| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1826239 | 81 (0.930) | 4 (0.050) | 4/260 | NT | 5.3% | coding (685/969 nt) | astE | succinylglutamate desuccinylase |
| ? | NC_000913 | = 1826306 | 67 (0.810) | coding (618/969 nt) | astE | succinylglutamate desuccinylase | |||||
CTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1826083‑1826239‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgctggcCTGTACGCTGGAACTTGGCAAAGCGTTGCCCTTTGGGCAAAACGATCTTCGCCAGTTTGCAGTAACTGCCAGCGCAATTGCTGCGCTGCTATCTGGTGAGAGTGTCGGTATCGTGAGAACACCGCCGCTCCGTTATCGGGTGGTTTC < NC_000913/1826306‑1826160 CTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTG > 1:79322/1‑150 TCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGC < 1:1357968/150‑1 CTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCT > 1:770687/1‑150 TCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGAAACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTG > 1:466444/1‑150 AAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGC > 1:164892/1‑150 CATTTCTAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCCTGTACGCTGGAACTTGGCAAAGCGTTGCCCTTTGG > 2:48965/1‑150 CACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCCTGTACGCTGGAACTTGGCAAAGCGTTGCCCTTTGGGCAAAACGATCTTCGCCAGTTTGCAGTAACTGCCAGCGC < 1:1213524/150‑1 CCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCCTGTACGCTGGAACTTGGCAAAGCGTTGCCCTTTGGGCAAAACGATCTTCGCCAGTTTGCAGTAACTGCCAGCGCAAT < 1:48965/150‑1 CGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCACATAGCAGCGCAGCAATTGCGCTGGCCTGTACGCTGGAACTTGGCAAAGCGTTGCCCTTTGGGCAAAACGATCTTCGCCAGTTTGCAGTAACTGCCAGCGCAATT < 1:587517/150‑1 GCTGGCCTGTACGCTGGAACTTGGCAAAGCGTTGCCCTTTGGGCAAAACGATCTTCGCCAGTTTGCAGTAACTGCCAGCGCAATTGCTGCGCTGCTATCTGGTGAGAGTGTCGGTATCGTGAGAACACCGCCGCTCCGTTATCGGGTGGT < 1:922438/150‑1 GGCCTGTACGCTGGAACTTGGCAAAGCGTTGCCCTTTGGGCAAAACGATCTTCGCCAGTTTGCAGTAACTGCCAGCGCAATTGCTGCGCTGCTATCTGGTGAGAGTGTCGGTATCGTGAGAACACCGCCGCTCCGTTATCGGGTGGTTTC > 1:1069331/1‑150 CTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1826083‑1826239‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgctggcCTGTACGCTGGAACTTGGCAAAGCGTTGCCCTTTGGGCAAAACGATCTTCGCCAGTTTGCAGTAACTGCCAGCGCAATTGCTGCGCTGCTATCTGGTGAGAGTGTCGGTATCGTGAGAACACCGCCGCTCCGTTATCGGGTGGTTTC < NC_000913/1826306‑1826160 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |