| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3442127 = | 103 (1.180) | 6 (0.070) | 4/258 | NT | 6.1% | coding (345/357 nt) | rpsM | 30S ribosomal subunit protein S13 |
| ? | NC_000913 | 3442212 = | 90 (1.100) | coding (260/357 nt) | rpsM | 30S ribosomal subunit protein S13 | |||||
TTGTCGTTGAAGGTGATCTGCGCCGTGAAATCAGCATGAGCATCAAGCGCCTGATGGATCTTGGTTGCTATCGCGGTTTGCGTCATCGTCGTGGTCTCCCGGTTCGCGGTCAGCGTACCAAGACCAACGCACGTACCCGTAAGGGTCCGCGCAAACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3442284‑3442127‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcaaaccgCGATAGCAACCAAGATCCATCAGGCGCTTGATGCTCATGCTGATTTCACGGCGCAGATCACCTTCAACGACAAATTTGGCAACTTCGTCACGCAGCGTGTCGATTTGTCCTTCAGACAGCTCACTGATCTTAACATCTTCAGCGATACC > NC_000913/3442212‑3442360 TTGTCGTTGAAGGTGATCTGCGCCGTGAAATCAGCATGAGCATCAAGCGCCTGATGGATCTTGGTTGCTATCGCGGTTTGCGTCATCGTCGTGGTCTCCCGGTTCGCGGTCAGCGTACCAAGACCAACGCACGTACCCGTAAGGGTCCGC < 2:592455/150‑1TTGTCGTTGAAGGTGATCTGCGCCGTGAAATCAGCATGAGCATCAAGCGCCTGATGGATCTTGGTTGCTATCGCGGTTTGCGTCATCGTCGTGGTCTCCCGGTTCGCGGTCAGCGTACCAAGACCAACGCACGTACCCGTAAGGGTCCGC < 2:388846/150‑1 GTCGTTGAAGGTGATCTGCGCCGTGAAATCAGCATGAGCATCAAGCGCCTGATGGATCTTGGTTGCTAGCGCGGTTTGCGTCATCGTCGTGGTCTCCCGGTTCGCGGTCAGCGTACCAAGACCAACGCACGTACCCGTAAGGGTCCGCGC < 2:1245515/150‑1 TCGTTGAAGGTGATCTGCGCCGTGAAATCAGCATGAGCATCAAGCGCCTGATGGATCTTGGTTGCTATCGCGGTTTGCGTCATCGTCGTGGTCTCCCGGTTCGCGGTCAGCGTACCAAGACCAACGCACGTACCCGTAAGGGTCCGCGCA < 1:977916/150‑1 CGTTGAAGGTGATCTGCGCCGTGAAATCAGCATGAGCATCAAGCGCCTGATGGATCTTGGTTGCTATCGCGGTTTGCGTCATCGTCGTGGTCTCCCGGTTCGCGGTCAGCGTACCAAGACCAACGCACGTACCCGTAAGGGTCCGCGCAA > 1:955961/1‑150 TGAAGGTGATCTGCGCCGTGAAATCAGCATGAGCATCAAGCGCCTGATGGATCTTGGTTGCTATCGCGGTTTGCGTCATCGTCGTGGTCTCCCGGTTCGCGGTCAGCGTACCAAGACCAACGCACGTACCCGTAAGGGTCCGCGCAAACC < 1:958198/150‑1 GAAGGTGATCTGCGCCGTGAAATCAGCATGAGCATCAAGCGCCTGATGGATCTTGGTTGCTATCGCGGTTTGCGTCATCGTCGTGGTCTCCCGGTTCGCGGTCAGCGTACCAAGACCAACGCACGTACCCGTAAGGGTCCGCGCAAACCG < 2:40995/150‑1 CTATCGCGGTTTGCGTCATCGTCGTGGTCTCCCGGTTCGCGGTCAGCGTACCAAGACCAACGCACGTACCCGTAAGGGTCCGCGCAAACCGCGATAGCAACCAAGCTCCATCAGGCGCTTGATGCTCATGCTGATTTCACGGCGCAGATC > 2:996485/1‑150 GCGGTTTGCGTCATCGTCGTGGTCTCCCGGTTCGCGGTCAGCGTACCAAGACCAACGCACGTACCCGTAAGGGTCCGCGCAAACCGCGATAGCAACCAAGATCCATCAGGCGCTTGATGCTCATGCTGATTTCACGGCGCAGATCACCTT > 1:833698/1‑150 GCGGTTTGCGTCATCGTCGTGGTCTCCCGGTTCGCGGTCAGCGTACCAAGACCAACGCACGTACCCGTAAGGGTCCGCGCAAACCGCGATAGCAACCAAGATCCATCAGGCGCTTGATGCTCATGCTGATTTCACGGCGCAGATCACCTT > 1:327442/1‑150 GCGGTTTGCGTCATCGTCGTGGTCTCCCGGTTCGCGGTCAGCGTACCAAGACCAACGCACGTACCCGTAAGGGTCCGCGCAAACCGCGATAGCAACCAAGATCCATCAGGCGCTTGATGCTCATGCTGATTTCACGGCGCAGATCACCTT < 2:833698/150‑1 GTCGTGGTCTCCCGGTTCGCGGTCAGCGTACCAAGACCAACGCACGTACCCGTAAGGGTCCGCGCAAACCGCGATAGCAACCAAGATCCATCAGGCGCTTGATGCTCATGCTGATTTCACGGCGCAGATCACCTTCAACGCCAAATTTGG > 1:123209/1‑150 GTCGTGGTCTCCCGGTTCGCGGTCAGCGTACCAAGACCAACGCACGTACCCGTAAGGGTCCGCGCAAACCGCGATAGCAACCAAGATCCATCAGGCGCTTGATGCTCATGCTGATTTCACGGCGCAGATCACCTTCAACGACAAATTTGG > 1:579559/1‑150 CGCAAACCGCGATAGCAACCAAGATCCATCAGGCGCTTGATGCTCATGCTGATTTCACGGCGCAGATCACCTTCAACGACAAATTTGGCAACTTCGTCACGCAGCGTGTCGATTTGTCCTTCAGACAGCTCACTGATCTTAACATCTTCA > 2:4043/1‑150 CAAACCGCGATAGCAACCAAGATCCATCAGGCGCTTGATGCTCATGCTGATTTCACGGCGCAGATCACCTTCAACGACAAATTTGGCAACTTCGTCACGCAGCGTGTCGATTTGTCCTTCAGACAGCTCACTGATCTTAACATCTTCAGC < 1:220439/150‑1 CAAACCGCGATAGCAACCAAGATCCATCAGGCGCTTGATGCTCATGCTGATTTCACGGCGCAGATCACCTTCAACGACAAATTTGGCAACTTCGTCACGCAGCGTGTCGATTTGTCCTTCAGACAGCTCACTGATCTTAACATCTTCAGC > 2:462656/1‑150 AACCGCGATAGCAACCAAGATCCATCAGGCGCTTGATGCTCATGCTGATTTCACGGCGCAGATCACCTTCAACGACAAATTTGGCAACTTCGTCACGCAGCGTGTCGATTTGTCCTTCAGACAGCTCACTGATCTTAACATCTTCAGCGA < 1:831678/150‑1 ACCGCGATAGCAACCAAGATCCATCAGGCGCTTGATGCTCATGCTGATTTCACGGCGCAGATCACCTTCAACGACAAATTTGGCAACTTCGTCACGCAGCGTGTCGATTTGTCCTTCAGACAGCTCACTGATCTTAACATCTTCAGCGAT > 1:907444/1‑150 ACCGCGATAGCAACCAAGATCCATCAGGCGCTTGATGCTCATGCTGATTTCACGGCGCAGATCACCTTCAACGACAAATTTGGCAACTTCGTCACGCAGCGTGTCGATTTGTCCTTCAGACAGCTCACTGATCTTAACATCTTCAGCGAT > 1:1450967/1‑150 CCGCGATAGCAACCAAGATCCATCAGGCGCTTGATGCTCATGCTGATTTCACGGCGCAGATCACCTTCAACGACAAATTTGGCAACTTCGTCACGCAGCGTGTCGATTTGTCCTTCAGACAGCTCACTGATCTTAACATCTTCAGCGATA > 1:815475/1‑150 GCGATAGCAACCAAGATCCATCAGGCGCTTGATGCTCATGCTGATTTCACGGCGCAGATCACCTTCAACGACAAATTTGGCAACTTCGTCACGCAGCGTGTCGATTTGTCCTTCAGACAGCTCACTGATCTTAACATCTTCAGCGATACC < 2:1358699/150‑1 TTGTCGTTGAAGGTGATCTGCGCCGTGAAATCAGCATGAGCATCAAGCGCCTGATGGATCTTGGTTGCTATCGCGGTTTGCGTCATCGTCGTGGTCTCCCGGTTCGCGGTCAGCGTACCAAGACCAACGCACGTACCCGTAAGGGTCCGCGCAAACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3442284‑3442127‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcaaaccgCGATAGCAACCAAGATCCATCAGGCGCTTGATGCTCATGCTGATTTCACGGCGCAGATCACCTTCAACGACAAATTTGGCAACTTCGTCACGCAGCGTGTCGATTTGTCCTTCAGACAGCTCACTGATCTTAACATCTTCAGCGATACC > NC_000913/3442212‑3442360 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |