| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,477,340 | T→G | 5.6% | E27A (GAA→GCA) ‡ | fkpA ← | peptidyl‑prolyl cis‑trans isomerase FkpA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,477,340 | 0 | T | G | 5.6% | 402.7 / 12.9 | 126 | E27A (GAA→GCA) ‡ | fkpA | peptidyl‑prolyl cis‑trans isomerase FkpA |
| Reads supporting (aligned to +/- strand): ref base T (56/63); new base G (2/5); total (58/68) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.51e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.62e-01 | |||||||||||
Only 100 of 130 total aligned reads displayed.
CTTTATCCAGTTTGATGCCCAGTTTTTCTTGTTCTTTTAGAGAGTTTTCCATGTAACGACCCAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCGGGGCATCTCACCCCAGGGTTAACTATTATCAGAAGGGTACTATAAAGCGTTG > NC_000913/3477191‑3477488 | cTTTATCCAGTTTGATGCCCAGTTTTTCTTGTTCTTTTAGAGAGTTTTCCATGTAACGACCCAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCtt > 2:1537027/1‑150 (MQ=255) aTCCAGTTTGATGCCGACTTTTTCTTGTTCTTTTTGAGAGTTTTCCATGTAACGACCCAGCGAGGCACCCTGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTcagc < 2:1022242/150‑1 (MQ=255) ccAGTTTGATGCCCAGTTTTTCTTGTTCTTTTAGAGAGTTTTCCATGTAACGACCCAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTcagcag > 2:282823/1‑150 (MQ=255) aTGCCCAGTTTTTCTTGTTCTTTTAGAGAGTTTTCCATGTAACGACCCAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCTGCTGAAGCTGCaaaacct < 1:1260888/150‑4 (MQ=255) tGCCCAGTTTTTCTTGTTCTTTTAGAGAGTTTTCCATGTAACGACCCAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCTGCTGAAGCTGCaaaacctg < 1:908368/150‑5 (MQ=255) cccAGTTTTTCTTGTTCTTTTAGAGAGTTTTCCATGTAACGACCCAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCTGCTGAAGCTGCaaaacctgct < 1:1456114/150‑7 (MQ=255) cccAGTTTTTCTTGTTCTTTTAGAGAGTTTTCCATGTAACGACCCAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGAtt > 2:1466299/1‑150 (MQ=255) cccAGTTTTTCTTGTTCTTTTAGAGAGTTTTCCATGTAACGACCCAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGAtt > 2:629278/1‑150 (MQ=255) gTTTTTCTTGTTCTTTTAGAGAGTTTTCCATGTAACGACCCAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGtg < 2:1334702/150‑1 (MQ=255) tttttCTTGTTCTTTTAGAGAGTTTTCCATGTAACGACCCAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGtgc < 1:56229/150‑1 (MQ=255) ttttCTTGTTCTTTTAGAGAGTTTTCCATGTAACGACCCAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGtgca < 1:1375805/150‑1 (MQ=255) ttCTTGTTCTTTTAGAGAGTTTTCCATGTAACGACCCAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGtgcatg < 1:1186159/150‑1 (MQ=255) cTTGTTCTTTTAGAGAGTTTTCCATGTAACGACCCAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGtgcatgca < 1:1257519/150‑1 (MQ=255) tGTTCTTTTAGAGAGTTTTCCATGTAACGACCCAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAgg < 1:693982/150‑1 (MQ=255) gTTCTTTTAGAGAGTTTTCCATGTAACGACCCAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCGGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAggg < 2:378961/150‑1 (MQ=255) ttCTTTTAGAGAGTTTTCCATGTAACGACCCAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGc < 1:282823/150‑1 (MQ=255) cTTTTAGAGAGTTTTCCATGTAACGACCCAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCaa > 2:393701/1‑150 (MQ=255) cTTTTAGAGAGTTTTCCATGTAACGACCCAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCaa > 2:1385276/1‑150 (MQ=255) cTTTTAGAGAGTTTTCCATGTAACGACCCAGCGAGGCACCCAGTGCAAAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTTTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAACTGATTTGTGCATGCAGGGCaa > 2:603918/1‑150 (MQ=255) ttAGAGAGTTTTCCATGTAACGACCCAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACgg < 2:435511/150‑1 (MQ=255) tAGAGAGTTTTCCATGTAACGACCCAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGc < 1:896298/150‑1 (MQ=255) tAGAGAGTTTTCCATGTAACGACCCAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGc < 1:607307/150‑1 (MQ=255) tAGAGAGTTTTCCATGTAACGACCCAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGc < 2:83531/150‑1 (MQ=255) gagTTTTCCATGTAACGACCCAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCAtt > 2:1310098/1‑150 (MQ=255) gagTTTTCCATGTAACGACCCAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCAtt > 2:676771/1‑150 (MQ=255) gTTTTCCATGTAACGACCCAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATtgt < 1:1007864/150‑1 (MQ=255) ccATGTAACGACCCAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCg < 1:158720/150‑1 (MQ=255) ccATGTAACGACCCAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCg > 1:1264405/1‑150 (MQ=255) cATGTAACGACCCAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGc > 1:177901/1‑150 (MQ=255) aaCGACCCAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCcagcc > 1:420914/1‑149 (MQ=255) cGACCCAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCagcagc > 1:80778/1‑150 (MQ=255) gACCCAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCACCGGCCATTGTGGTCGCCAGCAGCg > 2:898456/1‑150 (MQ=255) aCCCAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGt > 1:859391/1‑150 (MQ=255) cccAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGtt > 1:232813/1‑150 (MQ=255) cccAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGtt < 1:1249011/150‑1 (MQ=255) cccAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGtt > 1:777261/1‑150 (MQ=255) cAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTAc < 1:930955/150‑1 (MQ=255) aGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACt > 2:976411/1‑150 (MQ=255) gCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACtt < 2:859391/150‑1 (MQ=255) cGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACttt > 1:752399/1‑150 (MQ=255) gCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAAc < 1:1310098/150‑1 (MQ=255) gCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAAc < 2:1503630/150‑1 (MQ=255) cccAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGt > 2:900982/1‑150 (MQ=255) cccAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGt < 1:1466348/150‑1 (MQ=255) ccAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGGTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTTCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTg < 2:456940/150‑1 (MQ=255) ccAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTg < 2:1487454/150‑1 (MQ=255) ccAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTg < 2:938476/150‑1 (MQ=255) cAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTgg > 2:478310/1‑122 (MQ=255) cAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTgg < 1:478310/122‑1 (MQ=255) gCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCcag > 1:1090246/1‑125 (MQ=255) gCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCcag < 2:1090246/125‑1 (MQ=255) gCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTc > 2:758214/1‑150 (MQ=255) cATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCa > 2:267078/1‑150 (MQ=255) aTAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCAt < 2:1015754/150‑1 (MQ=255) aaGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATcc < 2:205453/150‑1 (MQ=255) aaGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATcc < 2:1264405/150‑1 (MQ=255) aaGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATcc > 1:1334756/1‑150 (MQ=255) cTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCata > 1:425694/1‑150 (MQ=255) cTGATTACTCATCGTCATATTTAAACGCTGCTTTGATGTAAGCAGCTGTAGCAGGTTTTGAAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCata > 2:1221414/1‑150 (MQ=255) tGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCatat > 2:36720/1‑150 (MQ=255) tGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCatat > 1:22465/1‑150 (MQ=255) gATGTCTGATCGTCATTTTTGAACGCTGCTTTGCTGGCAGCAGCGGGAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCCACGGCCATTGTGGGCGCCCGCAGCGTTACTTTAAACAGTGATGTCATCCATAtc > 2:1061148/1‑150 (MQ=255) tCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCa < 1:1040843/150‑1 (MQ=255) cTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAg < 2:535490/150‑1 (MQ=255) aTCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGAt < 1:393701/150‑1 (MQ=255) tCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATc < 2:80778/150‑1 (MQ=255) cGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCg < 1:1385276/150‑1 (MQ=255) cGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCg > 1:111054/1‑150 (MQ=255) gTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTCCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCgg < 1:1333014/150‑1 (MQ=255) tCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCggg < 2:533127/150‑1 (MQ=255) cATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCgggg < 2:22465/150‑1 (MQ=255) aTTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCGGGGc > 2:1393749/1‑150 (MQ=255) tttttGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCGGGGCa > 1:1495072/1‑150 (MQ=255) aCGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGAttt < 2:1200301/118‑1 (MQ=255) aCGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGAttt > 1:1200301/1‑118 (MQ=255) cGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGTTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCGGGGCATCTCAccc > 1:932832/1‑150 (MQ=255) tttGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCGGGGCATCTCACCCCAGGGt > 2:196752/1‑150 (MQ=255) tGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCGGGGCATCTCACCCCAGGGTTa > 2:1120867/1‑150 (MQ=255) cTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCGGGGCATCTCACCCCAGGGTTAAc > 1:309645/1‑150 (MQ=255) tGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCGGGGCATCTCACCCCAGGGTTAAca < 2:791946/150‑2 (MQ=255) tGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCGGGGCATCTCACCCCAGGGTTAACt > 2:874006/1‑150 (MQ=255) gTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCGGGGCATCTCACCCCAGGGTTAACta > 1:763359/1‑150 (MQ=255) cagcagCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCGGGGCATCTCACCCCAGGGTTAACtatt > 2:935653/1‑150 (MQ=255) gcagcTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCGGGGCATCTCACCCCAGGGTTAACtattat > 1:874714/1‑150 (MQ=255) gcagcTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCAACCATATCTCCAGGATCGGGGCATCTCACCCCAGGGTTAACtattat < 1:1138679/150‑1 (MQ=255) cagcTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCGGGGCATCTCACCCCAGGGTTAACTATTATc < 1:629278/150‑1 (MQ=255) gcTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCGGGGCATCTCACCCCAGGGTTAACTATTATCAg < 2:1289493/150‑1 (MQ=255) gTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCGGGGCATCTCACCCCAGGGTTAACTATTATCAGAAg < 1:1112184/150‑1 (MQ=255) gTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCGGGGCATCTCACCCCAGGGTTAACTATTATCAGAAg > 1:1160154/1‑150 (MQ=255) aaGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCGGGGCATCTCACCCCAGGGTTAACTATTATCAGAAgg < 1:293265/149‑1 (MQ=255) gCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCGGGGCATCTCACCCCAGGGTTAACTATTATCAGAAGGGt > 1:1000355/1‑150 (MQ=255) cAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCGGGGCATCTCACCCCAGGGTTAACTATTATCAGAAGGGTa > 1:1394186/1‑150 (MQ=255) ggTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCGGGGCATCTCACCCCAGGGTTAACTATTATCAGAAGGGTACt < 2:1394186/150‑1 (MQ=255) gTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCGGGGCATCTCACCCCAGGGTTAACTATTATCAGAAGGGTACta < 2:763359/150‑1 (MQ=255) gTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCGGGGCATCTCACCCCAGGGTTAACTATTATCAGAAGGGTACta < 2:752399/150‑1 (MQ=255) ttGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCTGGATCGGGGCATCTCACCCCAGGGTTAACTATTATCATAAGGGTACTATaa < 1:556439/150‑1 (MQ=255) tGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCGGGGCATCTCACCCCAGGGTTAACTATTATCAGAAGGGTACTATaaa < 1:566041/150‑1 (MQ=255) gCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCGGGGCATCTCACCCCAGGGTTAACTATTATCAGAAGGGTACTATAAAg < 2:1000355/150‑1 (MQ=255) ttCAGCAGCAAAAGTTATTGGTGCATGCAGGGCAAAGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCGGGGCATCTCACCCCAGGGTTAACTATTATCAGAAGGGTACTATAAAGCGTTg < 1:647423/150‑1 (MQ=255) ttCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCGGGGCATCTCACCCCAGGGTTAACTATTATCAGAAGGGTACTATAAAGCGTTg > 1:823821/1‑150 (MQ=255) | CTTTATCCAGTTTGATGCCCAGTTTTTCTTGTTCTTTTAGAGAGTTTTCCATGTAACGACCCAGCGAGGCACCCAGTGCATAAGCTGATTTCTGATCGTCATTTTTGAACGCTGCTTTGCTGTCAGCAGCTGTAGCAGGTTTTGCAGCTTCAGCAGCAAAAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCGGGGCATCTCACCCCAGGGTTAACTATTATCAGAAGGGTACTATAAAGCGTTG > NC_000913/3477191‑3477488 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |