New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2569521 =	54 (0.660)	4 (0.050)	4/264	NT	7.8%	coding (817/837 nt)	eutJ	putative chaperonin, ethanolamine utilization protein
	?	NC_000913	2569558 =	42 (0.540)					coding (780/837 nt)	eutJ	putative chaperonin, ethanolamine utilization protein

CGGACCGCAAAGCGTCACCGGTGGAACGCTAAATGTTTTTACCCGTTGCAGATTCAGGGTATCGAACGCCTGAAAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGAATTGTTTGCGAAACAGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGT  >  NC_000913/2569410‑2569706                                                                                                                                                     |                                                                                                                                                     cGGACCGCAAAGCGTCACCGGTGGAACGCTAAATGTTTTTACCCGTTGCAGATTCAGGGTATCGAACGCCTGAAAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCgggg                                                                                                                                                     >  2:1039252/1‑150 (MQ=255) cGGACCGCAAAGCGTCACCGGTGGAACGCTAAATGTTTTTACCCGTTGCAGATTCAGGGTATCGAACGCCTGAAAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCgggg                                                                                                                                                     >  2:1129676/1‑150 (MQ=255)   gACCGCTAAGGTTCACCGGTGGAAAGCTAAATGTTTTTACCAGTTGCAGATTCTGGGTATCGAACGCCTTAAAGAGCGCGGGCTGCAAATCATTTTGCATATAGCCCCTCCGCTTTCTCTCCCCCTGTACTTGCGATCGCCAGCGGGGTc                                                                                                                                                   <  1:907000/150‑1 (MQ=255)    ttatggctggcgggcggctcttgtatgcaaccgggcgtggcggaactgtttcgcaaacaattcccggcgttacaggtgcatttaccgcagcacagtttgtttatgaccCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCa                                                                                                                                                  >  1:420177‑M1/109‑150 (MQ=255)    aCCTCAAAGCGTCAGCGGTGGAACGCTAATTGTTTTTACCCGTTGCAGATTCAGGGTATCGAACGCCTGAAAGAGCGCTGTCTGCAATTCATTTTGCATATAGCGCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCa                                                                                                                                                  <  2:1064138/150‑1 (MQ=255)     ccGCAAAGCGTCACCGGTGGAACGCTAAATGTTTTTACCCGTTGCAGATTCAGGGTATCGAACGCCTGAAAGAGCGCGGTCTGCAATTCATTTTGCATATACCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCAt                                                                                                                                                 >  2:813727/1‑150 (MQ=255)      cGCAAAGCGTCACCGGTGGAACGCTAAATGTTTTTACCCGTTGCAGATTCAGGGTATCGAACGCCTGAAAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATa                                                                                                                                                <  2:437787/150‑1 (MQ=255)        cAAAGCGTCACCGGTGGAACGCTAAATGTTTTTACCCGTTGCAGATTCAGGGTATCGAACGCCTGAAAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATaaa                                                                                                                                              >  1:765051/1‑150 (MQ=255)           tggcgggcggctcttgtatgcaaccgggcgtggcggaactgtttcgcaaacaattcccggcgttacaggtgcatttaccgcagcacagtttgtttatgaccCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATaaacaa                                                                                                                                           >  1:194257‑M1/102‑150 (MQ=255)             ggTCACCGGTGGAACGCTAAATGTTTTTACCCGTTGCAGATTCAGGGTATCGAACGCCTGAAAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATaaacaaac                                                                                                                                         <  2:1277618/149‑1 (MQ=255)               tCACCGGTGGAACGCTAAATGTTTTTACCCGTTGCAGATTCAGGGTATCGAACGCCTGAAAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATAAACAAACtg                                                                                                                                       <  1:666953/150‑1 (MQ=255)               tCACCGGTGGAACGCTAAATGTTTTTACCCGTTGCAGATTCAGGGTATCGAACGCCTGAAAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATAAACAAACtg                                                                                                                                       >  1:1168454/1‑150 (MQ=255)                cACCGGTGGAACGCTAAATGTTTTTACCCGTTGCAGATTCAGGGTATCGAACGCCTGAAAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATAAACAAACtgt                                                                                                                                      >  1:638570/1‑150 (MQ=255)                   cGGTGGAACGCTAAATGTTTTTACCCGTTGCAGATTCAGGGTATCGAACGCCTGAAAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATAAACAAACTGtgct                                                                                                                                   <  2:217142/150‑1 (MQ=255)                     gTGGAACGCTAAATGTTTTTACCCGTTGCAGATTCAGGGTATCGAACGCCTGAAAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATAAACAAACTGtgctgc                                                                                                                                 <  2:181879/150‑1 (MQ=255)                       ggAACGCTAAATGTTTTTACCCGTTGCAGATTCAGGGTATCGAACGCCTGAAAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATAAACAAACTGTGCTGCgg                                                                                                                               >  1:959238/1‑150 (MQ=255)                          aCGCTAAATGTTTTTACCCGTTGCAGATTCAGGGTATCGAACGCCTGAAAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATAAACAAACTGTGCTGCGGTaa                                                                                                                            <  1:557982/150‑1 (MQ=255)                            gCTAAATGTTTTTACCCGTTGCAGATTCAGGGTATCGAACGCCTGAAAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATAAACAAACTGTGCTGCGGTAAAt                                                                                                                          >  1:1310985/1‑150 (MQ=255)                                     ttttACCCGTTGCAGATTCAGGGTATCGAACGCCTGAAAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTa                                                                                                                 <  2:765051/150‑1 (MQ=255)                                           ccGTTGCAGATTCAGGGTATCGAACGCCTGAAAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCTTAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCg                                                                                                           >  2:945121/1‑150 (MQ=255)                                              ttGCAGATTCAGGGTATCGAACGCCTGAAAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGa                                                                                                        <  1:1100475/150‑1 (MQ=255)                                               tGCAGATTCAGGGTATCGAACGCCTGAAAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTa                                                                                                                 <  2:323664/140‑1 (MQ=255)                                               tGCAGATTCAGGGTATCGAACGCCTGAAAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTa                                                                                                                 >  1:323664/1‑140 (MQ=255)                                                    aTTCAGGGTATCGAACGCCTGAAAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGAATTGtt                                                                                                  >  1:1171256/1‑150 (MQ=255)                                                     ttCAGGGTATCGAACGCCTGAAAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGAATTGttt                                                                                                 <  1:1315584/150‑1 (MQ=255)                                                      gcAGGGTATCGAACGCCTGAAAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGAACCCCAGCGGGGTCATAAACAAACAGTGCTGCGGTAAATGCACATGTAACGCCGGGAATTGTTTg                                                                                                >  2:1200193/2‑150 (MQ=255)                                                          ggTATCGAACGCCTGAAAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGAATTGTTTGCGaa                                                                                            <  2:1171451/150‑1 (MQ=255)                                                            tATCGAACGCCTGAAAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGAATTGTTTGCGAAAc                                                                                          <  1:219090/150‑1 (MQ=255)                                                               cGAACGCCTGAAAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGAATTGTTTGCGAAACAGt                                                                                       >  1:40893/1‑150 (MQ=255)                                                                gAACGCCTGAAAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGAATTGTTTGCGAAACAGtt                                                                                      >  2:127904/1‑150 (MQ=255)                                                                       tGAAAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGAATTGTTTGCGAAAc                                                                                          <  1:1357754/139‑1 (MQ=255)                                                                       tGAAAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGAATTGTTTGCGAAAc                                                                                          >  2:1357754/1‑139 (MQ=255)                                                                              gcgcGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGAATTGTTTGCGAAACAGTTCCGCCACGCCCGGt                                                                        >  1:1382935/1‑150 (MQ=255)                                                                                  ggTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGAATTGTTTGCGAAACAGTTCCGCCACGCCCGGTTGCa                                                                    <  2:1171256/150‑1 (MQ=255)                                                                                  ggTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGAATTGTTTGCGAAACAGTTCCGCCACGCCCGGTTGCa                                                                    <  1:945121/150‑1 (MQ=255)                                                                                   gTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGAATTGTTTGCGAAACAGTTCCGCCACGCCCGGTTGCAt                                                                   <  2:1168454/150‑1 (MQ=255)                                                                                   gTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGAATTGTTTGCGAAACAGTTCCGCCACGCCCGGTTGCAt                                                                   <  2:959238/150‑1 (MQ=255)                                                                                         aaTTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGAATTGTTTGCGAAACAGTTCCGCCACGCCCGGTTGCATACAaga                                                             <  1:127904/150‑1 (MQ=255)                                                                                           ttCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGAATTGTTTGCGAAACAGTTCCGCCACGCCCGGTTGCATACAAGAgc                                                           <  2:307889/150‑1 (MQ=255)                                                                                            tCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGAATTGTTTGCGAAACAGTTCCGCCACGCCCGGTTGCATACAAGAgcc                                                          <  2:638570/150‑1 (MQ=255)                                                                                             cATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGAATTGTTTGCGAAACAGTTCCGCCACGCCCGGTTGCATACAag                                                              >  2:776806/1‑145 (MQ=255)                                                                                             cATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGAATTGTTTGCGAAACAGTTCCGCCACGCCCGGTTGCATACAag                                                              <  1:776806/145‑1 (MQ=255)                                                                                              aTTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGAATTGTTTGCGAAACAGTTCCGCCACGCCCGGTTGCATACAAGAgccgc                                                        <  2:40893/150‑1 (MQ=255)                                                                                                    ttgtttatgaccccgctggcgatcgccagtagtgggcgagagaaagcggGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGAATTGTTTGCGAAACAGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCgcca                                                  >  1:194257‑M2/50‑150 (MQ=255)                                                                                                           tgaccccgctggcgatcgccagtagtgggcgagagaaagcggGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGAATTGTTTGCGAAACAGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATaa                                           >  1:420177‑M2/43‑150 (MQ=255)                                                                                                                ccgctggcgatcgccagtagtgggcgagagaaagcggGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGAATTGTTTGCGAAACAGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAg                                      >  1:520887‑M2/38‑150 (MQ=255)                                                                                                                    TTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGAATTGTTTGCGAAACAGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAAt                                  >  1:873477‑M1/1‑150 (MQ=255)                                                                                                                             gccACTAGTGGCGATCGCCAGCGGGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGAATTGTTTGCGAAACAGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAAtgccctgccc                         <  1:1369841/149‑1 (MQ=255)                                                                                                                             cccACTACTGGCGATCGCCAGCGGGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGAATTGTTTGCGACACAGTTCCGCCCCGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAAtgccctgccc                         >  1:1000194/1‑150 (MQ=255)                                                                                                                                  tactGGCGATCGCCAGCGGGGTCGTAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGAATTGTTTGCGAAACAGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCaa                    >  2:1083804/1‑150 (MQ=255)                                                                                                                                    ctGGCGATCGCCAGCGGGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGAATTGTTTGCGAAACAGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAata                  <  1:962102/150‑1 (MQ=255)                                                                                                                                      ggCGATCGCCAGCGGGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGAATTGTTTGCGAAACAGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATg                >  2:1307604/1‑150 (MQ=255)                                                                                                                                          agagaaagcggGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGAATTGTTTGCGAAACAGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCgg            <  2:194257‑M2/139‑1 (MQ=255)                                                                                                                                                agcggGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGAATTGTTTGCGAAACAGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACa      <  2:1368139‑M2/145‑1 (MQ=255)                                                                                                                                                agcggGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGAATTGTTTGCGAAACAGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACa      >  2:464498‑M2/6‑150 (MQ=255)                                                                                                                                                    gGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGAATTGTTTGCGAAACAGTTCCGCCCCGCCCGGTTGCATACAAGCGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAAGGt  >  2:662028‑M2/2‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                     CGGACCGCAAAGCGTCACCGGTGGAACGCTAAATGTTTTTACCCGTTGCAGATTCAGGGTATCGAACGCCTGAAAGAGCGCGGTCTGCAATTCATTTTGCATATAGCCCCTCCGCTTTCTCTCGCCCACTACTGGCGATCGCCAGCGGGGTCATAAACAAACTGTGCTGCGGTAAATGCACCTGTAACGCCGGGAATTGTTTGCGAAACAGTTCCGCCACGCCCGGTTGCATACAAGAGCCGCCCGCCAGCCATAAATCAGTAATGCCCTGCCCTTCAATATGCCGGGCGACAATGT  >  NC_000913/2569410‑2569706

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.