New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 227947962 (0.710)4 (0.050) 4/254 NT 6.2% coding (282/1191 nt) bcr multidrug efflux pump Bcr
?NC_000913 = 2279502 64 (0.800)coding (259/1191 nt) bcr multidrug efflux pump Bcr

GTCACCAGCATGACAAACGACATCATCCGCGAGAACTCTTCTTTCGGGTAAATATCGCGCATCAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCCCGTAGATTAACTGCCCCAACGCAAAGCCCAGAATATAAGTACTGAGGGTCATCTGCGTACTGC  >  NC_000913/2279333‑2279627
                                                                                                                                                  |                                                                                                                                                    
gTCACCAGCATGACAAACGACATCATCCGCGAGAACTCTTCTTTCGGGTAAATATCGCGCATCAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAAc                                                                                                                                                   >  1:998047/1‑150 (MQ=255)
  cACCAGCATGACAAACGACATCATCCGCGAGAACTCTTCTTTCGGGTAAATATCGCGCATCAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGc                                                                                                                                                 >  1:807406/1‑150 (MQ=255)
  cACCAGCATGACAAACGACATCATCCGCGAGAACTCTTCTTTCGGGTAAATATCGCGCATCAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGc                                                                                                                                                 >  1:233271/1‑150 (MQ=255)
       gCATGACAAACGACATCATCCGCGAGAACTCTTCTTTCGGGTAAATATCGCGCATCAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACg                                                                                                                                            >  1:1101114/1‑150 (MQ=255)
       gCATGACAAACGACATCATCCGCGAGAACTCTTCTTTCGGGTAAATATCGCGCATCAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACg                                                                                                                                            <  2:1263674/150‑1 (MQ=255)
       gCATGACAAACGACATCATCCGCGAGAACTCTTCTTTCGGGTAAATATCGCGCATCAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACg                                                                                                                                            >  1:1490098/1‑150 (MQ=255)
                         tcCGCGAGAACTCTTCTTTCGGGTAAATATCGCGCATCAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCgccgccgcggtggcgtgtgcgttggcaa                                                                                                                          <  1:1263350‑M1/150‑29 (MQ=255)
                         tcCGCGAGAACTCTTCTTTCGGGTAAATATCGCGCATCAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCggcaa                                                                                                                          <  1:533021‑M2/150‑6 (MQ=255)
                         tcCGCGAGAACTCTTCTTTCGGGTAAATATCGCGCATCAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCggcaa                                                                                                                          >  1:68068‑M2/1‑145 (MQ=255)
                           cgcgAGAACTCTTCTTTCGGGTAAATATCGCGCATCAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCggcaaac                                                                                                                        <  1:1168858‑M2/150‑8 (MQ=255)
                            gcgAGAACTCTTCTTTCGGGTAAATATCGCGCATCAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCgccgccgcggtggcgtgtgcgttggcaaaca                                                                                                                       <  2:1464443‑M1/150‑32 (MQ=255)
                            gcgAGAACTCTTCTTTCGGGTAAATATCGCGCATCAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCggcaaaca                                                                                                                       <  1:835519‑M2/150‑9 (MQ=255)
                            gcgAGAACTCTTCTTTCGGGTAAATATCGCGCATCAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCggcaaaca                                                                                                                       <  2:321031‑M2/150‑9 (MQ=255)
                            gcgAGAACTCTTCTTTCGGGTAAATATCGCGCATCAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCggcaaaca                                                                                                                       >  2:1209566‑M2/1‑142 (MQ=255)
                                 aaCTCTTCTTTCGGGTAAATATCGCGCATCAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCgccgccgcggtggcgtgtgcgttggcaaacaccatc                                                                                                                  <  1:323155‑M1/150‑37 (MQ=255)
                                 aaCTCTTCTTTCGGGTAAATATCGCGCATCAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGc                                                                                                                  >  2:1357209/1‑150 (MQ=255)
                                  aCTCTTCTTTCGGGTAAATATCGCGCATCAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCg                                                                                                                 <  1:742286/150‑1 (MQ=255)
                                   ctctTCTTTCGGGTAAATATCGCGCATCAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGt                                                                                                                >  2:751779/1‑150 (MQ=255)
                                   ctctTCTTTCGGGTAAATATCGCGCATCAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGt                                                                                                                >  2:109013/1‑150 (MQ=255)
                                    tcttctTTCGGGTGAATATCGCGCATCAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCggca                                                                                                                           <  2:151273‑M2/138‑5 (MQ=255)
                                    tcttctTTCGGGTCAATATCGCGCATCAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCggca                                                                                                                           >  1:151273‑M2/1‑134 (MQ=255)
                                       tcttTCGGGTAAATATCGCGCATCAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTAccg                                                                                                            >  1:44048/1‑150 (MQ=255)
                                          ttCGGGTAAATATCGCGCATCAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTAccgccg                                                                                                         <  1:1295880/150‑1 (MQ=255)
                                          ttCGGGTAAATATCGCGCATCAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTAccgccg                                                                                                         <  2:1421491/150‑1 (MQ=255)
                                          ttCGGGTAAATATCGCGCATCAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCAGCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTAccgccg                                                                                                         <  1:673935/150‑1 (MQ=255)
                                           tCGGGTAAATATCGCGCATCAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGa                                                                                                        <  2:789397/150‑1 (MQ=255)
                                                   atatCGCGCATCAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCaccacc                                                                                                >  2:214210/1‑150 (MQ=255)
                                                       cgcgCATCAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCt                                                                                            >  2:98997/1‑150 (MQ=255)
                                                        gcgcATCAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCtt                                                                                           >  1:1464815/1‑150 (MQ=255)
                                                              cAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGccc                                                                                     >  2:526626/1‑150 (MQ=255)
                                                              cAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGccc                                                                                     <  1:501825/150‑1 (MQ=255)
                                                                gggCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGa                                                                                   <  2:1431933/150‑1 (MQ=255)
                                                                  gCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACg                                                                                        >  1:488352/1‑143 (MQ=255)
                                                                  gCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACg                                                                                        <  2:488352/143‑1 (MQ=255)
                                                                  gCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAg                                                                                 <  1:1491970/150‑1 (MQ=255)
                                                                    gTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCt                                                                               >  2:821608/1‑150 (MQ=255)
                                                                     ttAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCgccgccgcggtggcgtgtgcgttggcaaacaccatcgatcagctgattgtgatgcgtttcttccacgggctg                                                                              <  2:296774‑M1/150‑73 (MQ=255)
                                                                       aaTGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGGAGCTGTc                                                                            >  1:1103629/1‑150 (MQ=255)
                                                                         tccacgggctggctgCGGCTGCGGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTg                                                                          >  1:1380576/8‑150 (MQ=255)
                                                                         tGACCACGGTGGCCGCAGCCGCATGCAGCCCGTGGAAGAAAAGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTg                                                                          <  2:652168/150‑1 (MQ=255)
                                                                         tGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTg                                                                          <  1:482138/150‑1 (MQ=255)
                                                                            ccACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCa                                                                       >  1:1252528/1‑150 (MQ=255)
                                                                                gCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCgg                                                                   <  2:1490098/150‑1 (MQ=255)
                                                                                 cTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGc                                                                  >  1:982377/1‑150 (MQ=255)
                                                                                   ggCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGccc                                                                <  2:835519/150‑1 (MQ=255)
                                                                                    gccgcagccgcaGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCCCg                                                               >  1:924619/1‑150 (MQ=255)
                                                                                      cgcagccgcagcCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCCCGTa                                                             >  2:994535/1‑150 (MQ=255)
                                                                                      cgcagccgcagcCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCCCGTa                                                             >  1:388127/1‑150 (MQ=255)
                                                                                      cgcagccgcagcCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTCTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCCGCTTACGCCCGAAGCTGTCTGCCATCGGCCCGTa                                                             >  1:72296/1‑150 (MQ=255)
                                                                                             gcagccAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCCCGTAGATTAAc                                                      >  2:97646/1‑150 (MQ=255)
                                                                                              cagccagcCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCCCGTAGATTAACt                                                     <  1:451544/150‑1 (MQ=255)
                                                                                                gccagccCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCCCGTAGATTAACTGc                                                   >  2:1392488/1‑150 (MQ=255)
                                                                                                 ccagccCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCCCGTAGATTAACTGcc                                                  <  1:1200086/150‑1 (MQ=255)
                                                                                                  cagccCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCggcaaacaccatcgatcagctgattgtgatgcgtttcttccacgggctggctgcggctgcggccagcgtggtcattaa                                                 <  2:296774‑M2/150‑79 (MQ=255)
                                                                                                          ggAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCGATCGGCCCGTAGATTAACTGCCCCAACGCaa                                         >  2:445838/1‑150 (MQ=255)
                                                                                                          ggAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCCCGTAGATTAACTGCCCCAACGCaa                                         <  1:994535/150‑1 (MQ=255)
                                                                                                          ggAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCCCGTAGATTAACTGCCCCAACGCaa                                         <  2:1464815/150‑1 (MQ=255)
                                                                                                            aagaaACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCCCGTAGATTAACTGCCCCAACGCAAAg                                       >  1:159040/1‑150 (MQ=255)
                                                                                                              gaaACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCCCGTAGATTAACTGCCCCAACGCAAAGcc                                     <  1:631053/150‑1 (MQ=255)
                                                                                                               aaaCGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCCCGTAGATTAACTGCCCCAACGCAAAGccc                                    >  1:282983/1‑150 (MQ=255)
                                                                                                                aaCGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCCCGTAGATTAACTGCCCCAACGCAAAGCCCa                                   >  1:529980/1‑150 (MQ=255)
                                                                                                                 aCGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCCCGTAGATTAACTGCCCCAACGCAAAGCCCAg                                  <  2:1012374/150‑1 (MQ=255)
                                                                                                                 aCGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCCCGTAGATTAACTGCCCCAACGCAAAGCCCAg                                  <  2:807406/150‑1 (MQ=255)
                                                                                                                    cATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCCCGTAGATTAACTGCCCCAACGCAAAGCCCAGAat                               <  1:97646/150‑1 (MQ=255)
                                                                                                                      tCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCCCGTAGATTAACTGCCCCAACGCAAAGCCCAGAatat                             <  2:233271/150‑1 (MQ=255)
                                                                                                                       cacaATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCCCGTAGATTAACTGCCCCAAc                                             >  2:962065/1‑133 (MQ=255)
                                                                                                                       cacaATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCCCGTAGATTAACTGCCCCAAc                                             <  1:962065/133‑1 (MQ=255)
                                                                                                                          aaTCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGGAGCTGTCTGCCATCGGCCCGTAGATTAACTGTCCCAACGCAAAGCCCAGAATATAAGt                         <  2:1103629/150‑1 (MQ=255)
                                                                                                                             cAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCCCGTAGATTAACTGCCCCAACGCAAAGCCCAGAATATAAGTACt                      >  1:1039653/1‑150 (MQ=255)
                                                                                                                                cTGATCGATGGTGTTTGCCACCGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCCCGTAGATTAACTGCCCCAACGCAAAGCCCAGAATATAAGTACTGAg                   >  2:1450206/1‑150 (MQ=255)
                                                                                                                                cTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCCCGTAGATTAACTGCCCCAACGCAAAGCCCAGAATATAAGTACTGAg                   <  1:1268069/150‑1 (MQ=255)
                                                                                                                                 tGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCCCGTAGATTAACTGCCCCAACGCAAAGCCCAGAATATAAGTACTGAgg                  <  2:924619/150‑1 (MQ=255)
                                                                                                                                    tCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCCCGTAGATTAACTGCCCCAACGCAAAGCCCAGAATATAAGTACTGAGGGTc               <  2:1271208/150‑1 (MQ=255)
                                                                                                                                     cGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCCCGTAGATTAACTGCCCCAACGCAAAGCCCAGAATATAAGTACTGAGGGTCa              <  1:242556/150‑1 (MQ=255)
                                                                                                                                      gATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCggcaaacaccatcgatcagctgattgtgatgcgtttcttccacgggctggctgcggctgcggccagcgtggtcattaacgccctgatgcgcgatatttacccgaaagaagagtt             <  1:323155‑M2/150‑115 (MQ=255)
                                                                                                                                         ggTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCCCGTAGATTAACTGCCCCAACGCAAAGCCCAGAATATAAGTACTGAGGGTCATCTg          <  2:1456687/150‑1 (MQ=255)
                                                                                                                                         ggTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCCCGTAGATTAACTGCCCCAACGCAAAGCCCAGAATATAAGTACTGAGGGTCATCTg          <  1:751779/150‑1 (MQ=255)
                                                                                                                                           tgtTTGCCgccgccgcggtggcgtgtgcgttggcaaacaccatcgatcagctgattgtgatgcgtttcttccacgggctggctgcggctgcggccagcgtggtcattaacgccctgatgcgcgatatttacccgaaagaagagttctcgc        <  1:835519‑M1/150‑143 (MQ=255)
                                                                                                                                           tgtTTGCCgccgccgcggtggcgtgtgcgttggcaaacaccatcgatcagctgattgtgatgcgtttcttccacgggctggctgcggctgcggccagcgtggtcattaacgccctgatgcgcgatatttacccgaaagaagagttctcgc        >  2:1209566‑M1/1‑8 (MQ=255)
                                                                                                                                           tgtTTGCCgccgccgcggtggcgtgtgcgttggcaaacaccatcgatcagctgattgtgatgcgtttcttccacgggctggctgcggctgcggccagcgtggtcattaacgccctgatgcgcgatatttacccgaaagaagagttctcgc        <  2:321031‑M1/150‑143 (MQ=255)
                                                                                                                                           tgtTTGCCAACGCACACGCCACCGCGGCGGCggcaaacaccatcgatcagctgattgtgatgcgtttcttccacgggctggctgcggctgcggccagcgtggtcattaacgccctgatgcgcgatatttacccgaaagaagagttctcgc        <  2:1464443‑M2/150‑120 (MQ=255)
                                                                                                                                            gtTTGGCAACGCTCACGCCACCGCGGCGGCGGAAAACAGCAGCGTACCGCCGATCACGACCGGCTTACGCCCGAAGCTGTCTGCCATCGTCCCGTAGATTAACTGCCCCAACGCAAAGCGCAGAATATTAGTACTGAGGGTCATCTGCGt       <  2:762440/150‑1 (MQ=255)
                                                                                                                                            gtTTGCCgccgccgcggtggcgtgtgcgttggcaaacaccatcgatcagctgattgtgatgcgtttcttccacgggctggctgcggctgcggccagcgtggtcattaacgccctgatgcgcgatatttacccgaaagaagagttctcgcg       <  1:1168858‑M1/150‑144 (MQ=255)
                                                                                                                                            gtTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCCCGTAGATTAACTGCCCCAACGCAAAGCCCAGAATATAAGTACTGAGGGTCATCTGCGt       >  1:1294165/1‑150 (MQ=255)
                                                                                                                                              ttGCCgccgccgcggtggcgtgtgcgttggcaaacaccatcgatcagctgattgtgatgcgtttcttccacgggctggctgcggctgcggccagcgtggtcattaacgccctgatgcgcgatatttacccgaaagaagagttctcgcgga     >  1:68068‑M1/1‑5 (MQ=255)
                                                                                                                                              ttGCCgccgccgcggtggcgtgtgcgttggcaaacaccatcgatcagctgattgtgatgcgtttcttccacgggctggctgcggctgcggccagcgtggtcattaacgccctgatgcgcgatatttacccgaaagaagagttctcgcgga     <  1:533021‑M1/150‑146 (MQ=255)
                                                                                                                                              ttGCCAACGCACACGCCACCGCGGCGGCggcaaacaccatcgatcagctgattgtgatgcgtttcttccacgggctggctgcggctgcggccagcgtggtcattaacgccctgatgcgcgatatttacccgaaagaagagttctcgcgga     <  1:1263350‑M2/150‑123 (MQ=255)
                                                                                                                                              ttGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCCCGTAGATTAACTGCCCCAACGCAAAGCCCAGAATATAAGTACTGAGGGTCATCTGCGTAc     >  1:413090/1‑150 (MQ=255)
                                                                                                                                               tGCCgccgccgcggtggcgtgtgcgttggcaaacaccatcgatcagctgattgtgatgcgtttcttccacgggctggctgcggctgcggccagcgtggtcattaacgccctgatgcgcgatattgacccgaaagaaga                >  1:151273‑M1/1‑4 (MQ=255)
                                                                                                                                               tGCCgccgccgcggtggcgtgtgcgttggcaaacaccatcgatcagctgattgtgatgcgtttcttccacgggctggctgcggctgcggccagcgtggtcattaacgccctgatgcgcgatattcacccgaaagaaga                <  2:151273‑M1/138‑135 (MQ=255)
                                                                                                                                                gCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCCCGTAGATTAACTGCCCCAACGCAAAGCCCAGAATATAAGTACTGAGGGTCATCTGCGTACTg   >  1:1015252/1‑150 (MQ=255)
                                                                                                                                                 ccAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCCCGTAGATTAACTGCCCCAACGCAAAGCCCAGAATATAAGTACTGAGGGTCATCTGCGTACTGc  >  1:947248/1‑150 (MQ=255)
                                                                                                                                                 ccAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCCCGTAGAATAACTGCCCCAACGCAAAGCCCACAATATAACTACTGAGGGTCATCTGCGTACTGc  >  1:412447/1‑150 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
GTCACCAGCATGACAAACGACATCATCCGCGAGAACTCTTCTTTCGGGTAAATATCGCGCATCAGGGCGTTAATGACCACGCTGGCCGCAGCCGCAGCCAGCCCGTGGAAGAAACGCATCACAATCAGCTGATCGATGGTGTTTGCCAACGCACACGCCACCGCGGCGGCGGCAAACACCAGCGTACCGCCGAGCACCACCGGCTTACGCCCGAAGCTGTCTGCCATCGGCCCGTAGATTAACTGCCCCAACGCAAAGCCCAGAATATAAGTACTGAGGGTCATCTGCGTACTGC  >  NC_000913/2279333‑2279627

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.