| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,210,447:1 | +G | 5.3% | coding (97/1014 nt) | tsaD ← | N(6)‑L‑threonylcarbamoyladenine synthase, TsaD subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,210,447 | 1 | . | G | 5.3% | 398.4 / 15.5 | 95 | coding (97/1014 nt) | tsaD | N(6)‑L‑threonylcarbamoyladenine synthase, TsaD subunit |
| Reads supporting (aligned to +/- strand): ref base . (42/48); new base G (3/2); total (45/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.65e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CTGCGGTATAGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCTTTATTACCGCGCAGTGTAGGACCAATGCGGGTTGA > NC_000913/3210303‑3210596 | cTGCGGTATAGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGAc < 1:904081/150‑1 (MQ=255) tGCGGTATAGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACt < 1:1114035/150‑1 (MQ=255) tGCGGTATAGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACt < 1:525477/150‑1 (MQ=255) tGCGGTATAGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAG‑GTGAAATTGCACGCTGACt < 2:401166/150‑1 (MQ=255) cGGTATAGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACtat > 1:187260/1‑150 (MQ=255) ggTATAGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAc < 2:490523/141‑1 (MQ=255) ggTATAGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAc > 1:490523/1‑141 (MQ=255) tataGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACa > 1:1330004/1‑150 (MQ=255) ataGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAG‑GTGAAATTGCACGCTGACtacggcg < 2:1276480/150‑6 (MQ=255) gCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAAttgg > 2:105542/1‑150 (MQ=255) gCATCAATGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCt < 2:916347/150‑1 (MQ=255) gCATCAATGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCt > 1:916347/1‑150 (MQ=255) cATCAATGTCTTTTGGCGTTAAACCAGACTACTTTAGCGCCGCCTGGATCAACGGTAGTGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTATTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTa < 2:1364076/150‑1 (MQ=255) tCAATGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAAc < 1:237406/150‑1 (MQ=255) cAATGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACa < 2:60357/150‑1 (MQ=255) cAATGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACa > 1:177566/1‑150 (MQ=255) aTGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACaaa > 2:732701/1‑150 (MQ=255) aTGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACaaa < 1:333876/150‑1 (MQ=255) tGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAAc < 1:183820/150‑1 (MQ=255) cTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGCGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCtt > 2:1536076/1‑150 (MQ=255) ttttGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCttt > 1:273802/1‑150 (MQ=255) ccGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCAt < 2:763899/150‑1 (MQ=255) cGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCAtc > 2:353227/1‑150 (MQ=255) aaaCCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCAtcgtcg > 2:1393246/1‑150 (MQ=255) aaaCCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCAtcgtcg < 1:1393246/150‑1 (MQ=255) aaaCCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCAtcgtcg < 2:694376/150‑1 (MQ=255) aaaCCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCAtcgtcg > 1:1126944/1‑150 (MQ=255) aaCCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATcgtcgt > 1:1014854/1‑150 (MQ=255) aCCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTa < 2:886699/150‑1 (MQ=255) ccAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTaa > 1:894459/1‑150 (MQ=255) aGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAAt < 1:353227/150‑1 (MQ=255) aCTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATgg < 2:444707/150‑1 (MQ=255) cTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGc < 2:169300/150‑1 (MQ=255) cTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGc < 1:1050030/150‑1 (MQ=255) ccTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGa < 2:1014854/150‑1 (MQ=255) ccTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGa > 1:960309/1‑150 (MQ=255) cTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGAt < 2:564341/150‑1 (MQ=255) cTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGAt > 1:1200017/1‑150 (MQ=255) cTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGACCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGAt > 2:393276/1‑150 (MQ=255) cgccgcCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTCACTATACAATTGGTTGGCTAACAACCGTTTTTCATCGTCGTAAATGGCGATGCCGGt > 1:975359/1‑150 (MQ=255) ccgccTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGttt < 2:1516183/150‑1 (MQ=255) tGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCg < 1:98234/150‑1 (MQ=255) ggATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATgg > 2:470101/1‑132 (MQ=255) ggATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATgg < 1:470101/132‑1 (MQ=255) aTCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAg < 2:1505221/150‑1 (MQ=255) aTCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAg > 1:1333491/1‑150 (MQ=255) aTCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAg < 1:20250/150‑1 (MQ=255) cAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGa > 1:43459/1‑150 (MQ=255) cAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGa > 1:1083491/1‑150 (MQ=255) acggtacggtTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAg > 2:976480/1‑150 (MQ=255) gtacggtTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATg < 1:618986/122‑1 (MQ=255) gtacggtTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATg > 2:618986/1‑122 (MQ=255) ggtTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAAt < 2:1126944/150‑1 (MQ=255) tttACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATAcc < 2:187904/150‑1 (MQ=255) ttACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATAccc < 2:380632/150‑1 (MQ=255) ttACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATAccc < 2:374987/150‑1 (MQ=255) aCGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAg < 2:894459/150‑1 (MQ=255) cGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGt > 2:1397057/1‑150 (MQ=255) cGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGt > 2:1411053/1‑150 (MQ=255) cacaTGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCTCAGGAAGTTTCAATACCCAGTac < 2:930866/150‑1 (MQ=255) cacaTGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTac > 1:633553/1‑150 (MQ=255) acaTGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTaca > 1:375756/1‑150 (MQ=255) gATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCa < 2:1200017/150‑1 (MQ=255) gATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTACAC‑CTGACTATACAATTGGTTGGCTAACACACCTTTTTCAGCGTCGTAAATGGCGATGCCGGTGTCATCGCAGGAAGGTTCAATACCCAGTACACGCa > 1:1434957/1‑150 (MQ=255) tCGCGGGTGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATg < 2:74797/150‑1 (MQ=255) cgcgGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGa > 2:226947/1‑150 (MQ=255) gcgGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGAc < 1:1195585/150‑1 (MQ=255) aGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGtt < 1:307807/150‑1 (MQ=255) ggCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGttt > 1:130127/1‑150 (MQ=255) ggCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGttt > 1:1233723/1‑150 (MQ=255) gCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGtttt < 2:1333491/150‑1 (MQ=255) gCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGtttt < 2:273802/150‑1 (MQ=255) cAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTAc > 1:428755/1‑150 (MQ=255) aGTTCATGGACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTAcc < 1:1327807/150‑1 (MQ=255) gCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCttt < 2:735979/150‑1 (MQ=255) cACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCTtta < 2:237470/150‑1 (MQ=255) cACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCTtta > 2:1248526/1‑150 (MQ=255) cgacgCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCTttatt > 2:102181/1‑150 (MQ=255) cgacgCCGCCGTAGTCAGCGTGCAATTTCAA‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCTttatt > 2:237502/1‑150 (MQ=255) gacgCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCTttatta < 1:649876/150‑1 (MQ=255) aattgtatAGTCAG‑GTGAAATTGCACGCTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCTTTATTACcg > 1:189311/8‑150 (MQ=255) attgtatAGTCAG‑GTGAAATTGCACGCTGCCTATACAATTGGTTGGCTAACACCCCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCTCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCTTTATTACcgc > 1:1520255/7‑150 (MQ=255) cgccgTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGNCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCTTTATTACcgcg < 1:1233957/150‑1 (MQ=255) gccgTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACATCGCTTTATTACCgcgc > 1:339268/1‑150 (MQ=255) atAGTCAG‑GTGAAATTGCACGCTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTAGCTTTATTACCGCGCAgt > 1:647400/2‑150 (MQ=255) tAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCTTTATTACCGCGCAgtg < 1:1411053/150‑1 (MQ=255) gTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCttt < 2:614710/134‑1 (MQ=255) gTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCttt > 1:614710/1‑134 (MQ=255) gTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCTTTATTACCGCGCAGTGTa < 1:229053/150‑1 (MQ=255) gTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCTTTATTACCGCGCAGTGTa < 1:768722/150‑1 (MQ=255) cAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCTTTATTACCGCGCAGTGTAgg > 2:758780/1‑150 (MQ=255) cGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCTTTATTACCGCGCAGTGTAGGAcc < 1:324284/150‑1 (MQ=255) tGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCTTTATTACCGCGCAGTGTa > 2:893355/1‑143 (MQ=255) tGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCTTTATTACCGCGCAGTGTa < 1:893355/143‑1 (MQ=255) tGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCTTTATTACCGCGCAGTGTAGGACCaa > 2:641227/1‑150 (MQ=255) tCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATAGTCGTAAATGGCGATCCCGCTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCAAGACTTGTTTTACCTCGCTTTATTACCGAGCAGTGTAGGACCAATGAGGGt > 1:1003021/1‑150 (MQ=255) cAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCTTTATTACCGCGCAGTGTAGGACCAATGCGGGtt > 2:459004/1‑150 (MQ=255) c‑cTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCTTTATTACCGCGCAGTGTAGGACCAATGCGGGTTGa > 1:593036/1‑150 (MQ=255) c‑cTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATAGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCTTTATTACCGCGCAGTGTAGGACAAATGCGGGTTGa > 2:647815/1‑150 (MQ=255) | CTGCGGTATAGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACTCCTTTAGCGCCGCCTGGATCAACGGTACGGTTTTACGCACATGATCGCGGGAGGCCAGTTCAGGCACGACGCCGCCGTAGTCAGCGTGCAATTTCAC‑CTGACTATACAATTGGTTGGCTAACAAACCTTTTTCATCGTCGTAAATGGCGATGCCGGTTTCATCGCAGGAAGTTTCAATACCCAGTACACGCATGACTTGTTTTACCTCGCTTTATTACCGCGCAGTGTAGGACCAATGCGGGTTGA > NC_000913/3210303‑3210596 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |