| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,106,959 | A→T | 5.3% | Y90N (TAT→AAT) | wbbH ← | putative O‑antigen polymerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,106,959 | 0 | A | T | 5.3% | 514.6 / 13.7 | 170 | Y90N (TAT→AAT) | wbbH | putative O‑antigen polymerase |
| Reads supporting (aligned to +/- strand): ref base A (77/84); new base T (6/3); total (83/87) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.21e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.93e-01 | |||||||||||
Only 100 of 175 total aligned reads displayed.
CTTCAACATCAGCATCTCTTATCAAATTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGACGTTATTTCATATC > NC_000913/2106812‑2107108 | cTTCAACATCAGCATCTCTTATCAAATTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATaaa > 2:1481249/1‑150 (MQ=255)cTTCAACATCAGCATCTCTTATCAAATTCATATAGCTAAGTAAGCTAGTCCCGAAATGGTAGATACTTAACCTCATGCATATATATATCAAAGAAAAAGAAATAACTAACAAGCCAACATTATGAACTTTCTTAGATGGTATGCTATaaa > 2:323527/1‑150 (MQ=255) ttCAACATCAGCATCTCTTATCAAATTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAAt < 2:9240/150‑1 (MQ=255) ttCAACATCAGCATCTCTTATCAAATTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAAt > 2:345400/1‑150 (MQ=255) ttCAACATCAGCATCTCTTATCAAATTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAAt < 1:1269454/150‑1 (MQ=255) ttCAACATCAGCATCTCTTATCAAATTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAAt < 1:386124/150‑1 (MQ=255) tCAACATCAGCATCTCTTATCAAATTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATa > 1:804897/1‑150 (MQ=255) tCAACATCAGCATCTCTTATCAAATTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATa < 1:1380754/150‑1 (MQ=255) aCATCAGCATCTCTTATCAAATTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCa > 2:824750/1‑150 (MQ=255) aCATCAGCATCTCTTATCAAATTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCa > 1:700921/1‑150 (MQ=255) tCAGCATCTCTTATCAAATTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATTTATAGCatac < 1:434771/150‑3 (MQ=255) aGCATCTCTTATCAAATTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCattatt > 1:1077210/1‑150 (MQ=255) gCATCTCTTATCAAATTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTg > 1:1181625/1‑150 (MQ=255) gCATCTCTTATCAAATTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTg > 2:1287941/1‑150 (MQ=255) aTCTCTTATCAAATTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGAc < 2:771711/150‑1 (MQ=255) tATCAAATTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCt > 2:592691/1‑150 (MQ=255) aTCAAATTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTg < 1:260688/150‑1 (MQ=255) aTTCATATAGCTAAGTAAGTTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATAtt > 2:455265/1‑150 (MQ=255) tCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTa < 1:1451336/150‑1 (MQ=255) tCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTa < 1:150949/150‑1 (MQ=255) cATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAg > 2:556126/1‑150 (MQ=255) atatAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGa > 1:1323719/1‑150 (MQ=255) aGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTa < 1:740311/150‑1 (MQ=255) gCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTaa < 1:496078/150‑1 (MQ=255) cTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAAt < 1:379856/150‑1 (MQ=255) cTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCATACATTATGCACTTTCTTCGATGGTATGCTATAAATAGAATTATTGAATTTTATGATATTTAGATATAAt > 2:209047/1‑150 (MQ=255) agtaagCTAGTCCCGAACTGGTAGTTACTTACCCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTCTGCACTTTCTTCGAAGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGAGCTAATaca < 2:1157522/150‑1 (MQ=255) gtaagCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATacac < 1:404580/150‑1 (MQ=255) taagCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACt > 1:1396960/1‑150 (MQ=255) agCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATAAACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATATAATACACttt > 2:1217472/1‑150 (MQ=255) tCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCa > 1:1474384/1‑150 (MQ=255) tCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCa > 2:649087/1‑150 (MQ=255) tCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCa < 1:1400901/150‑1 (MQ=255) cccGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCaa > 1:659525/1‑150 (MQ=255) cGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATa < 1:1481249/150‑1 (MQ=255) aCTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAAc > 1:1140866/1‑150 (MQ=255) cTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACa < 1:859825/150‑1 (MQ=255) cTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACa < 2:901758/150‑1 (MQ=255) ggTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAATCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATg < 1:323415/150‑1 (MQ=255) ggTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATg > 1:565226/1‑150 (MQ=255) gTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAg > 2:600768/1‑150 (MQ=255) tACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAggg < 2:1203433/150‑1 (MQ=255) aCCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATg > 2:756644/1‑150 (MQ=255) tCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATGTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCa > 2:613426/1‑150 (MQ=255) cATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCaa > 2:1043785/1‑150 (MQ=255) aTGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATAATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCaaa < 1:1038957/150‑1 (MQ=255) tGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCaaaa > 1:1096796/1‑150 (MQ=255) tGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCaaaa < 2:152257/150‑1 (MQ=255) tGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCaaaa > 1:946265/1‑150 (MQ=255) gCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAAc < 2:1277222/150‑1 (MQ=255) gCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAAc < 1:721848/150‑1 (MQ=255) tatatatCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGc > 1:244604/1‑150 (MQ=255) tatatCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCaa < 1:1043785/150‑1 (MQ=255) tatCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAg < 1:301828/150‑1 (MQ=255) catcGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAg > 1:1008665/1‑150 (MQ=255) aaaaaGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGaaaaa > 2:511091/1‑150 (MQ=255) aGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCaa > 1:132278/1‑150 (MQ=255) aGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCaa < 1:511091/150‑1 (MQ=255) gAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAAc < 1:649087/150‑1 (MQ=255) aaTAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGt > 2:419670/1‑150 (MQ=255) aactaacAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGc < 1:761634/150‑1 (MQ=255) taacAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTc < 2:992709/150‑1 (MQ=255) aacAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCa > 1:193319/1‑150 (MQ=255) aacAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCa > 1:844639/1‑150 (MQ=255) acAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCaa < 1:909487/139‑1 (MQ=255) acAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCAt < 1:139939/150‑1 (MQ=255) aaGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCAttt < 2:13960/150‑1 (MQ=255) aaGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCAttt < 1:824750/150‑1 (MQ=255) ccTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAAc < 1:554350/150‑1 (MQ=255) cTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACt > 1:993323/1‑150 (MQ=255) tACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTg < 1:1524927/150‑1 (MQ=255) tATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAg < 1:604428/150‑1 (MQ=255) aTGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGc > 1:356218/1‑150 (MQ=255) tGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCa > 1:63988/1‑150 (MQ=255) cACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCata > 2:19414/1‑150 (MQ=255) cACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCata > 2:1354542/1‑150 (MQ=255) cACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCata > 2:1340602/1‑150 (MQ=255) aCTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCatat < 2:132278/150‑1 (MQ=255) cTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCatata < 1:1287941/150‑1 (MQ=255) cTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCatata < 2:329577/150‑1 (MQ=255) cTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCatata < 2:704873/150‑1 (MQ=255) ttcttcGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCatatata > 2:340604/1‑150 (MQ=255) cttcGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACTTGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCatatatata > 1:818872/1‑149 (MQ=255) tcGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTg < 1:293034/150‑1 (MQ=255) gtcaataaTGCTATTTATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGa > 1:801876/8‑150 (MQ=255) gATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGAc > 1:982148/1‑150 (MQ=255) caataaTGCTATTTATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGACg > 1:1090508/6‑150 (MQ=255) caataaTGCTATTTATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGACg > 1:497173/6‑150 (MQ=255) caataaTGCTATTTATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGACg > 1:1355555/6‑150 (MQ=255) tGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGACGt < 1:419670/150‑1 (MQ=255) tGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGACGt < 2:139403/150‑1 (MQ=255) aataaTGCTATTTATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGACGt > 1:520027/5‑150 (MQ=255) aTGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGACGTTAtt < 1:106900/150‑1 (MQ=255) aTGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGACGTTAtt > 1:723574/1‑150 (MQ=255) tGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGACGTTAttt < 1:209047/150‑1 (MQ=255) tGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGACGTTAttt < 2:1123953/150‑1 (MQ=255) cTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGACGTTATTTCa < 2:659525/150‑1 (MQ=255) cTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGACGTTATTTCa < 2:307804/150‑1 (MQ=255) cTATAAATAGAATTTTTGACTTTTCTGATATTTAGATCTAATACACTTTTCTTCAATAAACATGTCATGGTAAATGTGAAAACATTGCATAGTAGTTAAATCAACGTTGCGTCATTTAAGTGAAATGATTATATATCTTTGGTTATTTCa < 2:580755/150‑1 (MQ=255) aaaTAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGACGTTATTTCATATc > 1:112862/1‑150 (MQ=255) | CTTCAACATCAGCATCTCTTATCAAATTCATATAGCTAAGTAAGCTAGTCCCGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTATGCTATAAATAGCATTATTGACTTTTCTGATATTTAGATCTAATACACTTTCCGTCAATAAACATGACAGGGTAAATGTCAAAACATTGCAAAGTAGAAAAATCAACGTAGCGTCATTTAACTGAAAAGCATATATATCTGACGTTATTTCATATC > NC_000913/2106812‑2107108 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |