New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1138725	71 (0.810)	5 (0.060)	4/260	NT	6.6%	coding (348/1644 nt)	flgK	flagellar hook‑filament junction protein 1
	?	NC_000913	= 1138733	75 (0.910)					coding (356/1644 nt)	flgK	flagellar hook‑filament junction protein 1

ATGATGCGTTTATTACCAACCAGTTACGTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATCAATATCTGCGCGACCAGGACAAACAGGTCAATATCGCGATAGGTGCCAGCGT  >  NC_000913/1138577‑1138874                                                                                                                                                     |                                                                                                                                                      atgatgCGTTTATTACCAACCAGTTACGTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGcc                                                                                                                                                      <  1:95072/150‑1 (MQ=255)   gatgCGTTTATTACCAACCAGTTACGTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTg                                                                                                                                                    >  1:856048/1‑150 (MQ=255)     tgCGTTTATTACCAACCAGTTACGTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCa                                                                                                                                                  <  1:910417/150‑1 (MQ=255)     tgCGTTTATTACCAACCAGTTACGTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCa                                                                                                                                                  >  1:560237/1‑150 (MQ=255)      gCGTTTATTACCAACCAGTTACGTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCaa                                                                                                                                                 >  2:1226385/1‑150 (MQ=255)       cGTTTATTACCAACCAGTTACGTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCaaa                                                                                                                                                >  2:1207037/1‑150 (MQ=255)         tttATTACCAACCAGTTACGTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACg                                                                                                                                              >  2:1148754‑M2/1‑149 (MQ=255)             ttaCCAACCAGTTACGTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACgctgg                                                                                                                                          >  1:1207037‑M2/1‑145 (MQ=255)             ttaCCAACCAGTTACGTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACgctgg                                                                                                                                          <  2:401722‑M2/150‑6 (MQ=255)              taCCAACCAGTTACGTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACgctggt                                                                                                                                         >  2:1376343‑M2/1‑144 (MQ=255)              taCCAACCAGTTACGTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACgctggt                                                                                                                                         >  2:921608‑M2/1‑144 (MQ=255)                  aaccaGTTACGTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCgtttgcaggctggtgaag                                                                                                                                     <  2:1369713‑M1/150‑19 (MQ=255)                  aaccaGTTACGTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCgtttgcaggctggtgaag                                                                                                                                     <  2:102614‑M1/150‑19 (MQ=255)                            gTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAg                                                                                                                           <  1:959033/150‑1 (MQ=255)                            gTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAg                                                                                                                           >  1:541897/1‑150 (MQ=255)                             tGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGa                                                                                                                          >  1:488877/1‑150 (MQ=255)                                ggcgCAGACGCAAAGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGAccc                                                                                                                       >  1:724559/1‑150 (MQ=255)                                        cGCAAAGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAgcgc                                                                                                               >  2:1309805/1‑150 (MQ=255)                                          cAAAGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAgcgcgc                                                                                                             >  1:548654/1‑150 (MQ=255)                                           aaaGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGcc                                                                                                            <  2:908675/150‑1 (MQ=255)                                            aaGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCgtttgcaggctggtgaagaaatcctgcatctgtgttgccagcga                                                                                                           <  2:1348764‑M1/150‑45 (MQ=255)                                             aGTATCGGTCTGACTGCACGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTAGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACCCTGGTGAGTAACGCGGAATACACGGCAGCGCGCCac                                                                                                          >  2:237736/1‑149 (MQ=255)                                               tAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGgc                                                                                                        <  1:755346/150‑1 (MQ=255)                                                aGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGgcg                                                                                                       <  1:391815/150‑1 (MQ=255)                                                  cGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCt                                                                                                     >  2:954635/1‑150 (MQ=255)                                                     tCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGAt                                                                                                  >  1:1301227/1‑150 (MQ=255)                                                        gACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCgtttgcaggctggtgaagaaatcctg                                                                                                                             >  2:592028‑M1/1‑94 (MQ=255)                                                        gACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCgtttgcaggctggtgaagaaatcctg                                                                                                                             <  1:592028‑M1/120‑27 (MQ=255)                                                        gACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTgg                                                                                               >  2:1065857/1‑150 (MQ=255)                                                        gACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTgg                                                                                               >  1:1324872/1‑150 (MQ=255)                                                         aCTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTggg                                                                                              >  2:814169/1‑150 (MQ=255)                                                         aCTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTggg                                                                                              <  2:560237/150‑1 (MQ=255)                                                         aCTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTggg                                                                                              <  2:94228/150‑1 (MQ=255)                                                         aCTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTggg                                                                                              <  2:345838/150‑1 (MQ=255)                                                         aCTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTggg                                                                                              <  2:250760/150‑1 (MQ=255)                                                            gCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGaaa                                                                                           >  2:1128736/1‑150 (MQ=255)                                                             cccGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGgc                                                                                                        <  1:66909/136‑1 (MQ=255)                                                             cccGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGgc                                                                                                        >  2:66909/1‑136 (MQ=255)                                                              ccGCTATGAGCAGATGTCGAAAATCGACAAAATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATc                                                                                         <  2:1372848/150‑1 (MQ=255)                                                                  tATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGaa                                                                                     <  2:444987/150‑1 (MQ=255)                                                                     gAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGa                                                                                  >  2:165678/1‑150 (MQ=255)                                                                       gCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGAtt                                                                                >  1:69084/1‑150 (MQ=255)                                                                         aGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTgg                                                                              <  1:702995/150‑1 (MQ=255)                                                                           aTGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTg                                                                            <  1:155515/150‑1 (MQ=255)                                                                           aTGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTg                                                                            <  1:1162042/150‑1 (MQ=255)                                                                             gTCGAAAATCGACAATATGCTCTCCCCCAGTCCCTCTTCGCTGGCACCACAGATGCAGGATTTCTTCACCCGCCTGCAAACCCGGGTGAGTACCGCGGCAGACCCGGCAGCGCGCCCGGCGCGGATTGGGATCTCAGAAGGATTGGTGaa                                                                          >  2:810186/1‑150 (MQ=255)                                                                               cGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCACTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGAGAATc                                                                        >  1:602228/1‑150 (MQ=255)                                                                                     tCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTa                                                                  <  2:180843/150‑1 (MQ=255)                                                                                      cGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTaa                                                                 >  2:1040875/1‑150 (MQ=255)                                                                                           atatGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAacca                                                            >  2:1031902/1‑150 (MQ=255)                                                                                             atGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAaccacc                                                          >  1:381788/1‑150 (MQ=255)                                                                                              tGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCg                                                         >  1:1468609/1‑150 (MQ=255)                                                                                               gCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGa                                                        >  1:554109/1‑150 (MQ=255)                                                                                                  ctcCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATCa                                                     >  2:581713/1‑150 (MQ=255)                                                                                                  ctcCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATCa                                                     >  2:926195/1‑150 (MQ=255)                                                                                                  ctcCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATCa                                                     >  1:566861/1‑150 (MQ=255)                                                                                                    ccaccaGTACCTCTTCGATGGCAACACAGATGCACGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTCATAGGCAAATCAGAAGGATTGCTGAATCAGTTTAAAACCACCGATCAat                                                   >  2:744/1‑150 (MQ=255)                                                                                                     caccaGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATCAata                                                  >  1:922806/1‑150 (MQ=255)                                                                                                         aGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATCAATATCTg                                              >  1:895602/1‑150 (MQ=255)                                                                                                               tctTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATCAATATCTGCGCGAc                                        <  2:541897/150‑1 (MQ=255)                                                                                                                  tCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACgctggtgaagaaatcctgcatctgtgttgccagcgaagaggtactggtggagagcatattgtcgattttcgacatctgctcatagcgggcagtcagaccgctactt                                     <  2:1348764‑M2/150‑107 (MQ=255)                                                                                                                  tCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATCAATATCTGCGCGACCAg                                     >  2:201291/1‑150 (MQ=255)                                                                                                                   cGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATCAATATCTGCGCGACCAgg                                    >  2:920789/1‑150 (MQ=255)                                                                                                                   cGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATCAATATCTGCGCGACCAgg                                    >  1:1176388/1‑150 (MQ=255)                                                                                                                   cGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATCAATATCTGCGCGACCAgg                                    <  1:165678/150‑1 (MQ=255)                                                                                                                     cTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATCAATATCTGCGCGACCAGGAc                                  <  1:954635/150‑1 (MQ=255)                                                                                                                     cTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATCAATATCTGCGCGACCAGGAc                                  <  1:401722/150‑1 (MQ=255)                                                                                                                        gCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAAGATTGGTGAATCAGTTTAAAACCACCGATCAATATCTGCGCGACCAGGACaaa                               >  1:1112352/1‑150 (MQ=255)                                                                                                                         cAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATCAATATCTGCGCGACCAGGACAAAc                              <  2:917831/150‑1 (MQ=255)                                                                                                                         cAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATCAATATCTGCGCGACCAGGACAAAc                              >  1:247976/1‑150 (MQ=255)                                                                                                                            cacaGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATCAATATCTGCGCGACCAGGACAAACAgg                           <  1:979763/150‑1 (MQ=255)                                                                                                                            cacaGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATCAATATCTGCGCGACCAGGACAAACAgg                           <  1:814169/150‑1 (MQ=255)                                                                                                                               aGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAATGATTGGTGAATCAGTTTAAAACCACCGATCAATATCTGCGCGACCAGGACAAACAGTTCa                        <  2:554109/150‑1 (MQ=255)                                                                                                                                 aTGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATCAATATCTGCGCGACCAGGACAAACAGGTCAat                      <  2:756410/150‑1 (MQ=255)                                                                                                                                 aTGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATCAATATCTGCGCGACCAGGACAAACAGGTCAat                      >  2:1336221/1‑150 (MQ=255)                                                                                                                                   gCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATCAATATCTGCGCGACCAGGACAAACAGGTCAatat                    >  2:1244058/1‑150 (MQ=255)                                                                                                                                    cAGGATTTCTTCACCAGCCTGCAAACgctggtgaagaaatcctgcatctgtgttgccagcgaagaggtactggtggagagcatattgtcgattttcgacatctgctcatagcgggcagtc                                                 >  2:592028‑M2/1‑26 (MQ=255)                                                                                                                                    cAGGATTTCTTCACCAGCCTGCAAACgctggtgaagaaatcctgcatctgtgttgccagcgaagaggtactggtggagagcatattgtcgattttcgacatctgctcatagcgggcagtc                                                 <  1:592028‑M2/120‑95 (MQ=255)                                                                                                                                    cAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATCAATATCTGCGCGACCAGGACAAACAGGTCAATATc                   >  2:985269/1‑150 (MQ=255)                                                                                                                                     aGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATCAATATCTGCGCGACCAGGACAAACAGGTCAATATcg                  <  2:381788/150‑1 (MQ=255)                                                                                                                                     aGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATCAATATCTGCGCGACCAGGACAAACAGGTCAATATcg                  <  1:1065857/150‑1 (MQ=255)                                                                                                                                     aGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATCAATATCTGCGCGACCAGGACAAACAGGTCAATATcg                  >  1:37067/1‑150 (MQ=255)                                                                                                                                      ggATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATCAATATCTGCGCGACCAGGACAAACAGGTCAATATcgc                 >  2:606033/1‑150 (MQ=255)                                                                                                                                            cttcACCAGCCTGCAAACgctggtgaagaaatcctgcatctgtgttgccagcgaagaggtactggtggagagcatattgtcgattttcgacatctgctcatagcgggcagtcagaccgctactttgcgtctgcgccgcacgtaactggtt           <  2:1369713‑M2/150‑133 (MQ=255)                                                                                                                                            cttcACCAGCCTGCAAACgctggtgaagaaatcctgcatctgtgttgccagcgaagaggtactggtggagagcatattgtcgattttcgacatctgctcatagcgggcagtcagaccgctactttgcgtctgcgccgcacgtaactggtt           <  2:102614‑M2/150‑133 (MQ=255)                                                                                                                                            cttcACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACACGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATCAATATCTGCGCGACCAGGACAAACAGGTCAATATCGCGATAgg           >  2:32706/1‑150 (MQ=255)                                                                                                                                              tcACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATc                                                      <  2:642981/105‑1 (MQ=255)                                                                                                                                              tcACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATc                                                      >  1:642981/1‑105 (MQ=255)                                                                                                                                               cACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATCAATATCTGCGCGACCAGGACAAACAGGTCAATATCGCGATAGGTGc        >  1:22909/1‑150 (MQ=255)                                                                                                                                               cACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATCAATATCTGCGCGACCAGGACAAACAGGTCAATATCGCGATAGGTGc        >  1:120728/1‑150 (MQ=255)                                                                                                                                                aCCAGCgtttgcaggctggtgaagaaatcctgcatctgtgttgccagcgaagaggtactggtggagagcatattgtcgattttcgacatctgctcatagcgggcagtcagaccgctactttgcgtctgcgccgcacgtaactggttggta       >  2:1376343‑M1/1‑6 (MQ=255)                                                                                                                                                aCCAGCgtttgcaggctggtgaagaaatcctgcatctgtgttgccagcgaagaggtactggtggagagcatattgtcgattttcgacatctgctcatagcgggcagtcagaccgctactttgcgtctgcgccgcacgtaactggttggta       >  2:921608‑M1/1‑6 (MQ=255)                                                                                                                                                 ccAGCgtttgcaggctggtgaagaaatcctgcatctgtgttgccagcgaagaggtactggtggagagcatattgtcgattttcgacatctgctcatagcgggcagtcagaccgctactttgcgtctgcgccgcacgtaactggttggtaa      >  1:1207037‑M1/1‑5 (MQ=255)                                                                                                                                                 ccAGCgtttgcaggctggtgaagaaatcctgcatctgtgttgccagcgaagaggtactggtggagagcatattgtcgattttcgacatctgctcatagcgggcagtcagaccgctactttgcgtctgcgccgcacgtaactggttggtaa      <  2:401722‑M1/150‑146 (MQ=255)                                                                                                                                                 ccAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATCAATATCTGCGCGACCAGGACAAACAGGTCAATATCGCGACAGGTGCCa      >  2:1088407/1‑150 (MQ=255)                                                                                                                                                    gCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATCAATATCTGCGCGACCAGGACAAACAGGTCAATATCGCGATAGGTGCCAGCg   <  1:237736/150‑1 (MQ=255)                                                                                                                                                     cgtttgcaggctggtgaagaaatcctgcatctgtgttgccagcgaagaggtactggtggagagcatattgtcgattttcgacatctgctcatagcgggcagtcagaccgctactttgcgtctgcgccgcacgtaactggttggtaataaa  >  2:1148754‑M1/1‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                      ATGATGCGTTTATTACCAACCAGTTACGTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATCAATATCTGCGCGACCAGGACAAACAGGTCAATATCGCGATAGGTGCCAGCGT  >  NC_000913/1138577‑1138874

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.