| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,378,285 | T→A | 7.8% | K123* (AAA→TAA) ‡ | rplM ← | 50S ribosomal subunit protein L13 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,378,285 | 0 | T | A | 7.8% | 346.9 / 14.9 | 115 | K123* (AAA→TAA) ‡ | rplM | 50S ribosomal subunit protein L13 |
| Reads supporting (aligned to +/- strand): ref base T (54/52); new base A (2/7); total (56/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.64e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.49e-01 | |||||||||||
Only 100 of 117 total aligned reads displayed.
GCCCGGTTTGATGAAAACGCGAGCTGCGGAACTTTTGCGGCGACCAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGTGTGGTGATAGTACA > NC_000913/3378136‑3378434 | gCCCGGTTTGATGAAAACGCGAGCTGCGGAACTTTTGCGGCGACCAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACttt > 2:519070/1‑150 (MQ=255) cccGGTTTGATGAAAACGCGAGCTGCGGAACTTTTGCGGCGACCAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTc > 1:1339972/1‑150 (MQ=255) tttGATGAAAACGCGAGCTGCGGAACTTTTGCGGCGACCAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGttt > 1:1239688/1‑150 (MQ=255) ttGATGAAAACGCGAGCTGCGGAACTTTTGCGGCGACCAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTa < 1:228796/150‑1 (MQ=255) ttGATGAAAACGCGAGCTGCGGAACTTTTGCGGCGACCAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTa > 2:680601/1‑150 (MQ=255) ttGATGAAAACGCGAGCTGCGGAACTTTTGCGGCGACCAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTGAAAGTTTa < 2:577341/150‑1 (MQ=255) gatgaAAACGCGAGCTGCGGAACTTTTGCGGCGACCAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACg > 1:616498/1‑150 (MQ=255) atgaAAACGCGAGCTGCGGAACTTTTGCGGCGACCAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACgg < 2:1175995/150‑1 (MQ=255) atgaAAACGCGAGCTGCGGAACTTTTGCGGCGACCAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTGAAAGTTTACgc < 1:830752/150‑2 (MQ=255) gaAAACGCGAGCTGCGGAACTTTTGCGGCGACCAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGaa > 2:917433/1‑150 (MQ=255) gaAAACGCGAGCTGCGGAACTTTTGCGGCGACCAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGaa < 2:195969/150‑1 (MQ=255) gaAAACGCGAGCTGCGGAACTTTTGCGGCGACCAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGaa > 1:1447437/1‑150 (MQ=255) aaaaCGCGAGCTGCGGAACTTTTGCGGCGACCAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTGAAAGTTTACgcggg < 1:760575/150‑5 (MQ=255) aaaaCGCGAGCTGCGGAACTTTTGCGGCGACCAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTGAAAGTTTACgcggg < 1:754894/150‑5 (MQ=255) aaaCGCGAGCTGCGGAACTTTTGCGGCGACCAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACa > 1:255353/1‑150 (MQ=255) gcgAGCTGCGGAACTTTTGCGGCGACCAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGc < 2:61106/150‑1 (MQ=255) gcgAGCTGCGGAACTTTTGCGGCGACCAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGc < 1:680601/150‑1 (MQ=255) cgAGCTGCGGAACTTTTGCGGCGACCAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCa > 1:905469/1‑150 (MQ=255) cTGCGGAACTTTTGCGGCGACCAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGAc < 2:1338171/150‑1 (MQ=255) cGGAACTTTTGCGGCGACCAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCa > 2:409029/1‑150 (MQ=255) cGGAACTTTTGCGGCGACCAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCa > 2:312637/1‑150 (MQ=255) ggAACTTTTGCGGCGACCAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAg > 1:1446483/1‑150 (MQ=255) gAACTTTTGCGGCGACCAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGc < 2:84064/150‑1 (MQ=255) gAACTTTTGCGGCGACCAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGc < 2:1204737/150‑1 (MQ=255) aCTTTTGCGGCGACCAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCgg < 2:1339972/150‑1 (MQ=255) aCTTTTGCGGCGACCAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCgg < 2:953226/150‑1 (MQ=255) cTTTTGCGGCGACCAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCggg < 2:616498/150‑1 (MQ=255) gcggcgACCAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCttt < 2:447896/150‑1 (MQ=255) ggcgACCAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTg < 1:1398832/150‑1 (MQ=255) ggcgACCAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTg > 2:1537769/1‑150 (MQ=255) gcgACCAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTgg < 1:1091755/150‑1 (MQ=255) ccAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAAc < 2:1260702/150‑1 (MQ=255) cAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACa > 1:1056583/1‑150 (MQ=255) aGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACAt > 1:1432406/1‑150 (MQ=255) aGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACAt > 1:1427253/1‑150 (MQ=255) tGCCGTAGTATTGATTTTCAGCCATTGCGTATAATCCGGATTAGATGTCAAGAACTTGCGGTGGCTGTGCCGCGTGGTTGTGCTCGTTAGCCGCGTTAACTTTCTGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGc < 1:1165867/150‑1 (MQ=255) gCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGcc > 2:568545/1‑150 (MQ=255) ccGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCt < 2:632752/150‑1 (MQ=255) cGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCtt < 1:519070/150‑1 (MQ=255) agtaTTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTaa > 2:1023988/1‑150 (MQ=255) taTTGATTTTCAGCCATTGCCTCTAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGc < 2:1494750/113‑1 (MQ=255) taTTGATTTTCAGCCATTGCCTCTAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGc > 1:1494750/1‑113 (MQ=255) aTTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGTCTTTAACcg > 2:1066607/1‑150 (MQ=255) aTTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACcg > 1:1078333/1‑150 (MQ=255) ttGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACcgc > 1:1498316/1‑150 (MQ=255) tGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGGTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGGCCCAGCGGGCCTTTTGGCAACATGCCTTTAACcgcg < 1:129449/150‑1 (MQ=255) gATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGa < 1:736601/150‑1 (MQ=255) ttCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTc < 2:317404/150‑1 (MQ=255) gCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGc > 1:960926/1‑150 (MQ=255) ccTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCt > 1:334709/1‑150 (MQ=255) cTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGACTTTAACCGCGATTTCAATCACACGCTc > 1:22566/1‑150 (MQ=255) tataATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCa < 2:1446483/150‑1 (MQ=255) tataATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCa > 1:325713/1‑150 (MQ=255) tataATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGCTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACACAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCa > 2:372860/1‑150 (MQ=255) aTCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATcaca > 2:979195/1‑140 (MQ=255) aTCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATcaca < 1:979195/140‑1 (MQ=255) cccGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACgg > 1:1303996/1‑150 (MQ=255) cGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCg > 1:1120064/1‑150 (MQ=255) cGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCg < 2:145536/150‑1 (MQ=255) tAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCa < 2:901575/150‑1 (MQ=255) aTGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACGTAGCGGGTGTTTTGGCTACATGCCTTTTACCGAGATTTCAATAATACGCTCAGGAAGGAGTGTAatc < 2:1514653/150‑1 (MQ=255) tGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAatca < 1:399358/150‑1 (MQ=255) gTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAAt > 2:698321/1‑123 (MQ=255) gTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAAt < 1:698321/123‑1 (MQ=255) tCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCACCATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAatcagc > 2:800891/1‑148 (MQ=255) aGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATctct > 2:513772/1‑150 (MQ=255) aGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATctct < 1:556898/150‑1 (MQ=255) gAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGTCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCtt < 1:1066607/150‑1 (MQ=255) aCTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCa > 2:285336/1‑150 (MQ=255) cTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCaa > 2:1404478/1‑150 (MQ=255) ggTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTc > 1:360656/1‑150 (MQ=255) gTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCg > 2:770503/1‑150 (MQ=255) gTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCg > 1:366101/1‑150 (MQ=255) ttGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGc < 1:497163/150‑1 (MQ=255) ttGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGc < 2:905469/150‑1 (MQ=255) gCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTg < 1:1174066/150‑1 (MQ=255) gCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTg > 1:1237005/1‑150 (MQ=255) gCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTg < 1:568545/150‑1 (MQ=255) ggcgTGGGTTTGCTGGTTAAGCGCGTAAACTTTCAGTTTACTGAACATAGCACGACCGAGCGGGCCTTTTGGCAACATTCTTTTAACCGCGATTTCAATCACACGCTCAGGAATGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGAt < 2:1293709/149‑1 (MQ=255) cgcgTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGAt < 2:255353/150‑1 (MQ=255) gTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATaccacc > 1:1025393/1‑150 (MQ=255) tgCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGAtg > 2:1383781/1‑150 (MQ=255) tgCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGAtg < 1:1292648/150‑1 (MQ=255) tgCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGAtg < 1:1037614/150‑1 (MQ=255) ggCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACTACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGAtg < 2:548226/149‑1 (MQ=255) gCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCAtctc > 1:273837/1‑118 (MQ=255) gCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCAtctc < 2:273837/118‑1 (MQ=255) tACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCGTTTTGGCAACATTCCTTTAAGCGCGATTTGAATCACACGCTCTGGACGGCGAGCTATCTTCTGTTGAAATGTCGGTTGTTTGTTAGCTCTGATGTGGCCgg < 2:45135/150‑1 (MQ=255) tACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCgg > 1:1334191/1‑150 (MQ=255) tACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCgg < 2:713999/150‑1 (MQ=255) cccTCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGgtg < 2:1239688/150‑1 (MQ=255) cccGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGgtg > 2:1108395/1‑150 (MQ=255) ttccgTAAACTGAAAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATa < 1:1292713/128‑1 (MQ=255) ttccgTAAACTGAAAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATa > 2:1292713/4‑131 (MQ=255) gcgTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGTgtgg > 1:651364/1‑150 (MQ=255) gcgTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGTgtgg < 1:541928/150‑1 (MQ=255) cgTAAACTGAAAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGTgtggt > 2:1446931/1‑150 (MQ=255) aaaCTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGTGTGGTGAt < 1:917433/150‑1 (MQ=255) aaCTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGTGTGGTGATa < 1:1404478/150‑1 (MQ=255) tCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGTGTGGTGATAGTaca < 1:1023988/150‑1 (MQ=255) | GCCCGGTTTGATGAAAACGCGAGCTGCGGAACTTTTGCGGCGACCAGTGCCGTAGTATTGATTTTCAGCCATTGCCTATAATCCCGATTAGATGTCAAGAACTTGCGGTTGCTGTGCCGCGTGGTTGTGCTCGTTACCCGCGTAAACTTTCAGTTTACGGAACATAGCACGACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGTGTGGTGATAGTACA > NC_000913/3378136‑3378434 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |