New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1947994 =	52 (0.640)	3 (0.040)	3/264	NT	6.1%	coding (158/741 nt)	yebC	putative transcriptional regulator YebC
	?	NC_000913	1948053 =	43 (0.550)					coding (99/741 nt)	yebC	putative transcriptional regulator YebC

CCATGTTTGCATCATCATCACCGCCCACACCACGTGCAATTGCGCGGTTCAGTGTGTCACGGGTCATGTTGTTAGACAGTGCTTTATCCACCGCCGCACGCAGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTGCGCAGCTTTACGATGTCTGGTGTTGGCCCATTTACTATGACCTGCCATAAAAATATCTCCAGATAGCCCTGCCTGTTCAGGCAGCGTTAATTACAA  >  NC_000913/1947905‑1948199                                                                                                                                                     |                                                                                                                                                   ccATGTTTGCATCATCATCACCGCCCACACCACGTGCAATTGCGCGGTTCAGTGTGTCACGGGTCATGTTGTTAGACAGTGCTTTATCCACCGCCGCACGCAGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTa                                                                                                                                                   >  2:136043/1‑150 (MQ=255)      aaatgggccaacaccagacatcttaaagctgctcaggatgctaagcgcggtaaaatcttcactaaaatcattcgtgagctggtaACCGCCGCACGCAGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGc                                                                                                                                              >  2:1262845‑M1/85‑150 (MQ=255)             catcatcaCCGCCCACACCACGTGCAATTGCGCGGTTCAGTGTGTCACGGGTCATGTTGTTAGACAGTGCTTTATCCACCGCCGCACGCAGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGaa                                                                                                                                       >  2:645047/1‑150 (MQ=255)               tcatcaCCGCCCACACCACGTGCAATTGCGCGGTTCAGTGTGTCACGGGTCATGTTGTTAGACAGTGCTTTATCCACCGCCGCACGCAGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATg                                                                                                                                     >  2:1400114/1‑150 (MQ=255)                 atcaCCGCCCACACCACGTGCAATTGCGCGGTTCAGTGTGTCACGGGTCATGTTGTTAGACAGTGCTTTATCCACCGCCGCACGCAGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGAt                                                                                                                                   >  2:837390/1‑150 (MQ=255)                    aCCGCCCACACCACGTGCAATTGCGCGGTTCAGTGTGTCACGGGTCATGTTGTTAGACAGTGCTTTATCCACCGCCGCACGCAGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGAtttt                                                                                                                                >  1:566461/1‑150 (MQ=255)                      cGCCCACACCACGTGCAATTGCGCGGTTCAGTGTGTCACGGGTCATGTTGTTAGACAGTGCTTTATCCACCGCCGCACGCAGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAg                                                                                                                              <  2:762356/150‑1 (MQ=255)                       gCCCACACCACGTGCAATTGCGCGGTTCAGTGTGTCACGGGTCATGTTGTTAGACAGTGCTTTATCCACCGCCGCACGCAGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGt                                                                                                                             >  1:198874/1‑150 (MQ=255)                            caccacGTGCAATTGCGCGGTTCAGTGTGTCACGGGTCATGTTGTTAGACAGTGCTTTATCCACCGCCGCACGCAGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCCGTTACCAGCTCACCAATCATTTTAGTGAAGa                                                                                                                        >  2:742409/1‑150 (MQ=255)                                 cGTGCAATTGCGCGGTTCAGTGTGTCACGGGTCATGTTGTTAGACAGTGCTTTATCCACCGCCGCACGCAGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTa                                                                                                                   >  1:1323491/1‑150 (MQ=255)                                  gTGCAATTGCGCGGTTCAGTGTGTCACGGGTCATGTTGTTAGACAGTGCTTTATCCACCGCCGCACGCAGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTAc                                                                                                                  <  1:1149845/150‑1 (MQ=255)                                      gcaggatgctaagcgcggtaaaatcttcactaaaatcattcgtgagctggtaACCGCCGCACGCAGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTAcc                                                                                                                                                 >  2:676723‑M1/53‑115 (MQ=255)                                      gcaggatgctaagcgcggtaaaatcttcactaaaatcattcgtgagctggtaACCGCCGCACGCAGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTAcc                                                                                                                                                 <  1:676723‑M1/63‑1 (MQ=255)                                          gcgcGGTTCAGTGTGTCACGGGTCATGTTGTTAGACAGTGCTTTATCCACCGCCGCACGCAGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTa                                                                                                          >  1:559880/1‑150 (MQ=255)                                                   aGTGTGTCACGGGTCATGTTGTTAGACAGTGCTTTATCCACCGCCGCACGCAGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTgc                                                                                                 >  2:960157/1‑150 (MQ=255)                                                       tgtCACGGGTCATGTTGTTAGACAGTGCTTTATCCACCGCCGCACGCAGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTGCGCAg                                                                                             <  2:1002470/150‑1 (MQ=255)                                                        gtCACGGGTCATGTTGTTAGACAGTGCTTTATCCACCGCCGCACGCAGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTGCGCAGc                                                                                            <  1:136043/150‑1 (MQ=255)                                                           aCGGGTCATGTTGTTAGACAGTGCTTTATCCACCGCCGCACGCAGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTGCGCAGCttt                                                                                         <  2:54798/150‑1 (MQ=255)                                                                   tgttgtTAGACAGTGCTTTATCCACCGCCGCACGCAGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTGCGCAGCTTTACGATGTc                                                                                 <  1:1400114/150‑1 (MQ=255)                                                                         tAGACAGTGCTTTATCCACCGCCGCACGCAGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTGCGCAGCTTTACGATGTCTGgtgt                                                                           >  1:70709/1‑150 (MQ=255)                                                                          tgACAGTGCTTTATCCACCGCCGCACGCAGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTGCGCAGCTTTACGATGTCTGGTGtt                                                                          <  1:742409/149‑1 (MQ=255)                                                                            aCAGTGCTTTATCCACCGCCGCACGCAGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTGCGCAGCTTTACGATGTCTGGTGTTgg                                                                        >  2:86594/1‑150 (MQ=255)                                                                             cAGTGCTTTATCCACCGCCGCACGCAGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTGCGCAGCTTTACGATGTCTGGTGTTGGc                                                                       >  1:849770/1‑150 (MQ=255)                                                                             cAGTGCTTTATCCACCGCCGCACGCAGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTGCGCAGCTTTACGATGTCTGGTGTTGGc                                                                       >  1:1276538/1‑150 (MQ=255)                                                                             cAGTGCTTTATCCACCGCCGCACGCAGACGC‑GGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTGCGCAGCTTTACGATGTCTGGTGTTGGcc                                                                      <  2:17608/150‑1 (MQ=255)                                                                                tGCTTTATCCACCGCCGCACGCAGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTGCGCAGCTTTACGATGTCTGGTGTTGGCCCa                                                                    <  1:856303/150‑1 (MQ=255)                                                                                tGCTTTATCCACCGCCGCACGCAGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTGCGCAGCTTTACGATGTCTGGTGTTGGCCCa                                                                    <  1:992789/150‑1 (MQ=255)                                                                                   tttATCCACCGCCGCACGCAGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTGCGCAGCTTTACGATGTCTGGTGTTGGCCCAttt                                                                 <  2:80899/150‑1 (MQ=255)                                                                                   tttATCCACCGCCGCACGCAGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTGCGCAGCTTTACGATGTCTGGTGTTGGCCCAttt                                                                 >  1:263700/1‑150 (MQ=255)                                                                                   gctggtaaccgcggctaagctgggcggtggcgatccggacgctaacccgcgtctgcgtgcggcggtTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTGAGCAGCTTTAAGATGTCTGGTGTTGGCCCAttt                                                                 >  2:1262845‑M2/67‑150 (MQ=255)                                                                                    ttATCCACCGCCGCACGCAGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGAtttt                                                                                                                    >  1:1344492/1‑98 (MQ=255)                                                                                    ttATCCACCGCCGCACGCAGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGAtttt                                                                                                                    <  2:1344492/98‑1 (MQ=255)                                                                                      ggtaaccgcggctaagctgggcggtggcgatccggacgctaacccgcgtctgcgtgcggcggtTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTgc                                                                                                 >  2:676723‑M2/64‑115 (MQ=255)                                                                                      ggtaaccgcggctaagctgggcggtggcgatccggacgctaacccgcgtctgcgtgcggcggtTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTgc                                                                                                 <  1:676723‑M2/52‑1 (MQ=255)                                                                                         cACCGCCGCACGCAGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTGCGCAGCTTTACGATGTCTGGTGTTGGCCCATTTACTATg                                                           >  2:1194165/1‑150 (MQ=255)                                                                                                 cacgcaGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTGCGCAGCTTTACGATGTCTGGTGTTGGCCCATTTACTATGACCTGCCa                                                   <  2:486488/150‑1 (MQ=255)                                                                                                     caGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTGCGCAGCTTTACGATGTCTGGTGTTGGCCCATTTACTATGACCTGCCATaaa                                               >  1:648087/1‑150 (MQ=255)                                                                                                      aGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTGCGCAGCTTTACGATGTCTGGTGTTGGCCCATTTACTATGACCTGCCATaaaa                                              <  1:1010105/150‑1 (MQ=255)                                                                                                       gACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATTCTGCGCAGCTTTACGATGTCTGGTGTTGGCCCATTTACTATGACCTGCCATaaaaa                                             <  1:1250378/150‑1 (MQ=255)                                                                                                         cgcgGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATTCTGCGCAGCTTTACGATGTCTGGTGTTGGCCCATTTACTATGACCTGCCATAAAAata                                           >  1:892827/1‑150 (MQ=255)                                                                                                                  gCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTGCGCAGCTTTACGATGTCTGGTGTTGGCCCATTTACTATGACCTGCCATAAAAATATCTCCAGAt                                  >  2:670149/1‑150 (MQ=255)                                                                                                                       cGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTGCGCAGCTTTACGATGTCTGGTGTTGGCCCATTTACTATGACCTGCCATAAAAATATCTCCAGATAGccc                             <  2:566461/150‑1 (MQ=255)                                                                                                                           tCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTGCGCAGCTTTACGATGTCTGGTGTTGGCCCATTTACTATGACCTGCCATAAAAATATCTCCAGATAGCcctgcc                         <  1:215224/150‑1 (MQ=255)                                                                                                                           gcGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTGCGCAGCTTTACGATGTCTGGTGTTGGCCCATTTACTATGACCTGCCATAAAAATATCTCCAGATAGCcctgcc                         <  2:788905/149‑1 (MQ=255)                                                                                                                              ccACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTGCGCAGCTTTACGATGTCTGGTGTTGGCCCATTTACTATGACCTGCCATAAAAATATCTCCAGATAGCCCTGCCTGt                      >  2:848695/1‑150 (MQ=255)                                                                                                                                aCCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTGCGCAGCTTTACGATGTCTGGTGTTGGCCCATTTACTATGACCTGCCATAAAAATATCTCCAGATAGCCCTGCCTGTTc                    <  2:1248878/150‑1 (MQ=255)                                                                                                                                 ccGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTGCGCAGCTTTACGATGTCTGGTGTTGGCCCATTTACTATGACCTGCCATAAAAATATCTCCAGATAGCCCTGCCTGTTCa                   <  2:1323491/150‑1 (MQ=255)                                                                                                                                  cGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTGCGCAGCTTTACGATGTCTGGTGTTGGCCCATTTACTATGACCTGCCATAAAAATATCTCCAGATAGCCCTGCCTGTTCAg                  <  1:645047/150‑1 (MQ=255)                                                                                                                                        gCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTGCGCAGCTTTACGATGTCTGGTGTTGGCCCATTTACTATGACATGCCATAAAAATATCTCCAGATAGCCCTGCCTGTTCAGGCAGCg            >  2:1412388/1‑150 (MQ=255)                                                                                                                                         cTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTGCGCAGCTTTACGATGTCTGGTGTTGGCCCATTTACTATGACCTGCCATAAAAATATCTCCAGATAGCCCTGCCTGAACAGGCAgggc           <  2:263700/150‑4 (MQ=255)                                                                                                                                           tAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTGCGCAGCTTTACGATGTCTGGTGTTGGCCCATTTACTATGACCTGCCATAAAAATATCTCCAGATAGCCCTGCCTGTTCAGGCAGCGTTa         >  1:99142/1‑150 (MQ=255)                                                                                                                                           tAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTGCGCAGCTTTACGATGTCTGGTGTTGGCCCATTTACTATGACCTGCCATAAAAATATCTCCAGATAGCCCTGCCTGTTCAGGCAGCGTTa         <  2:849770/150‑1 (MQ=255)                                                                                                                                                  ggtTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTGCGCAGCTTTACGATGTCTGGTGTTGTCCCATTTACTATGACCTGCCATAAAAATATCTCCAGATAGCCCTGCCTGTTCAGGCAGCGTTAATTACaa  <  1:837390‑M2/147‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                   CCATGTTTGCATCATCATCACCGCCCACACCACGTGCAATTGCGCGGTTCAGTGTGTCACGGGTCATGTTGTTAGACAGTGCTTTATCCACCGCCGCACGCAGACGCGGGTTAGCGTCCGGATCGCCACCGCCCAGCTTAGCCGCGGTTACCAGCTCACGAATGATTTTAGTGAAGATTTTACCGCGCTTAGCATCCTGCGCAGCTTTACGATGTCTGGTGTTGGCCCATTTACTATGACCTGCCATAAAAATATCTCCAGATAGCCCTGCCTGTTCAGGCAGCGTTAATTACAA  >  NC_000913/1947905‑1948199

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.