| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,078,297 | Δ1 bp | 5.3% | intergenic (+163/‑278) | yeeW → / → yoeF | CP4‑44 prophage; putative uncharacterized protein YeeW/CP4‑44 prophage; putative uncharacterized protein YoeF |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,078,297 | 0 | C | . | 5.3% | 382.4 / 13.3 | 114 | intergenic (+163/‑278) | yeeW/yoeF | CP4‑44 prophage; putative uncharacterized protein YeeW/CP4‑44 prophage; putative uncharacterized protein YoeF |
| Reads supporting (aligned to +/- strand): ref base C (58/48); new base . (2/4); total (61/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.14e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.43e-01 | |||||||||||
Only 100 of 116 total aligned reads displayed.
AGGGTATAGTGCCATTAACCACAGAAACAGCACTGTTGTCCTGTATTAAGCAGGCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGAGGTGCGTTATGGCCGTTTTAACGATTAGCATTGACC > NC_000913/2078151‑2078446 | aGGGTATAGTGCCATTAACCACAGAAACAGCACTGTTGTCCTGTATTAAGCAGGCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCATATTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTg > 1:555901/1‑150 (MQ=255)aGGGTATAGTGCCATTAACCACAGAAACAGCACTGTTGTCCTGTATTAAGCAGGCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTg < 1:567027/150‑1 (MQ=255) gTGCCATTAACCACAGAAACAGCACTGTTGTCCTGTATTAAGCAGGCAAGAGAAGGTGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑Gc > 1:50474/1‑150 (MQ=255) tGCCATTAACCACAGAAACAGCACTGTTGTCCTGTATTAAGCAGGCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCt > 1:111302/1‑150 (MQ=255) cATTAACCACAGAAACAGCACTGTTGTCCTGTATTAAGCAGGCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGc > 2:946322/1‑150 (MQ=255) cATTAACCACAGAAACAGCACTGTTGTCCTGTATTAAGCAGGCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGc > 2:940555/1‑150 (MQ=255) tAACCACAGAAACAGCACTGTTGTCCTGTATTAAGCAGGCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAG‑CTGTATTCAGGCTGGCGtc < 1:558954/150‑2 (MQ=255) tAACCACAGAAACAGCACTGTTGTCCTGTATTAAGCAGGCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAG‑CTGTATTCAGGCTGGCGtc < 1:567917/150‑2 (MQ=255) tAACCACAGAAACAGCACTGTTGTCCTGTATTAAGCAGGCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAG‑CTGTATTCAGGCTGGCGtc < 2:1572588/150‑2 (MQ=255) aaCCACAGAAACAGCACTGTTGTCCTGTATTAAGCAGGCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGttt > 2:1381559/1‑150 (MQ=255) ccACAGAAACAGCACTGTTGTCCTGTATTAAGCAGGCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAG‑CTGTATTCAGGCTGGCGtcagg < 2:873833/150‑5 (MQ=255) cacaGAAACAGCACTGTTGTCCTGTATTAAGCAGGCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCa < 1:1285239/150‑1 (MQ=255) cacaGAAACAGCACTGTTGTCCTGTATTAAGCAGGCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCa < 1:1312229/150‑1 (MQ=255) aGAAACAGCACTGTTGTCCTGTATTAAGCAGGCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCACCCTGAATACA‑GCTGGCGTTTTCAttt > 1:803236/1‑150 (MQ=255) aGAAACAGCACTGTTGTCCTGTATTAAGCAGGCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCCCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCAttt < 1:841543/150‑1 (MQ=255) gAAACAGCACTGTTGTCCTGTTTTAAGCAGGCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTta < 1:1049196/150‑1 (MQ=255) aaaCAGCACTGTTGTCCTGTATTAAGCAGGCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTtat < 2:908617/150‑1 (MQ=255) aaaCAGCACTGTTGTCCTGTATTAAGCAGGCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTtat < 1:506256/150‑1 (MQ=255) gCACTGTTGTCCTGTATTAAGCAGGCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACa > 2:1550818/1‑150 (MQ=255) gCACTGTTGTCCTGTATTAAGCAGGCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACa > 1:312647/1‑150 (MQ=255) gCACTGTTGTCCTGTATTAAGCACGCAAGAGAAGATGACCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGTACCGGTGAATCTCACTCAACCCGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACa < 2:1356505/150‑1 (MQ=255) cACTGTTGTCCTGTATTAAGCAGGCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAg > 1:1248121/1‑150 (MQ=255) tGTATTAAGCAGGCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAAcc < 1:1381559/150‑1 (MQ=255) tGTATTAAGCAGGCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAAcc > 1:1196785/1‑150 (MQ=255) tATTAAGCAGGCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGa > 1:1390645/1‑150 (MQ=255) aTTAAGCAGGCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGat < 2:1196785/150‑1 (MQ=255) ttAAGCAGGCAAGAGAAGAGGTCCTTACCCTGCGCCAGCTGCAGCGTCTGCACCAGAACCGCGGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCGGGCGGTTTCATTTATAAACAGAAAGGACAACCGata < 2:864110/150‑1 (MQ=255) tAAGCAGGCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGataa > 2:441518/1‑150 (MQ=255) tAAGCAGGCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGataa < 2:1390645/150‑1 (MQ=255) tAAGCAGGCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGataa > 2:79668/1‑150 (MQ=255) aaGCAGGCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGataat > 2:763627/1‑150 (MQ=255) aGGCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATaatg < 2:1624685/150‑1 (MQ=255) aGGCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATaatg < 2:312647/150‑1 (MQ=255) ggCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGATAGGAAAACCGATAATaatgg > 2:1165812/1‑150 (MQ=255) ggCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATaatgg < 1:441518/150‑1 (MQ=255) ggCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATaatgg < 1:813365/150‑1 (MQ=255) agagAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATaatggaatg > 2:1540464/1‑150 (MQ=255) agagAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATaatggaatg > 1:1405328/1‑150 (MQ=255) agagAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATaatggaatg > 1:967098/1‑150 (MQ=255) tCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCAATTATAAACAGAAATGAAAACCGATAATAATGGAATGGACGCCCCGa > 2:1292661/1‑150 (MQ=255) cTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAg > 1:1163803/1‑150 (MQ=255) ccATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAACGGAATGGACGCCCCGACCATGAAGCAACg > 1:574498/1‑150 (MQ=255) cATCTGCAGCTTCTGCACCAGACCCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGAAAATAATGGAATGGACGCCCCGACCATGAAGCAACgg < 2:1365943/150‑1 (MQ=255) cATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACgg < 1:617002/150‑1 (MQ=255) aTCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGt < 1:509160/150‑1 (MQ=255) tCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTa > 2:1041408/1‑150 (MQ=255) tGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAgg > 2:895399/1‑150 (MQ=255) tGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAgg > 2:841760/1‑150 (MQ=255) gCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGa > 2:1495728/1‑150 (MQ=255) cTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATATTGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATAtt < 1:64464/150‑1 (MQ=255) cTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATAtt < 1:79668/150‑1 (MQ=255) tGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTg < 2:1216763/150‑1 (MQ=255) gCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGa > 1:900383/1‑150 (MQ=255) aCCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATa < 1:1495728/150‑1 (MQ=255) ccAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATaa > 1:36401/1‑150 (MQ=255) ccAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATaa > 2:577710/1‑150 (MQ=255) cAGAACCGGTGAATCTCACTCAACAGGCTTCATTTATCCTGACGCCAGACTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACTCCCCGACCATGAAGCAACGGTAGGATATTACTGATaaa < 2:555901/150‑1 (MQ=255) aGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAAc < 1:1265815/150‑1 (MQ=255) aCCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCtt > 1:229347/1‑150 (MQ=255) cGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTcc < 2:50474/150‑1 (MQ=255) ggTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCa > 2:377433/1‑150 (MQ=255) ggTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACAGATAATAATGGAATGGACGCCCCGACCATGAAGCAACCGTAGGATATTACTGATAAACCTTCCa > 2:336494/1‑150 (MQ=255) gTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAg < 1:895399/150‑1 (MQ=255) aTCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGa > 2:818906/1‑150 (MQ=255) aTCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGa < 1:480157/150‑1 (MQ=255) tcactcaACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGAggg > 1:406022/1‑149 (MQ=255) cactcaACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGAGGTg < 2:464683/150‑1 (MQ=255) cactcaACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGAGGTg > 2:959357/1‑150 (MQ=255) actcaACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGAGGTGc < 1:1540464/150‑1 (MQ=255) ctcaACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGAGGTGCg < 1:841760/150‑1 (MQ=255) caACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATTAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATTTTACTGATAAACCTTCCAGTGGAGGTGCGtt > 2:1502539/1‑150 (MQ=255) caACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGAGGTGCGtt > 2:1191935/1‑150 (MQ=255) caACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGAGGTGCGtt > 1:625483/1‑150 (MQ=255) caACAGGCTTCATTTCTCCTGACGCCAGACTGAATACA‑GATGGCGTTTTCATTTATAAACAGAAAGGAAAAGCGATAATAAGGGAATGGACGCCCGGACCATGAAGCAACGGTAGGATATTACTGATAAACATTCGAGTTGATGTGCggt > 2:1030330/1‑148 (MQ=255) caACAGGCTTCATTTCTCCTGACGCAAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGAGGTGCgat > 2:1124259/1‑148 (MQ=255) aaCAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCTATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGAGGTGCGTTa < 1:1550818/150‑1 (MQ=255) ggCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGAGGTGCGTTATGGc > 1:1386429/1‑150 (MQ=255) ggCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGAGGTGCGTTATGGc > 1:753926/1‑150 (MQ=255) cTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAAACGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGAGGTGCGTTATGGCCg > 2:1227359/1‑150 (MQ=255) ttCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGAGGTGCGTTATGGCCGt > 1:1129620/1‑150 (MQ=255) cATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGAGGTGCGTTATGGCCGttt < 2:309231/150‑1 (MQ=255) cATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGAGGTGCGTTATGGCCGttt > 1:1442382/1‑150 (MQ=255) cATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGAGGTGCGTTATGGCCGttt < 2:682321/150‑1 (MQ=255) cATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAACGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGAGGTGCGTTATGGCCGttt < 2:574498/150‑1 (MQ=255) tctcCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGAGGTGCGTTATGGCCGTTTTAAc < 1:47956/150‑1 (MQ=255) aatgaaaaCGCCAG‑CTGTATTCAGGCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGAGGTGCGTTATGGCCGTTTTAAc > 2:1203640/8‑150 (MQ=255) ctcCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGAGGTGCGTTATGGCCGTTTTAACg < 1:1041408/150‑1 (MQ=255) tgaaaaCGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGAGGTGCGTTATGGCCGTGTTAACGa > 1:517274/6‑150 (MQ=255) tgaaaaCGCCAG‑CTGTATTCAGGCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGAGGTGCGTTATGGCCGTTTTAACGa > 2:1009537/6‑150 (MQ=255) ccTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGAGGTGCGTTATGGCCGTTTTAACGAt > 2:887893/1‑150 (MQ=255) ccTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGAGGTGCGTTATGGCCGTTTTAACGAt > 1:1022546/1‑150 (MQ=255) cTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGAGGTGCGTTATGGCCGTTTTAACGAtt < 1:763627/150‑1 (MQ=255) gACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGAGGTGCGTTATGGCCGTTTTAACGATTAg < 1:56728/150‑1 (MQ=255) aCGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGAGGTGCGTTATGGCCGTTTTAACGATTAGc > 1:179654/1‑150 (MQ=255) cGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGAGGTGCGTTATGGCCGTTTTAACGATTAGCa > 1:723828/1‑150 (MQ=255) gCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTTCAGTGGAGGTGCGTTATGGCCGTTTTAACGATTAGCAt > 2:678980/1‑150 (MQ=255) cAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGTAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGAGGTGCGTTATGGCCGTTTTAACGATTAGCATTg < 2:1442382/150‑1 (MQ=255) gCCTGGATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGAGGTGCGTTATGGCCGTTTTAACGATTAGCATTGAc > 1:1005769/1‑150 (MQ=255) gCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGAGGTGCGTTATGGCCGTTTTAACGATTAGCATTGAc < 2:36401/150‑1 (MQ=255) ccTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGAGGTGCGTTATGGCCGTTTTAACGATTAGCATTGAcc < 1:818906/150‑1 (MQ=255) | AGGGTATAGTGCCATTAACCACAGAAACAGCACTGTTGTCCTGTATTAAGCAGGCAAGAGAAGATGTCCTTACCCTGCGCCATCTGCAGCTTCTGCACCAGAACCGGTGAATCTCACTCAACAGGCTTCATTTCTCCTGACGCCAGCCTGAATACA‑GCTGGCGTTTTCATTTATAAACAGAAAGGAAAACCGATAATAATGGAATGGACGCCCCGACCATGAAGCAACGGTAGGATATTACTGATAAACCTTCCAGTGGAGGTGCGTTATGGCCGTTTTAACGATTAGCATTGACC > NC_000913/2078151‑2078446 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |