| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,038,858 | G→C | 5.0% | P296A (CCG→GCG) | xerD ← | site‑specific recombinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,038,858 | 0 | G | C | 5.0% | 272.6 / 4.3 | 80 | P296A (CCG→GCG) | xerD | site‑specific recombinase |
| Reads supporting (aligned to +/- strand): ref base G (39/37); new base C (2/2); total (41/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.22e-01 | |||||||||||
CGCTGCTTTTGATGCCCATTTTGGCTAACGTTTGTTGAATTGCCGCGTCATCAGCCTGAGCAAAGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTG > NC_000913/3038711‑3039002 | cGCTGCTTTTGATGCCCATTTTGGCTAACGTTTGTTGAATTGCCGCGTCATCAGCCTGAGCAAAGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGt > 2:585072/1‑150 (MQ=255) gctTTTGATGCCCATTTTGGCTAACGTTTGTTGAATTGCCGCGTCATCAGCCTGAGCAAAGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATg > 1:1427520/1‑150 (MQ=255) gctTTTGATGCCCATTTTGGCTAACGTTTGTTGAATTGCCGCGTCATCAGCCTGAGCAAAGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATg < 1:1414640/150‑1 (MQ=255) gctTTTGATGCCCATTTTGGCTAACGTTTGTTGAATTGCCGCGTCATCAGCCTGAGCAAAGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATg < 2:113884/150‑1 (MQ=255) ctTTTGATGCCCATTTTGGCTAACGTTTGTTGAATTGCCGCGTCATCAGCCTGAGCAAAGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGc > 1:897231/1‑150 (MQ=255) ctTTTGATGCCCATTTTGGCTAACGTTTGTTGAATTGCCGCGTCATCAGCCTGAGCAAAGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGc > 2:230670/1‑150 (MQ=255) tttGATGCCCATTTTGGCTAACGTTTGTTGAATTGCCGCGTCATCAGCCTGAGCAAAGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACCCGCGGGCGTGATgtct < 2:277632/150‑4 (MQ=255) aTGCCCATTTTGGCTAACGTTTGTTGAATTGCCGCGTCATCAGCCTGAGCAAAGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACCCGCGGGCGTGATgtctgaaa < 1:1337717/150‑8 (MQ=255) tGCCCATTTTGGCTAACGTTTGTTGAATTGCCGCGTCATCAGCCTGAGCAAAGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTtgat < 2:27149/150‑1 (MQ=255) gCCCATTTTGGCTAACGTTTGTTGAATTGCCGCGTCATCAGCCTGAGCAAAGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTtgatg > 2:1373427/1‑150 (MQ=255) cccATTTTGGCTAACGTTTGTTGAATTGCCGCGTCATCAGCCTGAGCAAAGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTtgatga < 1:1353728/150‑1 (MQ=255) cccATTTTGGCTAACGTTTGTTGAATTGCCGCGTCATCAGCCTGAGCAAAGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTtgatga > 2:1207568/1‑150 (MQ=255) cATTTTGGCTAACGTTTGTTGAATTGCCTCGTCATCAGCCTGAGCAAAGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAg > 2:1030151/1‑150 (MQ=255) aTTTTGGCTAACGTTTGTTGAATTGCCGCGTCATCAGCCTGAGCAAAGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGt < 1:1430486/150‑1 (MQ=255) tGGCTAACGTTTGTTGAATTGCCGCGTCATCAGCCTGAGCAAAGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGcc < 1:883718/150‑1 (MQ=255) tGGCTAACGTTTGTTGAATTGCCGCGTCATCAGCCTGAGCAAAGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGcc < 1:1207568/150‑1 (MQ=255) gCTAACGTTTGTTGAATTGCCGCGTCATCAGCCTGAGCAAAGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCggg > 1:963340/1‑126 (MQ=255) gCTAACGTTTGTTGAATTGCCGCGTCATCAGCCTGAGCAAAGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCggg < 2:963340/126‑1 (MQ=255) aCGTTTGTTGAATTGCCGCGGCATCAGCCTGAGCAAAGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGAc < 2:942613/150‑1 (MQ=255) tgAATTGCCGCGTCATCAGCCTGAGCAAAGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTa > 1:1400053/1‑150 (MQ=255) aaTTGCCGCGTCATCAGCCTGAGCAAAGCCTGAAAACGCCGCTATCAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGTTGAAGTTGCCGCAGACGCTCGGTAGc < 1:934346/150‑1 (MQ=255) aTTGCCGCGTCATCAGCCTGAGCAAAGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCg < 1:133597/150‑1 (MQ=255) aTTGCCGCGTCATCAGCCTGAGCAAAGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCg > 1:870528/1‑150 (MQ=255) aTTGCCGCGTCATCAGCCTGAGCAAAGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCg > 2:1317251/1‑150 (MQ=255) cgTCATCAGCCTGAGCAAAGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCg < 2:505204/150‑1 (MQ=255) cgTCATCAGCCTGAGCAAAGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCg < 1:37033/150‑1 (MQ=255) atcaGCCTGAGCAAAGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGtata > 1:1376255/1‑150 (MQ=255) gCCTGAGCAAAGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAAtt > 1:135213/1‑150 (MQ=255) ccTGAGCAAAGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAAttt > 2:8881/1‑150 (MQ=255) cTGAGCAAAGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAg > 1:1114703/1‑120 (MQ=255) cTGAGCAAAGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAg < 2:1114703/120‑1 (MQ=255) tGAGCAAAGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGc < 1:641403/150‑1 (MQ=255) gCAAAGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCgtg < 2:1400053/150‑1 (MQ=255) aggcTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGtggtgg < 1:611769/147‑1 (MQ=255) aGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGTTGATTATGTTTATGAAGTTGCCGCATAATCTCGTTTGTTAAATGCGTATAAATTTGAgttgtgt < 2:516334/150‑2 (MQ=255) aGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGtggtgg > 2:1055040/1‑150 (MQ=255) cTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGgaga > 2:1099004/1‑150 (MQ=255) cTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCAGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGgaga > 1:529677/1‑150 (MQ=255) tGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGgagag > 2:303974/1‑150 (MQ=255) tGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCCTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGgagag > 2:723731/1‑150 (MQ=255) gAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGgagaga > 2:107945/1‑150 (MQ=255) gAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGgagaga > 1:1325127/1‑150 (MQ=255) aCGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGc < 1:104205/150‑1 (MQ=255) aCGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGc < 1:1373427/150‑1 (MQ=255) cgccgcTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCt > 1:96802/1‑150 (MQ=255) cgcTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCtgtg < 1:8881/150‑1 (MQ=255) gcTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTgg < 1:342133/150‑1 (MQ=255) cTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGc < 1:200735/150‑1 (MQ=255) cTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGc > 2:696921/1‑150 (MQ=255) aaCAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGccc > 1:1276819/1‑150 (MQ=255) aaCAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGccc < 1:585072/150‑1 (MQ=255) cAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAg < 2:1048753/150‑1 (MQ=255) aaaGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGt > 1:419145/1‑150 (MQ=255) gTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGc > 2:828294/1‑150 (MQ=255) acaacaTAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCt < 1:1317251/150‑1 (MQ=255) acaTAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGca < 1:362582/150‑1 (MQ=255) aTAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGcacc > 2:1165407/1‑150 (MQ=255) tAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGccc > 1:641092/1‑134 (MQ=255) tAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGccc < 2:641092/134‑1 (MQ=255) aaaCCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCAcg > 2:1205327/1‑150 (MQ=255) aCCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCAcgcg < 2:96802/150‑1 (MQ=255) ttcATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATcc > 1:416820/1‑150 (MQ=255) cATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGc < 1:107945/150‑1 (MQ=255) tAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCAc > 1:346058/1‑150 (MQ=255) cTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGa > 1:858567/1‑150 (MQ=255) cTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGa < 2:419145/150‑1 (MQ=255) ttCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGAt < 1:255860/150‑1 (MQ=255) cccGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGAttt < 1:1099004/150‑1 (MQ=255) cGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTtaa < 1:1205327/150‑1 (MQ=255) cTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATaaa > 1:1197885/1‑150 (MQ=255) tCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAg < 2:960794/150‑1 (MQ=255) acagcATCACCCGCGGGCGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGt > 1:1349590/5‑150 (MQ=255) agcATCACCCGCGGGCGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTgg > 2:502575/3‑150 (MQ=255) aTCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCaa > 2:1088958/1‑150 (MQ=255) aTCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACACTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCaa > 1:415147/1‑150 (MQ=255) cACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGc < 1:1165454/85‑1 (MQ=255) cACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGc > 2:1165454/1‑85 (MQ=255) aCGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGTACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAg < 1:230670/150‑1 (MQ=255) aCGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAg > 2:81483/1‑150 (MQ=255) gCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCg > 1:1068361/1‑150 (MQ=255) cccGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGt > 1:867445/1‑150 (MQ=255) ccGCGGGTTATGCTGTTGATGTATTTGCCGCAGATTCTCGGTAGCGACATGCGTATAAATTTGAGTTTTGGAGAGATCGCTGTGTCCCAGTATCATCTTCACCACGCGTAAATCCGCACGATTATTTATTAAATTAGTGGCAAATGCGTg < 2:513842/150‑1 (MQ=255) | CGCTGCTTTTGATGCCCATTTTGGCTAACGTTTGTTGAATTGCCGCGTCATCAGCCTGAGCAAAGCCTGAAAACGCCGCTAACAAAGTAAACAACATAAAACCTTTCTTCATAAATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTG > NC_000913/3038711‑3039002 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |