mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 173 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4636324 = | 98 (1.120) | 3 (0.040) | 3/262 | NT | 3.2% | coding (318/690 nt) | creB | DNA‑binding transcriptional regulator CreB |
| ? | NC_000913 | 4636375 = | 91 (1.100) | coding (369/690 nt) | creB | DNA‑binding transcriptional regulator CreB | |||||
| * | ? | NC_000913 | = 4631855 | 88 (1.010) | 4 (0.050) | 3/264 | NT | 4.4% | coding (1123/1938 nt) | slt | soluble lytic murein transglycosylase |
| ? | NC_000913 | = 4631875 | 91 (1.090) | coding (1143/1938 nt) | slt | soluble lytic murein transglycosylase | |||||
| * | ? | NC_000913 | 4614738 = | 85 (0.970) | 3 (0.040) | 3/270 | NT | 3.4% | coding (806/864 nt) | yjjW | putative glycyl‑radical enzyme activating enzyme YjjW |
| ? | NC_000913 | 4614806 = | 85 (0.990) | coding (738/864 nt) | yjjW | putative glycyl‑radical enzyme activating enzyme YjjW | |||||
| * | ? | NC_000913 | 4606855 = | 115 (1.320) | 4 (0.050) | 4/266 | NT | 3.3% | coding (846/1032 nt) | rsmC | 16S rRNA m(2)G1207 methyltransferase |
| ? | NC_000913 | 4606896 = | 121 (1.440) | coding (805/1032 nt) | rsmC | 16S rRNA m(2)G1207 methyltransferase | |||||
| * | ? | NC_000913 | = 4541255 | 113 (1.290) | 5 (0.060) | 5/266 | NT | 4.3% | coding (299/603 nt) | fimB | regulator for fimA |
| ? | NC_000913 | = 4541272 | 114 (1.350) | coding (316/603 nt) | fimB | regulator for fimA | |||||
| * | ? | NC_000913 | 4534130 = | 109 (1.250) | 4 (0.050) | 4/256 | NT | 3.8% | intergenic (‑77/+300) | topAI/yjhZ | KpLE2 phage‑like element; toxin of the TopAI‑YjhQ toxin‑antitoxin system, TopA inhibitor/KpLE2 phage‑like element; putative acetyltransferase YjhZ |
| ? | NC_000913 | 4534171 = | 99 (1.220) | intergenic (‑118/+259) | topAI/yjhZ | KpLE2 phage‑like element; toxin of the TopAI‑YjhQ toxin‑antitoxin system, TopA inhibitor/KpLE2 phage‑like element; putative acetyltransferase YjhZ | |||||
| * | ? | NC_000913 | = 4531472 | 83 (0.950) | 4 (0.050) | 3/266 | NT | 4.8% | coding (180/1122 nt) | sgcX | KpLE2 phage‑like element; putative endoglucanase with Zn‑dependent exopeptidase domain |
| ? | NC_000913 | = 4531502 | 80 (0.950) | coding (150/1122 nt) | sgcX | KpLE2 phage‑like element; putative endoglucanase with Zn‑dependent exopeptidase domain | |||||
| * | ? | NC_000913 | = 4513632 | 85 (0.970) | 3 (0.040) | 3/266 | NT | 3.7% | coding (677/903 nt) | fecB | ferric citrate ABC transporter periplasmic binding protein |
| ? | NC_000913 | = 4513719 | 76 (0.900) | coding (590/903 nt) | fecB | ferric citrate ABC transporter periplasmic binding protein | |||||
| * | ? | NC_000913 | = 4481983 | 105 (1.200) | 3 (0.040) | 3/266 | NT | 2.9% | coding (1855/2856 nt) | valS | valine‑‑tRNA ligase |
| ? | NC_000913 | = 4482012 | 101 (1.200) | coding (1826/2856 nt) | valS | valine‑‑tRNA ligase | |||||
| * | ? | NC_000913 | 4481598 = | 91 (1.040) | 3 (0.040) | 3/264 | NT | 3.3% | coding (2240/2856 nt) | valS | valine‑‑tRNA ligase |
| ? | NC_000913 | 4481652 = | 90 (1.080) | coding (2186/2856 nt) | valS | valine‑‑tRNA ligase | |||||