New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3879520	65 (0.740)	7 (0.080)	6/264	NT	9.4%	coding (600/2415 nt)	gyrB	DNA gyrase subunit B
	?	NC_000913	= 3879550	72 (0.860)					coding (570/2415 nt)	gyrB	DNA gyrase subunit B

AATACCGTCTTTTTCAGTGGAGAAGTAGAAGATATTCGGGTGGATCGGCGTTTTGTTCTTGTTCAGATATTCAACGAACGCCTTGATGCCGCCTTCATAGTGGAAGTGGTCTTCTTTGCCGTCGCGCTTGTCGCGCAGACGAATGGAAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3879370‑3879520 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaaacgTCTGCGTGAGTTGTCGTTCCTCAACTCCGGCGTTTCCATTCGTCTGCGCGACAAGCGCGACGGCAAAGAAGACCACTTCCACTATGAAGGCGGCATCAAGGCGTTCGTTGAATATCTGAACAAGAACAAAACGCCGATCCACCCGAAT  <  NC_000913/3879550‑3879403                                                                                                                                                                                                                                                                                                             AATACCGTCTTTTTCAGTGGAGAAGTAGAAGATATTCGGGTGGATCGGCGTTTTGTTCTTGTTCAGATATTCAACGAACGCCTTGATGCCGCCTTCATAGTGGAAGTGGTCTTCTTTGCCGTCGCGCTTGTCGCGCAGACGAATGGAAAC                                                                                                                                                       <  1:776188/150‑1                     AGAAGTAGAAGATATTCGGGTGGATCGGCGTTTTATTCTTGTTCAGATATTCAACGAACGCCTTGATGCCGCCTTCATAGTGGAAGTGGTCTTCTTTGCCGTCGCGCTTGTCGCGCAGACGAATGGAAACGTCTGCGTGAGTTGTCGTTC                                                                                                                                   >  1:888209/1‑150                             AAGATATTCGGGTGTATCGGCGTTTTGTTCTTGTTCAGATATTCAACGAACGCCTTGATGCCGCCTTCATAGTGGAAGTGGTCTTCTTTGCCGTCGCGCTTGTCGCGCAGACGAATGGAAACG‑C‑‑CGT‑AGTTGTCGTTCCTCAACTCCGGC                                                                                                                       <  2:1493441/150‑1                                         gggcTCGGCGTTTTGTTCTTGTTCAGATATTCAACGAACGCCTTGATGCCGCCTTCATAGTGGAAGTGGTCTTCTTTGCCGTCGCGCTTGTCGCGCAGACGAATGGAAACGTCTGCGTGAGTTGTCGTTCCTCAACTCCGGCGTTTCCAT                                                                                                               <  2:1000691/146‑1                                          GGATCGGCGTTTTGTTCTTGTTCAGATATTCAACGAACGCCTTGATGCCGCCTTCATAGTGGAAGTGGTCTTCTTTGCCGTCGCGCTTGTCGCGCAGACGAATGGAAACGTCTGCGTGAGTTGTCGTTCCTCAACTCCGGCGTTTCCATT                                                                                                              <  1:441668/150‑1                                          GGATCGGCGTTTTATTCTTGTTCAGATATTCAACGAACGCCTTGATGCCGCCTTCATAGTGGAAGTGGTCTTCTTTGCCGTCGCGCTTGTCGCGCAGACGAATGGAAACGTCTGCGTGAGTTGTCGTTCCTCAACTCCGGCGTTTCCATT                                                                                                              <  2:888209/150‑1                                           GATCGGCGTTTTGTTCTTGTTCAGATATTCAACGAACGCCTTGATGCCGCCTTCATAGTGGAAGTGGTCTTCTTTGCCGTCGCGCTTGTCGCGCAGACGAATGGAAACGTCTGCGTGAGTTGTCGTTCCTCAACTCCGGCGTTTCCATTC                                                                                                             <  1:388987/150‑1                                            ATCGGCGTTTTGTTCTTGTTCAGATATTCAACGAACGCCTTGATGCCGCCTTCATAGTGGAAGTGGTCTTCTTTGCCGTCGCGCTTGTCGCGCAGACGAATGGAAACGTCTGCGTGAGTTGTCGTTCCTCAACTCCGGCGTTTCCATTCG                                                                                                            <  1:1108167/150‑1                                                                                                                                                      CGTCTGCGTGAGTTGTCGTTCCTCAACTCCGGCGTTTCCATTCGTCTGCGCGACAAGCGCGACGGCAAAGAAGACCACTTCCACTATGAATGCGGCATCAAGGCGTTCGTTGAATATCTGAACAAGAACAAAACGCCGATCCACCCGAAT  <  2:966673/150‑1                                                                                                                                                                                                                                                                                                             AATACCGTCTTTTTCAGTGGAGAAGTAGAAGATATTCGGGTGGATCGGCGTTTTGTTCTTGTTCAGATATTCAACGAACGCCTTGATGCCGCCTTCATAGTGGAAGTGGTCTTCTTTGCCGTCGCGCTTGTCGCGCAGACGAATGGAAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3879370‑3879520 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaaacgTCTGCGTGAGTTGTCGTTCCTCAACTCCGGCGTTTCCATTCGTCTGCGCGACAAGCGCGACGGCAAAGAAGACCACTTCCACTATGAAGGCGGCATCAAGGCGTTCGTTGAATATCTGAACAAGAACAAAACGCCGATCCACCCGAAT  <  NC_000913/3879550‑3879403

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.