New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 164843775 (0.920)4 (0.050) 4/260 NT 5.1% intergenic (+96/‑71) dicA/ydfA DNA‑binding transcriptional dual regulator DicA/Qin prophage; DUF1391 domain‑containing protein YdfA
?NC_000913 = 1648462 77 (1.000)intergenic (+121/‑46) dicA/ydfA DNA‑binding transcriptional dual regulator DicA/Qin prophage; DUF1391 domain‑containing protein YdfA

ATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGATCTTGGCAACAACGAATCTCTGGTGTACGGCGTGTTTCCAAACCAGGACGGCACGTTCACCGCAA  >  NC_000913/1648289‑1648586
                                                                                                                                                     |                                                                                                                                                     
aTAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCa                                                                                                                                                      <  2:594875/150‑1 (MQ=255)
 tAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCAt                                                                                                                                                     <  1:611310/150‑1 (MQ=255)
   aaCTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCa                                                                                                                                                   <  2:757763/150‑1 (MQ=255)
    aCTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCaa                                                                                                                                                  <  1:723176/150‑1 (MQ=255)
     ctctTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAac                                                                                                                                                 >  1:363800/1‑150 (MQ=255)
      tctTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAaca                                                                                                                                                <  1:839594/150‑1 (MQ=255)
       ctTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAacac                                                                                                                                               >  1:171841/1‑150 (MQ=255)
           gaagaaTTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCg                                                                                                                                           >  1:729346/1‑150 (MQ=255)
                aTTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACgg                                                                                                                                      <  1:882148/150‑1 (MQ=255)
                     tAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTtc                                                                                                                                 <  1:323539/150‑1 (MQ=255)
                     tAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTtc                                                                                                                                 >  1:885130/1‑150 (MQ=255)
                       aaaGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTtctc                                                                                                                               >  2:819886/1‑150 (MQ=255)
                       aaaGCCCGTCAGCGGACAAATAAAAGATAACATCAGCAATGAGTGATATTTTGCCGCAGCAATTATGTTAGGGATAGCAGTCAACATGGGTTGAGCGATATGTTAGTCATGGCTAATCTTGTTTGGCTCAACACGCCGCACGGTGTtctc                                                                                                                               >  2:1343619/1‑150 (MQ=255)
                         aGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAg                                                                                                                             >  1:1084870‑M2/1‑149 (MQ=255)
                            ccGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAgcaa                                                                                                                          >  1:1428766‑M2/1‑146 (MQ=255)
                            ccGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAgcaa                                                                                                                          >  2:272350‑M2/1‑146 (MQ=255)
                            ccGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAgcaa                                                                                                                          <  2:29061‑M2/150‑5 (MQ=255)
                            ccGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTAACAAATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAgcaa                                                                                                                          >  2:976223‑M2/1‑146 (MQ=255)
                              gTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCatcaacacaccgtgcggtgtgttgatgcaaa                                                                                                                        <  2:1095285‑M1/150‑32 (MQ=255)
                               tCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAgcaaaca                                                                                                                       >  2:619312‑M2/1‑143 (MQ=255)
                                cAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCtgagaacaccgtgcggtgtgttgatgcaaacaa                                                                                                                      <  2:775133‑M1/150‑34 (MQ=255)
                                     gACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTtct                                                                                                                                >  1:52608/1‑135 (MQ=255)
                                     gACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTtct                                                                                                                                <  2:52608/135‑1 (MQ=255)
                                      aCAAATAAAAGATAACATCAACAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTTCATCAACACACCGCTCGGTGTTCTCAGCAAACAGTTCCgg                                                                                                                <  2:885041/150‑2 (MQ=255)
                                         aaTAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTAc                                                                                                             >  1:1381938/1‑150 (MQ=255)
                                          aTAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCtgagaacaccgtgcggtgtgttgatgca                                                                                                                           <  2:772278‑M1/135‑29 (MQ=255)
                                          aTAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCtgagaacaccgtgcggtgtgttgatgca                                                                                                                           >  1:772278‑M1/1‑107 (MQ=255)
                                          aTAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTAcc                                                                                                            <  1:880666/150‑1 (MQ=255)
                                          aTAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTAcc                                                                                                            <  2:188534/150‑1 (MQ=255)
                                            aaaaGATAACTCATTGATGATGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTAcccc                                                                                                          >  1:1142840/1‑150 (MQ=255)
                                                 aTAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGt                                                                                                     <  2:798902/150‑1 (MQ=255)
                                                    aCATCATCAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATAAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTaa                                                                                                  >  1:768005/1‑150 (MQ=255)
                                                     catcatCAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAg                                                                                                 <  1:101637/150‑1 (MQ=255)
                                                     catcatCAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTATCAGCAAACAGTTACGATACCCCAGCGTTAAg                                                                                                 >  2:999042/1‑150 (MQ=255)
                                                      atcatcAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAgg                                                                                                <  1:1414605/150‑1 (MQ=255)
                                                       tcatcaATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAggg                                                                                               >  2:697327/1‑150 (MQ=255)
                                                           caATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGaaa                                                                                           <  2:783635/150‑1 (MQ=255)
                                                             aTGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAATGGGAAATg                                                                                         >  1:1379510/1‑150 (MQ=255)
                                                                aGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAgg                                                                                      <  2:1125123/150‑1 (MQ=255)
                                                                aGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAgg                                                                                      >  1:42015/1‑150 (MQ=255)
                                                                  gTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTAGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACAACGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAACGGGAAATGAGGt                                                                                     >  1:893651/1‑150 (MQ=255)
                                                                   ttATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTc                                                                                    >  2:783043/1‑150 (MQ=255)
                                                                   ttATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTc                                                                                    <  2:1235174/150‑1 (MQ=255)
                                                                    tATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCAGCGTTAAGGGGAAATGAGGTCAg                                                                                  <  1:805613/150‑1 (MQ=255)
                                                                     aTCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAg                                                                                  >  1:305159/1‑150 (MQ=255)
                                                                       cTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCa                                                                                >  1:942432/1‑150 (MQ=255)
                                                                       cTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCa                                                                                >  2:694372/1‑150 (MQ=255)
                                                                           tACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGa                                                                            >  1:1284654/1‑150 (MQ=255)
                                                                           tACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGa                                                                            >  1:501693/1‑150 (MQ=255)
                                                                             ccACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATa                                                                          >  1:393298/1‑150 (MQ=255)
                                                                                caTCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCGCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTa                                                                       >  2:123302/1‑150 (MQ=255)
                                                                                  tCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATc                                                                     <  1:783043/150‑1 (MQ=255)
                                                                                  tCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATc                                                                     <  1:189872/150‑1 (MQ=255)
                                                                                   cAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACTGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCg                                                                    >  2:829944/1‑150 (MQ=255)
                                                                                   cAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCg                                                                    >  2:809225/1‑150 (MQ=255)
                                                                                   cAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCg                                                                    >  2:829942/1‑150 (MQ=255)
                                                                                    aaTTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGa                                                                   <  2:685376/150‑1 (MQ=255)
                                                                                    aaTTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGa                                                                   >  1:310713/1‑150 (MQ=255)
                                                                                      ttATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGATc                                                                 <  2:1147062/150‑1 (MQ=255)
                                                                                        aTGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGATCtt                                                               <  1:89313/150‑1 (MQ=255)
                                                                                          gTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGATCTTgg                                                             <  2:609812/150‑1 (MQ=255)
                                                                                           ttAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGATCTTGGc                                                            <  2:1381938/150‑1 (MQ=255)
                                                                                              gCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGATCTTGGcaac                                                         >  1:1370788/1‑150 (MQ=255)
                                                                                               cTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGATCTTGGcaaca                                                        >  2:782963/1‑150 (MQ=255)
                                                                                               cTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGATCTTGGcaaca                                                        <  1:697327/150‑1 (MQ=255)
                                                                                               cTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGATCTTGGcaaca                                                        >  1:1210255/1‑150 (MQ=255)
                                                                                                tataGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGATCTTGGcaacaa                                                       >  2:196686/1‑150 (MQ=255)
                                                                                                 ataGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGATCTTGGCaacaac                                                      >  1:1158635/1‑150 (MQ=255)
                                                                                                       tACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGATCTTGGCAACAACGAAtct                                                >  1:654775/1‑150 (MQ=255)
                                                                                                         cAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGATCTTGGCaacaac                                                      >  1:431573/1‑142 (MQ=255)
                                                                                                         cAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGATCTTGGCaacaac                                                      <  2:431573/142‑1 (MQ=255)
                                                                                                         cAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGATCTTGGCAACAACGAATctct                                              >  2:737045/1‑150 (MQ=255)
                                                                                                         cAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGATCGTGGCAACAACGAATctct                                              >  2:825337/1‑150 (MQ=255)
                                                                                                           aaaTCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAATGGGAAATGAGGTCAGCATGGATACTATCGATCTTGGCAACAACGAATCTCTgg                                            <  2:1379510/150‑1 (MQ=255)
                                                                                                           aaaTCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGATGTCAGCATGGATACTATCGATCTTGGCAACAACGAATCTCTgg                                            <  1:999042/150‑1 (MQ=255)
                                                                                                           aaaTCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGATCTTGGCAACAACGAATCTCTgg                                            <  2:729346/150‑1 (MQ=255)
                                                                                                              tCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACTGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGATCTTGGCAACAACGAATCTCTGgtgt                                         <  2:885130/150‑1 (MQ=255)
                                                                                                                    gACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGATCTTGGCAACAACGAATCTCTGGTGTACGGCg                                   >  2:515894/1‑150 (MQ=255)
                                                                                                                     ccgatcttGTTAGTCATGGCTAATCTTGTTTGCATCAAGACACCGCAAGGTGTTCTCAGCAAACAGTTGCGCTACCCCAGCGTTAAGTGGAAATGAGGTCAACATGGATACTATCGATCTTTGCAACAACGAATCTCTGGTGTACGGCgt                                  <  2:18791/143‑1 (MQ=255)
                                                                                                                         atatGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGATCTTGGCAACAACGAATCTCTGGTGTACGGCGTGttt                              <  2:886259/150‑1 (MQ=255)
                                                                                                                          tatGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGATCTTGGCAACAACGAATCTCTGGTGTACGGCGTGTTTc                             <  2:501693/150‑1 (MQ=255)
                                                                                                                           atGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGATCTTGGCAACAACGAATCTCTGGTGTACGGCGTGTTTcc                            <  1:819886/150‑1 (MQ=255)
                                                                                                                           atGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGATCTTGGCAACAACGAATCTCTGGTGTACGGCGTGTTTcc                            <  1:29061/150‑1 (MQ=255)
                                                                                                                            tGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGATCTTGGCAACAACGAATCTCTGGTGTACGGCGTGTTTCCa                           >  2:500069/1‑150 (MQ=255)
                                                                                                                            tGTTAGTCATGGCTAATCTTGTTTGAATCAACACCACGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAACATGGATACTATCGATCTTGGCAACAACGAATCTCTGGTGTACGGCgtagatcgg                           >  1:18791/1‑143 (MQ=255)
                                                                                                                             gTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGATCTTGGCAACAACGAATCTCTGGTGTACGGCGTGTTTCCaa                          >  1:703190/1‑150 (MQ=255)
                                                                                                                              ttAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGATCTTGGCAACAACGAATCTCTGGTGTACGGCGTGTTTCCaaa                         <  2:1142840/150‑1 (MQ=255)
                                                                                                                                       gCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGATCTTGGCAACAACGAATCTCTGGTGTACGGCGTGTTTCCAAACCAGGACgg                >  2:10849/1‑150 (MQ=255)
                                                                                                                                          aaTCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGATCTTGGCAACAACGAATCTCTGGTGTACGGCGTGTTTCCAAACCAGGACGGCAc             >  2:921548/1‑150 (MQ=255)
                                                                                                                                              ttGTTTGCATCAACACACCGCACGGTGTTCTCAgcaaacaagattagccatgactaacatatcggtcaagtgattttgtatgctatagctaacataattgatgtggtaaaagataactcattgatgatgttatcttttatttgtccgctg         <  2:775133‑M2/150‑118 (MQ=255)
                                                                                                                                               tGTTTGCtgagaacaccgtgcggtgtgttgatgcaaacaagattagccatgactaacatatcggtcaagtgattttgtatgctatagctaacataattgatgtggtaaaagataactcattgatgatgttatcttttatttgtccgctga        >  2:619312‑M1/1‑7 (MQ=255)
                                                                                                                                                 tttGCATCAACACACCGCACGGTGTGTTGAtgcaaacaagattagccatgactaacatatcggtcaagtgattttgtatgctatagctaacataattgatgtggtaaaagataactcattgatgatgttatcttttatttgtccgctgac      <  2:1095285‑M2/150‑121 (MQ=255)
                                                                                                                                                  ttGCtgagaacaccgtgcggtgtgttgatgcaaacaagattagccatgactaacatatcggtcaagtgattttgtatgctatagctaacataattgatttgttaaaagataactcattgatgatgttatcttttatttgtccgctgacgg     >  2:976223‑M1/1‑4 (MQ=255)
                                                                                                                                                  ttGCtgagaacaccgtgcggtgtgttgatgcaaacaagattagccatgactaacatatcggtcaagtgattttgtatgctatagctaacataattgatgtggtaaaagataactcattgatgatgttatcttttatttgtccgctgacgg     >  1:1428766‑M1/1‑4 (MQ=255)
                                                                                                                                                  ttGCtgagaacaccgtgcggtgtgttgatgcaaacaagattagccatgactaacatatcggtcaagtgattttgtatgctatagctaacataattgatgtggtaaaagataactcattgatgatgttatcttttatttgtccgctgacgg     <  2:29061‑M1/150‑147 (MQ=255)
                                                                                                                                                  ttGCtgagaacaccgtgcggtgtgttgatgcaaacaagattagccatgactaacatatcggtcaagtgattttgtatgctatagctaacataattgatgtggtaaaagataactcattgatgatgttatcttttatttgtccgctgacgg     >  2:272350‑M1/1‑4 (MQ=255)
                                                                                                                                                   tGCATCAACACACCGCACGGTGTTCTCAgcaaacaagattagccatgactaacatatcggtcaagtgattttgtatgctatagctaacataattgatgtggtaaaagataactcattgatgatgttatcttttat                   <  2:772278‑M2/135‑108 (MQ=255)
                                                                                                                                                   tGCATCAACACACCGCACGGTGTTCTCAgcaaacaagattagccatgactaacatatcggtcaagtgattttgtatgctatagctaacataattgatgtggtaaaagataactcattgatgatgttatcttttat                   >  1:772278‑M2/1‑28 (MQ=255)
                                                                                                                                                     ctgagaacaccgtgcggtgtgttgatgcaaacaagattagccatgactaacatatcggtcaagtgattttgtatgctatagctaacataattgatgtggtaaaagataactcattgatgatgttatcttttatttgtccgctgacgggct  >  1:1084870‑M1/1‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
ATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATGTTAGCTATAGCATACAAAATCACTTGACCGATATGTTAGTCATGGCTAATCTTGTTTGCATCAACACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCCAGCGTTAAGGGGAAATGAGGTCAGCATGGATACTATCGATCTTGGCAACAACGAATCTCTGGTGTACGGCGTGTTTCCAAACCAGGACGGCACGTTCACCGCAA  >  NC_000913/1648289‑1648586

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.