New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3953916	76 (0.870)	7 (0.080)	6/266	NT	8.8%	coding (439/1851 nt)	ilvD	dihydroxy‑acid dehydratase
	?	NC_000913	= 3953923	72 (0.860)					coding (446/1851 nt)	ilvD	dihydroxy‑acid dehydratase

CTGATTCCGTTGAGTATATGGTCAACGCCCACTGCGCCGACGCCATGGTCTGCATCTCTAACTGCGACAAAATCACCCCGGGGATGCTGATGGCTTCCCTGCGCCTGAATATTCCGGTGATCTTTGTTTCCGG‑‑‑‑‑CGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3953779‑3953916 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccTCCATCGGGCCGCCGGAAACAAAGATCACCGGAATATTCAGGCGCAGGGAAGCCATCAGCATCCCCGGGGTGATTTTGTCGCAGTTAGAGATGCAGACCATGGCGTCGGCGCAGTGGGCGTTGACCATATACTCAACGGAATCAGCGAT  <  NC_000913/3953923‑3953775                                                                                                                                                                                                                                                                                                      CTGATTCCGTTGAGTATATGGTCAACGCCCACTGCGCCGACGCCATGGTCTGCATCTCTAACTGCGACAAAATCACCCCGGGGATGCTGATGGCTTCCCTGCGCCTGAATATTCCGGTGATCTTTGTTTC‑‑‑‑‑‑‑‑CGGCCTCCATCGGGCCGCCG                                                                                                                                        <  2:1431724/150‑1      TCCGTTGAGTATATGGTCAACGCCCACTGCGCCGACGCCATGGTCTGCATCTCTAACTGCGACAAAATCACCCCGGGGATGCTGATGGCTTCCCTGCGCCTGAATATTCCGGTGATCTTTGTTTC‑‑‑‑‑‑‑‑CGGCCTCCATCGGGCCGCCGGAAAC                                                                                                                                   <  1:1308899/150‑1      TCCGTTGAGTATATGGTCAACGCCCACTGCGCCGACGCCATGGTCTGCATCTCTAACTGCGACAAAATCACCCCGGGGAGGCTGATGGCTTCCCTGCGCCTGAATATTCCGGTGATCTTTGTTTC‑‑‑‑‑‑‑‑CGGCCTCCATCGGGCCGCCGGAAAC                                                                                                                                   <  1:575357/150‑1                       CAACGCCCACTGCGCCGACGCCATGGTCTGCATCTCTAACTGCGACAAAATCACCCCGGGGATGCTGATGGCTTCCCTGCGCCTGAATATTCCGGTGATCTTTGTTTCCGG‑‑‑‑‑CGGCCTCCATCGGGCCGCCGGAAACAAAGATCACCGGAA                                                                                                                     >  1:564591/1‑150                              CACTGCGCCGACGCCATGGTCTGCATCTCTAACTGCGACAAAATCACCCCGGGGATGCTGATGGCTTCCCTGCGCCTGAATATTCCGGTGATCTTTGTTTCCGG‑‑‑‑‑CGGCCTCCATCGGGCCGCCGGAAACAAAGATCACCGGAATATTCAG                                                                                                              <  2:564591/150‑1                               ACTGCGCCGACGCCATGGTCTGCATCTCTAACTGCGACAAAATCACCCCGGGGATGCTGATGGCTTCCCTGCGCCTGAATATTCCGTTGATCTTTGTTTCCGG‑‑‑‑‑CGGCCTCCATCGGGCCGCCGGAAACAAAGATCACCGGAATATTCAGG                                                                                                             <  2:1293086/150‑1                                               GGTCTGCATCTCTAACTGCGACAAAATCACCCCGGGGATGCTGATGGCTTCCCTGCGCCTGAATATTCCGGTGATCTTTGTTTCCGGCGGCCCGGCCTCCATCGGGCCGCCGGAAACAAAGATCACCGGAATATTCAGGCGCAGGGAAGC                                                                                                  <  2:1474240/150‑1                                                                                                                                           CGGCCTCCATCGGGCCGCCGGAAACAAAGATCACCGGAATATTCAGGCGCAGGGAAGCCATCAGCATCCCCGGGGTGATTTTGTCGCAGTTAGAGATGCAGACCATGGCGTCGGCGCAGTGGGCGTTGACCATATACTCAACGGAATCAG      <  2:560847/150‑1                                                                                                                                             GCCTCCATCGGGCCGCCGGAAACAAAGATCACCGGAATATTCAGGCGCAGGGAAGCCATCAGCATCCCCGGGGTGATTTTGTCGCAGTTAGAGATGCAGACCATGGCGTCGGCGCAGTGGGCGTTGACCATATACTCAACGGAATCAGCG    <  2:1296314/150‑1                                                                                                                                               CTCCATCGGGCCGCCGGAAACAAAGATCACCGGAATATTCAGGCGCAGGGAAGCCATCAGCATCCCCGGGGTGATTTTGTCGCAGTTAGAGATGCAGACCATGGCGTCGGCGCAGTGGGCGTTGACCATATACTCAACGGAATCAGCGAT  <  2:1217045/150‑1                                                                                                                                                                                                                                                                                                      CTGATTCCGTTGAGTATATGGTCAACGCCCACTGCGCCGACGCCATGGTCTGCATCTCTAACTGCGACAAAATCACCCCGGGGATGCTGATGGCTTCCCTGCGCCTGAATATTCCGGTGATCTTTGTTTCCGG‑‑‑‑‑CGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3953779‑3953916 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccTCCATCGGGCCGCCGGAAACAAAGATCACCGGAATATTCAGGCGCAGGGAAGCCATCAGCATCCCCGGGGTGATTTTGTCGCAGTTAGAGATGCAGACCATGGCGTCGGCGCAGTGGGCGTTGACCATATACTCAACGGAATCAGCGAT  <  NC_000913/3953923‑3953775

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.