New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 3408552 | 71 (0.810) | 8 (0.090) | 5/272 | NT | 10.4% | coding (946/1452 nt) | panF | pantothenate:Na(+) symporter |
? | NC_000913 | = 3408596 | 68 (0.790) | coding (990/1452 nt) | panF | pantothenate:Na(+) symporter |
GCAAAGCCGTACATCGGGGGATCATCATCGGTACGATTGTGGTCGCAATTCTGATGTTCGGTATGCACCTGGCCGGAGCGTTAGGTCGGGCGGTGATCCCCGATCTCACCGTACCGGACCTGGTGATCCCAACGTTAATGGTAAAAGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3408403‑3408552 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcAGCCATCG‑GTGCAGCCAGGAAGATCCCGGCAGCAAACGGTGGCAGCACTTTTACCA < NC_000913/3408596‑3408541 GCAAAGCCGTACATCGGGGGATCATCATCGGTACGATTGTGGCCGCAATTCTGATGTTCGGTATGCACCTGGCCGGAGCGTTAGGTCGGGCGGTGATCCCCGATCTCACCGTACCGGACCTGGTGATCCCAACGTTAATGGTAAAAGTGC > 1:713964/1‑150 GTGGTCGCAATTCTGATGTTCGGTATGCACCTGGCCGGAGCGTTAGGTCGGGCGGTGATCCCCGATCTCACCGTACCGGACCTGGTGATCCCAACGTTAATGGTAAAAGTGCTGCCACCGTTTGCAGCCAGGAAGATCCCGGCAGCAAAC < 1:370584/150‑1 GTGGTCGCAATTCTGATGTTCGGTATGCACCTGGCCGGAGCGTTAGGTCGGGCGGTGATCCCCGATCTCACCGTACCGGACCTGGTGATCCCAACGTTAATGGTAAAAGTGCTGCCACCGTTTGCAGCCAGGAAGATCCCGGCAGCAAAC < 1:525426/150‑1 GTGGTCGCAATTCTGATGTTCGGTATGCACCTGGCCGGAGCGTTAGGGCGGGCGGTGATCCCCGATCTCACCGTACCGGACCGGGTGATCCCAACGTTAATGGTAAAAGTGCTGCCACCGTTTGCAGCCAGGAAGATCCCGGCAGCAAAC < 2:93298/150‑1 ATTCTGATGTTCGGTATGCACCTGGCCGGAGCGTTAGGTCGGGCGGTGATCCCCGATCTCACCGTACCGGACCTGGTGATCCCAACGTTAATGGTAAAAGTGCTGCCATCG‑GTGCAGCCAGGAAGATCCCGGCAGCAAACGGTGGCAGCA < 1:713637/150‑1 TTCTGATGTTCGGTATGCACCTGGCCGGAGCGTTAGGTCGGGCGGTGATCCCCGATCTCACCGTACCGGACCTGGTGATCCCAACGTTAATGGTAAAAGTGCAGCCATCG‑GTGCAGCCAGGAAGATCCCGGCAGCAAACGGTGGCAGCAC < 2:1227717/150‑1 CTGATGTTCGGTATGCACCTGGCCGGAGCGTTAGGTCGGGCGGTGATCCCCGATCTCACCGTACCGGACCTGGTGATCCCAACGTTAATGGTAAAAGTGCAGCCATCG‑GTGCAGCCAGGAAGATCCCGGCAGCAAACGGTGGCAGCACTT < 1:304538/150‑1 TTCGGTATGCACCTGGCCGGAGCGTTAGGTCGGGCGGTGATCCCCGATCTCACCGTACCGGACCTGGTGATCCCAACGTTAATGGTAAAAGTGCAGCCATCG‑GTGCAGCCAGGAAGATCCCGGCAGCAAACGGTGGCAGCACTTTTACCA < 1:800471/150‑1 TTCGGTATGCACCTGGCCGGAGCGTTAGGTCGGGCGGTGATCCCCGATCTCACCGTACCGGACCTGGTGATCCCAACGTTAATGGTAAAAGTGCAGCCATCG‑GTGCAGCCAGGAAGATCCCGGCAGCAAACGGTGGCAGCACTTTTACCA < 1:800472/150‑1 GCAAAGCCGTACATCGGGGGATCATCATCGGTACGATTGTGGTCGCAATTCTGATGTTCGGTATGCACCTGGCCGGAGCGTTAGGTCGGGCGGTGATCCCCGATCTCACCGTACCGGACCTGGTGATCCCAACGTTAATGGTAAAAGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3408403‑3408552 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcAGCCATCG‑GTGCAGCCAGGAAGATCCCGGCAGCAAACGGTGGCAGCACTTTTACCA < NC_000913/3408596‑3408541 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |