Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_000913 | 4,106,371 | C→A | 7.3% | noncoding (42/58 nt) | cpxQ → | small regulatory RNA CpxQ |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 4,106,371 | 0 | C | A | 7.3% | 549.3 / 21.2 | 164 | noncoding (42/58 nt) | cpxQ | small regulatory RNA CpxQ |
Reads supporting (aligned to +/- strand): ref base C (85/67); new base A (7/5); total (92/72) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.69e-01 |
Only 100 of 166 total aligned reads displayed.
AAACATCAACAACGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGGCGGCGATTGCTGC > NC_000913/4106222‑4106515 | aaaCATCAACAACGAATGGAGCAGTTGCGGGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGc < 2:158417/150‑1 (MQ=255) aacaacGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTgggg > 1:49603/1‑150 (MQ=255) aacaacGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTgggg > 2:255273/1‑150 (MQ=255) acaacGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTggggg > 1:845354/1‑150 (MQ=255) acaacGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACAGCATGTggggg < 2:317991/150‑1 (MQ=255) caacGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGt < 1:526588/150‑1 (MQ=255) caacGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGt > 2:520741/1‑150 (MQ=255) cGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGtttt > 2:182897/1‑150 (MQ=255) gAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACAGCATGTgggggaaga < 2:1256597/149‑5 (MQ=255) gAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACAGCATGTgggggaaga > 1:1256597/1‑145 (MQ=255) aaTGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGtttttt < 2:860040/150‑1 (MQ=255) tGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGtttttttt > 1:1590/1‑150 (MQ=255) ggAGCAGTTTCGTGACTTTACGCAATTGCAAAAAAGTTCATCGTTGAATCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAATCCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCTCCACATGCTGTGGGGGTTTTTTTTa < 1:923493/150‑1 (MQ=255) gAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTAt < 1:244187/150‑1 (MQ=255) gAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTAt < 1:833248/150‑1 (MQ=255) tgccattGCGTCACGTCACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATc > 1:616467/6‑150 (MQ=255) aGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATc > 1:1345549/1‑150 (MQ=255) aGCAGTTGCGGGACGTGACGCAATGGCAAAAAAGGTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATc < 2:961572/150‑1 (MQ=255) gCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATcc > 1:838214/1‑150 (MQ=255) ccAGTTGCGTGACGTGACGCAATGGCAAAAACGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATCGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATcc < 2:1320443/149‑1 (MQ=255) cAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCt < 1:421680/150‑1 (MQ=255) aGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTc < 2:4420/150‑1 (MQ=255) tGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAAt < 2:1142161/150‑1 (MQ=255) gtgacgtgacGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTg > 2:12663/1‑150 (MQ=255) tgccgtgacgCAATGGCAAAAAAGTTCATCGGTGAAGCTATTGAGTAGTACCAACTAACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACCCC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTGTTTTTTAACCTCAATTTGc > 2:1290911/4‑150 (MQ=255) cAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCATCTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTAAAACACATGCTGTGGGGGTTTTTTTTATACTCAATTTGCCTGCTGCTTa > 1:1185442/1‑150 (MQ=255) ggCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGc > 1:1389836/1‑150 (MQ=255) ggCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTAAATTTCCCTGATGCTTAATga > 1:1014286/1‑149 (MQ=255) gCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCa > 2:644687/1‑150 (MQ=255) cAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCAt < 1:182897/150‑1 (MQ=255) aaaaaaGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCAtt > 1:1085960/1‑150 (MQ=255) aaaaaGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTg > 1:1347062/1‑150 (MQ=255) gTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAgat > 2:710224/1‑150 (MQ=255) gTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAgat > 2:197230/1‑150 (MQ=255) ttCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAgatg < 2:1374761/150‑1 (MQ=255) ttCATCGTGGAAGCTATTGAGTAGTAGCAACTCACGGTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAgatg < 2:1092396/150‑1 (MQ=255) cATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAgatgat < 2:43219/150‑1 (MQ=255) cATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAgatgat > 1:210044/1‑150 (MQ=255) cATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAgatgat > 2:798055/1‑150 (MQ=255) aTCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGAtt > 1:643490/1‑150 (MQ=255) aTCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGAtt < 1:130509/150‑1 (MQ=255) aTCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAAACCTGTTTTCCTTGCCATAGAAACC‑ATCCCTGTCTTCCACCACATGCTGTGGGGGTTTATTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGAtt > 1:907955/1‑150 (MQ=255) ttGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATAATAAATTTGCATGAAGATTAATGAATTGAATATGAtttcat > 2:1089797/1‑147 (MQ=255) aaGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTcc > 2:569376/1‑150 (MQ=255) gCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGt < 2:979285/150‑1 (MQ=255) cTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGtt > 2:1015772/1‑150 (MQ=255) tATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTta > 1:558405/1‑150 (MQ=255) tATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTta > 1:428247/1‑150 (MQ=255) tATTGAGTAGAAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTta < 2:1382659/150‑1 (MQ=255) gAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTCTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACt > 1:102928/1‑150 (MQ=255) agtagtAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGGGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTa > 2:1304491/1‑150 (MQ=255) gtagCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGt > 2:574368/1‑150 (MQ=255) agCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCa < 2:558405/150‑1 (MQ=255) gCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCat > 1:986707/1‑149 (MQ=255) gCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAg > 1:532468/1‑150 (MQ=255) aaCTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGGCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGtt < 2:1248135/150‑1 (MQ=255) aCTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTg < 2:1149047/150‑1 (MQ=255) tCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCggg < 2:838214/150‑1 (MQ=255) cccAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGa > 2:1320877/1‑150 (MQ=255) ccAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTACGTTATACTAGCGTCAGTTGATAGCGGGAg > 2:912554/1‑150 (MQ=255) cAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGt > 2:206178/1‑150 (MQ=255) gtagtaAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTAt < 2:1335989/150‑1 (MQ=255) agtaAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTAttt > 1:864489/1‑150 (MQ=255) gtaAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTa < 2:660729/150‑1 (MQ=255) aaaCCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATg < 1:57765/150‑1 (MQ=255) aaCCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGa < 1:644687/150‑1 (MQ=255) cccTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGaat < 2:845354/150‑1 (MQ=255) cccTGTTTTACTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGaat > 1:730103/1‑150 (MQ=255) ccTGTTTTCCTTGCCATATACACC‑ATCCCTGTCTTCCCCCACATGCTTTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGAATTTCAGATGATTTGCTTCCGTTATACTAGAGTCATTTGATAGCGGGAGTATTTATGaatc < 2:1185442/150‑1 (MQ=255) ccTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGaatc < 1:1110968/150‑1 (MQ=255) tGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGaatcaa < 1:12663/150‑1 (MQ=255) gTTTTCCTTGCCATATTCACCAATCCCTG‑CTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGaatcaat < 1:1089797/150‑1 (MQ=255) gTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGAt > 1:1326487/1‑127 (MQ=255) tttCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCt < 1:667645/150‑1 (MQ=255) ttCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCtt > 1:401406/1‑150 (MQ=255) tCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTa < 1:1015772/150‑1 (MQ=255) tCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTa > 1:1411028/1‑150 (MQ=255) tCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGATTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGATGATAGCTGGAGTATTTACGAATCAATCTTa > 2:905443/1‑150 (MQ=255) cTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATg > 2:733858/1‑150 (MQ=255) gCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGAc < 2:656377/150‑1 (MQ=255) aTAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGc < 2:986707/150‑1 (MQ=255) cacC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTc > 2:1330148/1‑150 (MQ=255) cacC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTc > 2:947653/1‑150 (MQ=255) cc‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAg < 1:703272/150‑1 (MQ=255) cc‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAg > 1:269497/1‑150 (MQ=255) c‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGt > 1:169866/1‑150 (MQ=255) cccTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCgg > 2:621245/1‑150 (MQ=255) tGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGggcg > 2:357560/1‑150 (MQ=255) tGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGggcg < 2:1347062/150‑1 (MQ=255) tGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGggcg < 2:616467/150‑1 (MQ=255) tGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGggcg < 2:628996/150‑1 (MQ=255) aacccccACAGCATGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGGCGGCGa > 2:236816/3‑150 (MQ=255) aacccccACAGCATGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGGCGGCGa > 2:1078754/3‑150 (MQ=255) cccccACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGGCGGCGAtt > 1:30423/1‑150 (MQ=255) cccACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGGCGGCGATtgc < 1:798055/150‑1 (MQ=255) cccACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGGCGGCGATtgc > 1:1034621/1‑150 (MQ=255) ccACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGt > 1:573906/1‑135 (MQ=255) ccACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGGCGGCGATtgct < 1:255273/150‑1 (MQ=255) cacaTGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGGCGGCGATtgctg < 2:1290971/150‑1 (MQ=255) acaTGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGGCGGCGATtgctgc < 1:1318012/150‑1 (MQ=255) | AAACATCAACAACGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACC‑ATCCCTGTCTTCCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGGCGGCGATTGCTGC > NC_000913/4106222‑4106515 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |