New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3910357 =	116 (1.420)	6 (0.080)	6/264	NT	5.1%	coding (42/960 nt)	pstC	phosphate ABC transporter membrane subunit PstC
	?	NC_000913	3910380 =	112 (1.430)					coding (19/960 nt)	pstC	phosphate ABC transporter membrane subunit PstC

ACAGTAGCGGTAAGCCGCTGTACTAATAAAACTCCAGGCCGGGTACGGTGTTTTACGCCGCATCCGGCATTACAAAATGACTTTGTAAACGCGTTTAACTGAAGAGTAACTTATGGCTGCAACCAAGCCTGCTTTTAACCCACCGGGTAAAAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3910510‑3910357 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaagCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTC  >  NC_000913/3910380‑3910527                                                                                                                                                                                                                                                                                                                ACAGTAGCGGTAAGCCGCTGTACTAATAAAACTCCAGGCCGGGTACGGTGTTTTACGCCGCATCCGGCATTACAAAATGACTTTGTAAACGCGTTTAACTGAAGAGTAACTTATGGCTGCAACCAAGCCTGCTTTTAACCCACCGGGTAA                                                                                                                                                          >  1:569444/1‑150  CAGTAGCGGTAAGCCGCTGTACTAATAAAACTCCAGGCCGGGTACGGTGTTTTACGCCGCATCCGGCATTACAAAATGACTTTGTAAACGCGTTTAACTGAAGAGTAACTTATGGCTGCAACCAAGCCTGCTTTTAACCCACCGGGTAAA                                                                                                                                                         >  1:1175733/1‑150  CAGTAGCGGTAAGCCGCTGTACTAATAAAACTCCAGGCCGGGTACGGTGTTTTACGCCGCATCCGGCATTACAAAATGACTTTGTAAACGCGTTTAACTGAAGAGTAACTTATGGCTGCAACCAAGCCTGCTTTTAACCCACCGGGTAAA                                                                                                                                                         >  1:818623/1‑150  CAGTAGCGGTAAGCCGCTGTACTAATAAAACTCCAGGCCGGGTACGGTGTTTTACGCCGCATCCGGCATTACAAAATGACTTTGTAAACGCGTTTAACTGAAGAGTAACTTATGGCTGCAACCAAGCCTGCTTTTAACCCACCGGGTAAA                                                                                                                                                         >  2:1102416/1‑150  CAGTAGCGGTAAGCCGCTGTACTAATAAAACTCCAGGCCGGGTACGGTGTTTTACGCCGCATCCGGCATTACAAAATGACTTTGTAAACGCGTTTAACTGAAGAGTAACTTATGGCTGCAACCAAGCCTGCTTTTAACCCACCGGGTAAA                                                                                                                                                         >  2:474704/1‑150     TAGCGGTAAGCCGCTGTACTAATAAAACTCCAGGCCGGGTACGGTGTTTTACGCCGCATCCGGCATTACAAAATGACTTTGTAAACGCGTTTAACTGAAGAGTAACTTATGGCTGCAACCAAGCCTGCTTTTAACCCACCGGGCAAAAAG                                                                                                                                                      <  1:1064706/150‑1                       CTAATAAAACTCCAGGCCGGGTACGGTGTTTTACGCCGCATCCGGCATTACAAAATGACTTTGTAAACGCGTTTAACTGAAGAGTAACTTATGGCTGCAACCAAGCCTGCTTTTAACCCACCGGGTAAAAAGCAGGCTTGGTTGCAGCCA                                                                                                                                    >  1:614855/1‑150                                                                        ACAAAATGACTTTGTAAACGCGTTTAACTGAAGAGTAACTTATGGCTGCAACCAAGCCTGCTTTTAACCCACCGGGTAAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCG                                                                                   <  2:614855/150‑1                                                                        ACAAAATGACTTTGTAAACGCGTTTAACTGAAGAGTAACTTATGGCTGCAACCAAGCCTGCTTTTAACCCACCGGGTAAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCG                                                                                   >  2:590036/1‑150                                                                                     GTAAACGCGTTTAACTGAAGAGTAACTTATTGCTGCAACCAAGCCTGCTTTTAACCCACCGGGTAAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTTAACGCGTTTACAAAGTCATTTTTTAATGCCGGATGCGGCGTAAA                                                                      >  2:184231/1‑150                                                                                                            AACTTATGGCTGCAACCAAGCCTGCTTTTAACCCACCGGGTAAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTT                                               <  1:590036/150‑1                                                                                                                                CCTGCTTTTAACCCACCGGGTAAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACC                           >  2:2118/1‑150                                                                                                                                                       AAAGCAGGCTTGGTTGGAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCT    >  1:1400630/1‑150                                                                                                                                                       AAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCT    <  1:1073706/150‑1                                                                                                                                                       AAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCT    >  2:350180/1‑150                                                                                                                                                        AAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTT   <  2:662885/150‑1                                                                                                                                                         AGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTC  <  1:57578/150‑1                                                                                                                                                                                                                                                                                                                ACAGTAGCGGTAAGCCGCTGTACTAATAAAACTCCAGGCCGGGTACGGTGTTTTACGCCGCATCCGGCATTACAAAATGACTTTGTAAACGCGTTTAACTGAAGAGTAACTTATGGCTGCAACCAAGCCTGCTTTTAACCCACCGGGTAAAAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3910510‑3910357 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaagCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTC  >  NC_000913/3910380‑3910527

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.