BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4288211 =	90 (1.030)	6 (0.070)	4/264	NT	5.8%	coding (448/1437 nt)	nrfA	cytochrome c552 nitrite reductase
*	?	NC_000913	4288265 =	109 (1.300)	6 (0.070)	4/264	NT	5.8%	coding (502/1437 nt)	nrfA	cytochrome c552 nitrite reductase

Only 100 of 134 total aligned reads displayed.

TACCGATGGCATGCTGGAGTTGTAAAAGCCCGGATGTGGCGCGTCTGATCCAGAAAGACGGCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAATCGATGGTTTGCGGTCAGTGCCATGTGGAGTATTAC  >  NC_000913/4288116‑4288414

tACCGATGGCATGCTGGAGTTGTAAAAGCCCGGATGTGGCGCGTCTGATCCAGAAAGACGGCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCct                                                                                                                                                       >  1:860354/1‑150 (MQ=255)

 aCCGATGGCATGCTGGAGTTGTAAAAGCCCGGATGTGGCGCGTCTGATCCAGAAAGACGGCGAAGATGGCTACTTCCACGGTAATTGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCctc                                                                                                                                                      <  2:805099/150‑1 (MQ=255)

   cGATGGCATGCTGGAGTTGTAAAAGCCCGGATGTGGCGCGTCTGATCCAGAAAGACGGCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCtctc                                                                                                                                                    <  2:1347464/150‑1 (MQ=255)

      tGGCATGCTGGAGTTGTAAAAGCCCGGATGTGGCGCGTCTGATCCAGAAAGACGGCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCag                                                                                                                                                 <  1:803561/150‑1 (MQ=255)

        gCATGCTGGAGTTGTAAAAGCCCGGATGTGGCGCGTCTGATCCAGAAAGACGGCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCagag                                                                                                                                               >  1:50210/1‑150 (MQ=255)

         cATGCTGGAGTTGTAAAAGCCCGGATGTGGCGCGTCTGATCCAGAAAGACGGCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGt                                                                                                                                              <  1:606125/150‑1 (MQ=255)

           tGCTGGAGTTGTAAAAGCCCGGATGTGGCGCGTCTGATCCAGAAAGACGGCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTc                                                                                                                                            >  2:1075615/1‑150 (MQ=255)

                  gTTGTAAAAGCCCGGATGTGGCGCGTCTGATCCAGAAAGACGGCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAg                                                                                                                                     >  1:940172/1‑150 (MQ=255)

                   ttGTAAAAGCCCGGATGTGGCGCGTCTGATCCAGAAAGACGGCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAgg                                                                                                                                    <  2:967485/150‑1 (MQ=255)

                    tGTAAAAGCCCGGATGTGGCGCGTCTGATCCAGAAAGACGGCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGc                                                                                                                                   <  1:1530513/150‑1 (MQ=255)

                     gTAAAAGCCCGGATGTGGCGCGTCTGATCCAGAAAGACGGCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCa                                                                                                                                  >  2:1051607/1‑150 (MQ=255)

                       aaaaGCCCGGATGTGGCGCGTCTGATCCAGAAAGACGGCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCaaa                                                                                                                                >  2:1430187/1‑150 (MQ=255)

                       aaaaGCCCGGATGTGGCGCGTCTGATCCAGAAAGACGGCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCaaa                                                                                                                                >  2:380234/1‑150 (MQ=255)

                       aaaaGCCCGGATGTGGCGCGTCTGATCCAGAAAGACGGCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCaaa                                                                                                                                >  1:180459/1‑150 (MQ=255)

                         aaGCCCGGATGTGGCGCGTCTGATCCAGAAAGACGGCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAAcc                                                                                                                              <  2:1440943/150‑1 (MQ=255)

                         aaGCCCGGATGTGGCGCGTCTGATCCAGAAAGACGGCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGACGATTGCCATAACACCGCCTCTCAAGAGTTCGCCAAAGGCAAAcc                                                                                                                              >  2:27493/1‑150 (MQ=255)

                          aGCCCGGATGTGGCGCGTATGATCCAGAAAGACGGCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCg                                                                                                                             >  2:546079/1‑150 (MQ=255)

                             ccGGATGTGGCGCGTCTGATCCAGAAAGACGGCGAAGATGGCTACTTCCACGGTAAATGTGCGCGCGGCGGTCCGGAAATCTTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAATGGCAAACCGTAg                                                                                                                          <  2:997318/150‑1 (MQ=255)

                               ggATGTGGCGCGTCTGATCCAGAAAGACGGCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGtt                                                                                                                        >  1:54849/1‑150 (MQ=255)

                               ggATGTGGCGCGTCTGATCCAGAAAGACGGCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGtt                                                                                                                        >  2:1011863/1‑150 (MQ=255)

                                   gtgGCGCGTCTGATCCAGAAAGACGGCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAAcc                                                                                                                    >  2:1479365/1‑150 (MQ=255)

                                    tgGCGCGTCTGATCCAGAAAGACGGCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAAccc                                                                                                                   <  2:797225/150‑1 (MQ=255)

                                     ggCGCGTCTGATCCAGAAAGACGGCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCt                                                                                                                  >  2:362740/1‑150 (MQ=255)

                                      gcgcGTCTGATCCAGAAAGACGGCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCtt                                                                                                                 <  2:132599/150‑1 (MQ=255)

                                            cTGATCCAGAAAGACGGCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCccgt                                                                                                           >  2:226783/1‑150 (MQ=255)

                                                tCCAGAAAGACGGCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCccgtccgt                                                                                                       <  2:753347/150‑1 (MQ=255)

                                                 ccAGAAAGACGGCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTa                                                                                                      >  2:46757/1‑150 (MQ=255)

                                                 ccAGAAAGACGGCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTa                                                                                                      >  2:789375/1‑150 (MQ=255)

                                                 ccAGAAAGACGGCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTa                                                                                                      >  1:1286159/1‑150 (MQ=255)

                                                   cgAAAGACGTCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAATTCGTCAACAACTTAGGTTGTGCCGATTGCGATAACTCCGCCTCTCCAGAGTTCGCCAAAGTCAAACCGGAGTTAACCCTTTCCCGTCCGTATg                                                                                                    <  1:670594/149‑1 (MQ=255)

                                                   aGAAAGACGGCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATg                                                                                                    >  1:1053236/1‑150 (MQ=255)

                                                       aGACGGCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGc                                                                                                >  1:635074/1‑150 (MQ=255)

                                                          cGGCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTcg                                                                                             <  1:1075615/150‑1 (MQ=255)

                                                                 gATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATg                                                                                      <  1:1408566/150‑1 (MQ=255)

                                                                     gCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAg                                                                                  <  2:374203/150‑1 (MQ=255)

                                                                       tACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTcgcgcg                                                                                         <  2:806465/141‑1 (MQ=255)

                                                                       tACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTcgcgcg                                                                                         >  1:806465/1‑141 (MQ=255)

                                                                         cTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCAt                                                                              <  2:1238755/150‑1 (MQ=255)

                                                                            ccACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATCGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTgg                                                                           <  1:1365168/150‑1 (MQ=255)

                                                                             cACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGt                                                                          >  1:1073382/1‑150 (MQ=255)

                                                                                gttAAATGCGCGCGCGGCGGTCAGGAAATCGTCAACAACTTAGGTTCTGACGATTGCCATAACCCAGCCTCTCCAGAGTTCCACAAACGCAAACCGCAGTTAACCCTTTCCCGTCCGTAAGCGCCTCGCGCGATGAATGCCATTGCTaaa                                                                       >  2:4612/3‑150 (MQ=255)

                                                                                  tAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAAcc                                                                     <  1:1430187/150‑1 (MQ=255)

                                                                                    aaTGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTACCCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCtt                                                                   >  2:606350/1‑150 (MQ=255)

                                                                                       tctggagaggcggtgttatggcaatcggcacaacctaagttgttgacgatttccggaccgccTCTACAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGACGCCATTGGTAACCCTTTTg                                                                >  1:555280‑M2/63‑150 (MQ=255)

                                                                                       gggCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTg                                                                <  1:380234/150‑1 (MQ=255)

                                                                                       cggCGCGCGGCGGTCCGGAAATCGGCAACAACTTAGGGTGTTCCGATTGCCATACCACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATCCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTg                                                                <  2:57704/149‑1 (MQ=255)

                                                                                          cgcgcgGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTgaga                                                             >  2:185728/1‑150 (MQ=255)

                                                                                            cgcgGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGaaa                                                           >  1:1217922/1‑150 (MQ=255)

                                                                                            cgcgGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGaaa                                                           >  1:1169613/1‑150 (MQ=255)

                                                                                            cgcgGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGaaa                                                           >  2:1331944/1‑150 (MQ=255)

                                                                                            cgcgGCGGGCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCGCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGaaa                                                           <  1:315841/150‑1 (MQ=255)

                                                                                             gcggcgGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAg                                                          >  1:480914/1‑150 (MQ=255)

                                                                                             gcggcgGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAg                                                          <  2:180459/150‑1 (MQ=255)

                                                                                               ggcggtgttatggcaatcggcacaacctaagttgttgacgatttccggaccgccTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTgg                                                                           >  1:1531263‑M2/55‑131 (MQ=255)

                                                                                               ggcggtgttatggcaatcggcacaacctaagttgttgacgatttccggaccgccTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGcc                                                        >  1:461581‑M2/55‑150 (MQ=255)

                                                                                                GCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCg                                                       >  1:1529845‑M1/1‑150 (MQ=255)

                                                                                                 CGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCgg                                                      >  1:46757‑M1/1‑150 (MQ=255)

                                                                                                  GGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGa                                                     <  2:468612‑M1/150‑1 (MQ=255)

                                                                                                       ggAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGttt                                                <  2:912920/150‑1 (MQ=255)

                                                                                                       ggAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGttt                                                <  1:288759/150‑1 (MQ=255)

                                                                                                       ggAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGttt                                                <  1:239640/150‑1 (MQ=255)

                                                                                                            tCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGAcc                                           <  1:432555/150‑1 (MQ=255)

                                                                                                            caatcggcacaacctaagttgttgacgatttccggaccgccTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGAcc                                           <  1:802153‑M2/109‑1 (MQ=255)

                                                                                                             cGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCTGCTAGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCa                                          <  1:1282616/150‑1 (MQ=255)

                                                                                                              gTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGCCCAg                                         >  2:1218810/1‑150 (MQ=255)

                                                                                                                caacaaCTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCGGTATGCGGCTCGCGCTATGGAAGCCATTGGTTAACCTTTTGAGAAAGCCGGACGTTTCGAgcagca                                       <  1:731427/150‑1 (MQ=255)

                                                                                                                caacaaCTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCa                                       >  2:1134418/1‑150 (MQ=255)

                                                                                                                  acaacTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAAt                                     >  1:1032224/1‑150 (MQ=255)

                                                                                                                  acaacTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAAt                                     >  1:380680/1‑150 (MQ=255)

                                                                                                                      cTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAATCGAt                                 <  1:468612/150‑1 (MQ=255)

                                                                                                                      cTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAATCGAt                                 >  1:106482/1‑150 (MQ=255)

                                                                                                                        tAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCATACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAATCGATgg                               <  1:364461/150‑1 (MQ=255)

                                                                                                                        tAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAATCGATgg                               <  1:997685/150‑1 (MQ=255)

                                                                                                                          ggTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAATCGATGGtt                             >  1:972502/1‑150 (MQ=255)

                                                                                                                            ttGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAATCGATGGTTTg                           <  2:572280/150‑1 (MQ=255)

                                                                                                                             tgtgCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAATCGATGGTTTGc                          <  2:1032224/150‑1 (MQ=255)

                                                                                                                              gtgCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAATCGATGGTTTGCg                         >  2:853308/1‑150 (MQ=255)

                                                                                                                              gtgCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAATCGATGGTTTGCg                         >  1:563246/1‑150 (MQ=255)

                                                                                                                              gtgCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCATATCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAATCGATGGTTTGCg                         >  2:565524/1‑150 (MQ=255)

                                                                                                                               tgCCGATTGCCATAACACCGCGTCTCCAGTGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTGCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCCTTTGAGAAAGCCGGACGTTTCGACCAGCAATCGATGGTTTGCgg                        <  2:550876/150‑1 (MQ=255)

                                                                                                                                gCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAATCGATGGTTTGCGGt                       >  1:1227257/1‑150 (MQ=255)

                                                                                                                                gCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAATCGATGGTTTGCGGt                       >  2:1087230/1‑150 (MQ=255)

                                                                                                                                   gATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAATCGATGGTTTGCGGTCAg                    >  2:64803/1‑150 (MQ=255)

                                                                                                                                   gATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAATCGATGGTTTGCGGTCAg                    >  1:772108/1‑150 (MQ=255)

                                                                                                                                       gCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGTAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAATCGATGGTTTGCGGTCAGTGcc                >  1:1418892/1‑150 (MQ=255)

                                                                                                                                       gCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAATCGATGGTTTGCGGTCAGTGcc                >  1:929003/1‑150 (MQ=255)

                                                                                                                                       gCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAATCGATGGTTTGCGGTCAGTGcc                <  1:748143/150‑1 (MQ=255)

                                                                                                                                       gCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAATCGATGGTTTGCGGTCAGTGcc                >  2:722599/1‑150 (MQ=255)

                                                                                                                                       gCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAATCGATGGTTTGCGGTCAGTGcc                >  1:394895/1‑150 (MQ=255)

                                                                                                                                        ccATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAATCGATGGTTTGCGGTCAGTGCCa               >  2:257906/1‑150 (MQ=255)

                                                                                                                                         cATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAATCGATGGTTTGCGGTCAGTGCCAt              >  1:418694/1‑150 (MQ=255)

                                                                                                                                          aTAACACCGCCTCTCCAGAGTTTGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAATCGATGGTTTGCGGTCAGTGCCAtg             >  2:1532104/1‑150 (MQ=255)

                                                                                                                                           tAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAATCGATGGTTTGCGGTCAGTGCCAtgt            >  1:575906/1‑150 (MQ=255)

                                                                                                                                             acacCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAATCGATGGTTTGCGGTCAGTGCCATGTgg          <  1:1011863/150‑1 (MQ=255)

                                                                                                                                             acacCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAATCGATGGTTTGCGGTCAGTGCCATGTgg          <  2:929003/150‑1 (MQ=255)

                                                                                                                                               accgccTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAATCGATGGTTTGCGGTCAGTGCCATGTGGAg        >  2:993913‑M2/7‑150 (MQ=255)

                                                                                                                                                ccgccTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGATCAGCAATCGATGGTTTGCGGTCAGTGCCATGTGGAGt       >  2:1230688‑M2/6‑150 (MQ=255)

                                                                                                                                                ccgccTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAATCGATGGTTTGCGGTCAGTGCCATGTGGAGt       >  2:650513‑M2/6‑150 (MQ=255)

                                                                                                                                                   ccTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAATCGATGGTTTGCGGTCAGTGCCATGTGGAGTAtt    <  1:226783‑M2/148‑1 (MQ=255)

                                                                                                                                                     tctcCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAATCGATGGTTTGCGGTCAGTGCCATGTGGAGTATTAc  <  1:187489/150‑1 (MQ=255)

TACCGATGGCATGCTGGAGTTGTAAAAGCCCGGATGTGGCGCGTCTGATCCAGAAAGACGGCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAATCGATGGTTTGCGGTCAGTGCCATGTGGAGTATTAC  >  NC_000913/4288116‑4288414

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.