=255) cTGCGGTATAGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGAc < 1:1039554/150‑1 (MQ=255) cGGTATAGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAG‑GTGAAATTGCACGCTGACtac < 2:470219/150‑2 (MQ=255) gTATAGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAG‑GTGAAATTGCACGCTGACtacgg < 1:1223672/150‑4 (MQ=255) tataGGCCACTGCATCAATGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACa < 1:848462/150‑1 (MQ=255) tataGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAG‑GTGAAATTGCACGCTGACtacggc < 2:432476/150‑5 (MQ=255) ataGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACaa > 2:1046426/1‑150 (MQ=255) ggCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAAttg < 1:556914/150‑1 (MQ=255) aaTTTCTTTTGCCATTAAAACAAACTCCTTTAACGCAACCTGGATCAACGCTACTTTTTTACGCACATAATCTCGTGAAGACAGTTCAGGAACGACGCCGCCGTAATCAACTTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACaa > 2:609537/1‑150 (MQ=255) aaTGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACaa > 1:1387370/1‑150 (MQ=255) tGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAc < 2:142381/121‑1 (MQ=255) tGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAc > 1:142381/1‑121 (MQ=255) cTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCtt > 2:1337441/1‑150 (MQ=255) cTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCtt > 2:373242/1‑150 (MQ=255) tttGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCtttt < 1:920015/150‑1 (MQ=255) tttGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCtttt < 1:1239485/150‑1 (MQ=255) ttGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCttttt < 1:90859/150‑1 (MQ=255) ttGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCttttt < 1:981240/150‑1 (MQ=255) gCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCa > 1:458839/1‑150 (MQ=255) ccGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCTGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCAt < 1:1297254/150‑1 (MQ=255) ccGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCAt > 1:506854/1‑150 (MQ=255) cGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCAtc > 2:143078/1‑150 (MQ=255) cGTTAAACAAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCAtc > 2:745726/1‑150 (MQ=255) aaaCCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCAtcgtcg > 2:797125/1‑150 (MQ=255) aaaCCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCAtcgtcg < 2:236213/150‑1 (MQ=255) aaaCCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACACCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCAtcgtcg < 1:923454/150‑1 (MQ=255) aCCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTa < 1:1316993/150‑1 (MQ=255) ccAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTaa > 2:913864/1‑150 (MQ=255) aGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAAt < 1:33368/150‑1 (MQ=255) cTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGc > 1:290650/1‑150 (MQ=255) cTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGAt > 2:1418802/1‑150 (MQ=255) aGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCg > 2:928076/1‑150 (MQ=255) gcgcCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCgg > 2:1410618/1‑150 (MQ=255) cgccgcCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGt > 2:1115555/1‑150 (MQ=255) gccgccTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGtt < 1:1419813/150‑1 (MQ=255) cgccTGGATCACCGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTGCAGGCACGACGCCGCCGTAGGCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTc < 2:576852/150‑1 (MQ=255) cgccTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTc < 1:1115555/150‑1 (MQ=255) gccTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCa > 2:908929/1‑150 (MQ=255) cTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATc > 1:588532/1‑150 (MQ=255) ggATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGc < 2:1070111/150‑1 (MQ=255) gATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCa > 2:876105/1‑150 (MQ=255) gATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCa > 1:808935/1‑150 (MQ=255) acggtTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCa < 1:1321703/150‑1 (MQ=255) acggtTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCa < 1:1165065/150‑1 (MQ=255) gtTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATa > 1:1201738/1‑150 (MQ=255) tttACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATAcc < 1:797125/150‑1 (MQ=255) tttACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATAcc < 1:1379598/150‑1 (MQ=255) tttACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATAcc < 1:1368121/150‑1 (MQ=255) tACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCa < 1:1046426/150‑1 (MQ=255) cGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGt > 1:4917/1‑150 (MQ=255) cGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACATTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGt > 2:489879/1‑150 (MQ=255) cacaTGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTac < 2:119569/150‑1 (MQ=255) acaTGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTaca < 1:537575/150‑1 (MQ=255) aTCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCAt < 1:1115754/150‑1 (MQ=255) cgctGGATGACATTTCAGGAACGACTCAGCCTTAGTCAGCGTGAAATTTCAC‑CTGACTAAACAATTTGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGa > 2:350913/1‑150 (MQ=255) cgGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACt < 1:373242/150‑1 (MQ=255) ggAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTg < 1:724815/150‑1 (MQ=255) ggCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGc < 1:710938/139‑1 (MQ=255) ggCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGc > 2:710938/1‑139 (MQ=255) ggCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGttt < 1:143078/150‑1 (MQ=255) gCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGtttt < 2:1192585/150‑1 (MQ=255) ccAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTa < 1:913864/150‑1 (MQ=255) aGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTAcc < 1:1157441/150‑1 (MQ=255) gTTCAGGCACGACGCCGCCGTAGTCAGAGTGCAATTTCAC‑CTGACTATACAATTGGTTGGATAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCt > 2:505587/1‑150 (MQ=255) gCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCACCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCttt > 1:222642/1‑150 (MQ=255) cACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCTtta < 2:1387370/150‑1 (MQ=255) cACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCTtta > 1:1412474/1‑150 (MQ=255) cgacgCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCTttatt < 1:1410618/150‑1 (MQ=255) cgacgCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCTttatt < 1:641485/150‑1 (MQ=255) cgccgcCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTATCAAACCTTTTTCATCGTCGTAAATGGTGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCTTTATTAcc > 2:1235927/1‑150 (MQ=255) cgccgTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGTCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTAc < 1:613644/133‑1 (MQ=255) cgccgTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTCGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGTCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTAc > 2:613644/1‑133 (MQ=255) gtatAGTCAG‑GTGAAATTGCACGCTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCTTTATTACCGCGCa > 2:806681/4‑150 (MQ=255) atAGTCAG‑GTGAAATTGCACGCTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCTTTATTACCGCGCAgt > 2:5453/2‑150 (MQ=255) tAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCTTTATTACCGCGCAgtg < 1:629654/150‑1 (MQ=255) gTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCTTTATTACCGCGCAGTGTa < 1:1394544/150‑1 (MQ=255) cAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCTTTATTACCGCGCAGTGTAgg > 2:1091922/1‑150 (MQ=255) cGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCTTTATTACCGCGCAGTGTAGGAcc < 1:609537/150‑1 (MQ=255) | CCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCTTTATTACCGCGCAGTGTAGGACC > NC_000913/3210287‑3210584 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |