| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,980,112 | C→A | 5.1% | S120S (TCC→TCA) ‡ | uspC → | universal stress protein C |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,980,112 | 0 | C | A | 5.1% | 261.8 / 2.5 | 78 | S120S (TCC→TCA) ‡ | uspC | universal stress protein C |
| Reads supporting (aligned to +/- strand): ref base C (29/45); new base A (2/2); total (31/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.34e-01 | |||||||||||
AAGTTAATTCAGGATGCGGGGTATCCCGTTGACAAGACGTTTATTGCCTACGGTGAGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTA > NC_000913/1979963‑1980261 | aaGTTAATTCAGGATGCGGGGTATCCCGTTGACAAGACGTTTATTGCCTACGGTGAGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATcc > 2:1187113/1‑150 (MQ=255) aGTTAATTCAGGATGCGGGGTATCCCGTTGACAAGACGTTTATTGCCTACGGTGAGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCt > 2:759336/1‑150 (MQ=255) cAGGATGCGGGGTATCCCGTTGACAAGACGTTTATTGCCTACGGTGAGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCg < 2:1512525/150‑1 (MQ=255) gATGCGGGGTATCCCGTTGACAAGACGTTTATTGCCTACGGTGAGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGaaa < 2:1335161/150‑1 (MQ=255) ggggTATCCCGTTGACAAGACGTTTATTGCCTACGGTGAGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGt < 2:1140845/150‑1 (MQ=255) gggTATCCCGTTGACAAGACGTTTATTGCCTACGGTGAGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGtt < 1:1230744/150‑1 (MQ=255) aTCCCGTTGACAAGACGTTTATTGCCTACGGTGAGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTg < 1:1167051/150‑1 (MQ=255) cccGTTGACAAGACGTTTATTGCCTACGGTGAGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGcc < 2:649632/150‑1 (MQ=255) cGTTGACAAGACGTTTATTGCCTACGGTGAGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTc > 1:1203681/1‑150 (MQ=255) gTTGACAAGACGTTTATTGCCTACGGTGAGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCa < 2:1170411/150‑1 (MQ=255) tGACAAGACGTTTATTGCCTACGGTGAGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAg < 1:1482055/150‑1 (MQ=255) aCAAGACGTTTATTGCCTACGGTGAGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTg < 2:323225/150‑1 (MQ=255) cAAGACGTTTATTGCCTACGGTGAGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGa < 2:811334/150‑1 (MQ=255) cAAGACGTTTATTGCCTACGGCGAGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGa < 1:1378634/150‑1 (MQ=255) aaGACGTTTATTGCCTACGGTGAGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAg < 1:1497764/150‑1 (MQ=255) aGACGTTTATTGCCTACGGTGAGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAgg > 1:920776/1‑150 (MQ=255) aGACGTTTATTGCCTACGGTGAGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAgg < 1:1177933/150‑1 (MQ=255) ttATTGCCTACGGTGAGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGAtg < 1:405901/150‑1 (MQ=255) ttGCCTACGGTGAGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGc < 2:355045/150‑1 (MQ=255) gCCTACGGTGAGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTg > 1:775612/1‑150 (MQ=255) gCCTACGGTGAGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTg > 2:1100862/1‑150 (MQ=255) atACTGTGAGTTAAGCTAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTTATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCTAAAATAGTTATTGCCTCAAGTGAGGTCGATGTGCTGtt < 1:540262/149‑1 (MQ=255) tACGGTGAGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAag < 2:1466178/116‑1 (MQ=255) tACGGTGAGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAag > 1:1466178/1‑116 (MQ=255) aCGGTGAGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAg > 2:624593/1‑150 (MQ=255) ggTGAGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGtt < 2:342813/150‑1 (MQ=255) gAGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCa < 2:351753/150‑1 (MQ=255) gAGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCAGCGAAAAGAGTTATTGCCTCAGGTGAGGTCGATGTGCTGTTAGTTCCa < 2:1400464/150‑1 (MQ=255) aGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCAc < 1:812965/150‑1 (MQ=255) aGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAAGCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCAc < 2:949002/150‑1 (MQ=255) aaGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCTCAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTAc < 1:422553/150‑1 (MQ=255) aaGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTAc < 1:665846/150‑1 (MQ=255) atTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTaa > 2:1044092/1‑150 (MQ=255) ttCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAAc < 2:1535259/150‑1 (MQ=255) tCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAAcc < 2:1026806/150‑1 (MQ=255) gAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTc < 1:759336/150‑1 (MQ=255) gTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTa < 1:1065501/150‑1 (MQ=255) aTGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACg > 1:1246626/1‑150 (MQ=255) aTGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACg < 1:1193933/150‑1 (MQ=255) gTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCa < 2:775612/150‑1 (MQ=255) tCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCaa < 1:1111577/150‑1 (MQ=255) tCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCaa > 1:1305459/1‑150 (MQ=255) aGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGAtg > 2:533096/1‑102 (MQ=255) aGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGAtg < 1:533096/102‑1 (MQ=255) tcatTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGaa < 1:353583/150‑1 (MQ=255) catTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGaaa > 2:1104611/1‑150 (MQ=255) catTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGaaa > 1:762863/1‑150 (MQ=255) atTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAg < 1:890232/150‑1 (MQ=255) atTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAg > 2:1441279/1‑150 (MQ=255) ttCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGt < 2:1059666/150‑1 (MQ=255) tCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTa < 1:122186/150‑1 (MQ=255) cGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAg > 1:1106850/1‑150 (MQ=255) gATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGc < 2:1203681/150‑1 (MQ=255) aTTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGCa > 2:1329037/1‑150 (MQ=255) tGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTa > 2:793140/1‑150 (MQ=255) aTTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTATc > 2:1523358/1‑150 (MQ=255) tttGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTATcg < 2:617346/150‑1 (MQ=255) ttGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTATcgc > 1:1271361/1‑150 (MQ=255) cGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCgct > 2:464177/1‑150 (MQ=255) ggTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTACCCGCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCgctg > 2:96705/1‑150 (MQ=255) aatcacaatcacAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCGctgctg < 1:1370207/150‑1 (MQ=255) cacaatcacaGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCt > 1:340446/1‑150 (MQ=255) cacaatcacaGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCt > 2:789885/1‑150 (MQ=255) caatcacaGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCttt > 2:839777/1‑150 (MQ=255) atcacaGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATTTTCTTTTAGTTCCAGTTAAGGTAGATTAACCTCTCCTAATCAATCTTTTTAAATTTAGGAAGTTTATCGAGATGATGGCTTTcg < 2:814606/150‑2 (MQ=255) atcacaGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTcc > 1:548479/1‑150 (MQ=255) actCTTTTCGCCGAGCAGGATGCTC‑GCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTc > 1:1146419/3‑150 (MQ=255) actCTTTTCGCCGAGCAGGATGCTC‑GCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTc < 2:456887/148‑1 (MQ=255) tCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTcgc > 1:32753/1‑150 (MQ=255) cTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCgctgct > 1:1156543/1‑132 (MQ=255) cTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCgctgct < 2:1156543/132‑1 (MQ=255) ttttCGCCGAGCAGGATGCTC‑GCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGt > 1:499089/1‑111 (MQ=38) ttttCGCCGAGCAGGATGCTC‑GCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGt < 2:499089/111‑1 (MQ=38) tCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAAc < 1:1329037/150‑1 (MQ=255) cg‑cgAGCATCCCGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGAAGCGCGGaaag < 2:1097816/150‑3 (MQ=255) cgAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTAt > 1:1163835/1‑150 (MQ=255) gggCATACTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTACACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGTAAGGTAGCAACATTATCGCGCTTCTTGCTTTCCGCGCATCGCGGAACTAta > 1:1362163/3‑149 (MQ=255) gCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGAAGCGCGGaaagccagc < 1:793140/150‑8 (MQ=255) aTCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCt < 1:1405683/150‑1 (MQ=255) gcTGCTCGGCGAAAAGAGTTATTGCCTCTTGTGTGGTGGATGTGCTGTTAGTTGCACTTAGGGGAGATTAACCGCTCCTACGCAATGTTTGGAAAGGTAGCAACTTTATCGCGCTGGTGGGTTTCGGCGCTTCGCGGAACTATCTGCttt < 2:880922/149‑1 (MQ=255) ccTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCttt > 2:1318159/1‑150 (MQ=255) ccTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCATACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCttt > 2:1323406/1‑150 (MQ=255) cTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTa < 2:762863/150‑1 (MQ=255) | AAGTTAATTCAGGATGCGGGGTATCCCGTTGACAAGACGTTTATTGCCTACGGTGAGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCG‑CGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTA > NC_000913/1979963‑1980261 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |