| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,716,509 | C→T | 7.4% | intergenic (‑115/‑38) | bisC ← / → yiaD | biotin sulfoxide reductase/PF13488 family lipoprotein YiaD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,716,509 | 0 | C | T | 7.4% | 331.7 / 11.3 | 108 | intergenic (‑115/‑38) | bisC/yiaD | biotin sulfoxide reductase/PF13488 family lipoprotein YiaD |
| Reads supporting (aligned to +/- strand): ref base C (41/59); new base T (2/6); total (43/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.73e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01 | |||||||||||
Only 100 of 110 total aligned reads displayed.
TCAGAACGGAATATCGTGAGGATGAGTTGGCCAAACCGAAGACTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGC > NC_000913/3716361‑3716653 | tCAGAACGGAATATCGTGAGGATGAGTTGGCCAAACCGAAGACTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAAcc > 1:1247456/1‑150 (MQ=255) cAGAACGGAATATCGTGAGGATGAGTTGGCCAAACCGAAGACTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAAccc > 2:599519/1‑150 (MQ=255) gAACGGAATATCGTGAGGATGAGTTGGCCAAACCGAAGACTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGt > 2:35733/1‑150 (MQ=255) gAACGGAATATCGTGAGGATGAGTTGGCCAAACCGAAGACTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGt > 1:697494/1‑150 (MQ=255) aaCGGAATATCGTGAGGATGAGTTGGCCAAACCGAAGACTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTg < 1:841887/150‑1 (MQ=255) aCGGAATATCGTGAGGATGAGTTGGCCAAACCGAAGACTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTgg > 1:1308127/1‑150 (MQ=255) cGGAATATCGTGAGGATGAGTTGGCCAAACCGAAGACTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGGTTCCGTGGc < 1:1171783/150‑1 (MQ=255) gAATATCGTGAGGATGAGTTGGCCAAACCGAAGACTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGGTTCCGTGGcgg < 2:713669/150‑3 (MQ=255) gAATATCGTGAGGATGAGTTGGCCAAACCGAAGACTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGGTTCCGTGGcgg < 2:762769/150‑3 (MQ=255) gAATATCGTGAGGATGAGTTGGCCAAACCGAAGACTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGGTTCCGTGGcgg < 1:175426/150‑3 (MQ=255) gAATATCGTGAGGATGAGTTGGCCAAACCGAAGACTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCaa > 1:391245/1‑150 (MQ=255) gAATATCGTGAGGATGAGTTGGCCAAACCGAAGACTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCaa > 1:1224506/1‑150 (MQ=255) aaTATCGTGAGGATGAGTTGGCCAAACCGAAGACTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGGTTCCGTGGcggg < 2:361184/150‑4 (MQ=255) atatCGTGAGGATGAGTTGGCCAAACCGAAGACTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGc > 2:1116589/1‑146 (MQ=255) atatCGTGAGGATGAGTTGGCCAAACCGAAGACTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGc < 1:1116589/146‑1 (MQ=255) tCGTGAGGATGAGTTGGCCAAACCGAAGACTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAAt < 1:1293992/150‑1 (MQ=255) tCGTGAGGATGAGTTGGCCAAACCGAAGACTCATGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAAt < 1:733413/150‑1 (MQ=255) cGTGAGGATGAGTTGGCCAAACCGAAGACTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATa < 2:1043798/150‑1 (MQ=255) aGGATGAGTTGGCCAAACCGAAGACTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATaaaaa < 1:332502/150‑1 (MQ=255) ggATGAGTTGGCCAAACCGAAGACTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAg > 1:763181/1‑150 (MQ=255) ggATGAGTTGGCCAAACCGAAGACTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAg > 1:1224560/1‑150 (MQ=255) aTGAGTTGGCCAAACCGAAGACTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGt < 2:711757/150‑1 (MQ=255) gTTGGCCAAACCGAAGACTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGttatt < 2:40963/150‑1 (MQ=255) ggCCAAACCGAAGACTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAg < 2:209764/150‑1 (MQ=255) ggCCAAACCGAAGACTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAg > 1:211357/1‑150 (MQ=255) ggCCAAACCGAAGACTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAg > 2:485580/1‑150 (MQ=255) gCCAAACCGAAGACTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAgg > 2:241560/1‑150 (MQ=255) cAAACCGAAGACTCCTGAAAGGTTAGATGAATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGAt < 2:728441/150‑1 (MQ=255) aaaCCGAAGACTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGAtt < 2:1047561/150‑1 (MQ=255) cGAAGACTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACa < 1:245187/150‑1 (MQ=255) aGACTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATg < 2:184160/150‑1 (MQ=255) aGACTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATg < 2:929994/150‑1 (MQ=255) aCTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAAc > 2:1390652/1‑144 (MQ=255) aCTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAAc < 1:1390652/144‑1 (MQ=255) cTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATgaag < 2:697494/150‑1 (MQ=255) ccTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATgaagaa > 1:965941/1‑150 (MQ=255) ccTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATgaagaa > 1:1432120/1‑150 (MQ=255) cTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGaaa > 1:518647/1‑150 (MQ=255) aaaGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACgt > 2:1170069/1‑150 (MQ=255) aaGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACgtg < 1:241560/150‑1 (MQ=255) ggTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGtt < 2:970392/150‑1 (MQ=255) ggTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTCCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGtt < 2:499478/150‑1 (MQ=255) gTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGttt < 2:948710/150‑1 (MQ=255) gTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGttt > 1:1005462/1‑150 (MQ=255) ttAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTTACAATGAAGAAACGTGTTTa < 2:871549/150‑1 (MQ=255) ttAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTa < 2:487513/150‑1 (MQ=255) tAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGttt > 1:1053752/1‑148 (MQ=255) tAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGttt < 2:1053752/148‑1 (MQ=255) gATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCt < 2:756814/150‑1 (MQ=255) gTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTAt < 2:498500/150‑1 (MQ=255) gTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTAt < 2:965941/150‑1 (MQ=255) aTTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTg > 1:170577/1‑150 (MQ=255) gAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTgccg > 2:734947/1‑150 (MQ=255) gAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTgccg < 2:1247456/150‑1 (MQ=255) aGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTgccgc > 1:1289900/1‑150 (MQ=255) gCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTgccgcc > 2:211863/1‑150 (MQ=255) ttAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAAAGACCC‑CCACCGAACCCGGGGCAAAGGAATAAAAGGGTATTTAAGGATT‑ACAATTAAGCAACCGGTTTATGATTTTTCCGCCCTagt > 2:76821/1‑150 (MQ=255) tAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTagt < 2:1308127/150‑1 (MQ=255) aaaTATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTagtg > 1:1190476/1‑150 (MQ=255) atatTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTagtgag > 1:1168171/1‑150 (MQ=255) atatTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTagtgag < 2:211357/150‑1 (MQ=255) tatTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTagtgagt > 2:1202895/1‑150 (MQ=255) atTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCtt < 2:1335500/131‑1 (MQ=255) atTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCtt > 1:1335500/1‑131 (MQ=255) atTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTagtgagtg > 1:978357/1‑150 (MQ=255) cAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATAAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTg < 2:170577/150‑1 (MQ=255) aaTTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGc < 2:366417/150‑1 (MQ=255) aaTTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGc < 1:924771/150‑1 (MQ=255) tttCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCgg < 2:985026/150‑1 (MQ=255) ttCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCGGt > 2:777367/1‑150 (MQ=255) cGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCGGTATc < 2:1024358/150‑1 (MQ=255) ttCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTg > 1:1185287/1‑150 (MQ=255) ttCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTg > 2:1307552/1‑150 (MQ=255) cccAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGca < 2:566051/150‑1 (MQ=255) cAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGATACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGcaga < 2:1234929/150‑3 (MQ=255) cAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGcaca > 2:716278/1‑150 (MQ=255) ggAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAAc < 2:921072/150‑1 (MQ=255) atCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAAccc < 1:1202895/150‑1 (MQ=255) tCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTTGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGTCGCTCTGGCGGTATCTGGCTGCACAACTAAcccg < 2:1224560/150‑2 (MQ=255) tCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCt < 2:1392609/150‑1 (MQ=255) tCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCt < 2:647059/150‑1 (MQ=255) tGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTgccg < 2:1389121/97‑1 (MQ=255) tGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTgccg > 1:1389121/1‑97 (MQ=255) gTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCg > 2:191447/1‑150 (MQ=255) tCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGc > 2:47708/1‑150 (MQ=255) gcgGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAAc < 2:978357/150‑1 (MQ=255) cATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGa < 2:391245/150‑1 (MQ=255) cATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAACGTTATTAAGGATTAACAATCAAGAAACGGGTTTATCTTAATGCCGCCGTAGTGAGTGGCTCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGa < 2:1073205/150‑1 (MQ=255) tAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAg < 1:734947/150‑1 (MQ=255) aaTCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGc < 1:777367/150‑1 (MQ=255) aaTCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGc < 2:1185287/150‑1 (MQ=255) aaTCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGc > 2:665876/1‑150 (MQ=255) ttctttgCCACGGGTTCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAg > 1:574184/7‑150 (MQ=255) ctcCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAgg > 1:1099488/1‑150 (MQ=255) tcCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGt < 2:1432120/150‑1 (MQ=255) cccGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTa > 1:280615/1‑150 (MQ=255) cccGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTa < 2:110946/150‑1 (MQ=255) ttgCCACGGGTTCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTaa > 2:53113/3‑150 (MQ=255) cGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGc < 1:893629/150‑1 (MQ=255) cGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGc < 1:1170069/150‑1 (MQ=255) | TCAGAACGGAATATCGTGAGGATGAGTTGGCCAAACCGAAGACTCCTGAAAGGTTAGATGTATTGAGCAGTTAAATATTACTTACAAATTTCCGAGTATTCCCAGGAATAATCTTCATGTTCACGCGGCATAATCTCCCGCCACGGAACCCGTGGCAAA‑GAATAAAAAGGTTATTAAGGATTAACAATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGC > NC_000913/3716361‑3716653 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |