New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	404786 =	92 (1.000)	6 (0.070)	5/258	NT	6.9%	coding (1084/1116 nt)	dgcC	diguanylate cyclase DgcC
	?	NC_000913	404827 =	76 (0.880)					intergenic (+9/+8)	dgcC/proC	diguanylate cyclase DgcC/pyrroline‑5‑carboxylate reductase

CCACCATTGAAGCGGTACGCGTACTGGAAGAGAAAGGCTTCCGTGCTGCAGTGATCGAAGCGATGACGAAGTGTATGGAAAAATCAGAAAAACTCAGCAAATCCTGATGACTTTCGCCGGACGTCAGGCCGCCACTTCGGTGCGGTTACGTCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/404941‑404786 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgtccggcGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTACGCGTACCGCTTCAATGGTGGTGCCTCCCGGTGAGCAGACCATATCTTTCAGT  >  NC_000913/404827‑404973                                                                                                                                                                                                                                                                                                                 CCACCATTGAAGCGGTACGCGTACTGGAAGAGAAAGGCTTCCGTGCTGCAGTGATCGAAGCGATGACGAAGTGTATGGAAAAATCAGAAAAACTCAGCAAATCCTGATGACTTTCGCCGGACGTCAGGCCGCCACTTCGGTGCGGTTACG                                                                                                                                                           >  1:799938/1‑150    CCATTGAAGCGGTACGCGTACTGGAAGAGAAAGGCTTCCGTGCTGCAGTGATCGAAGCGATGACGAAGTGTATGGAAAAATCAGAAAAACTCAGCAAATCCTGATGACTTTCGCCGGACGTCAGGCCGCCACTTCGGTGCGCTTACGTCC                                                                                                                                                        >  2:1519977/1‑150     CATTGAAGCGGTACGCGTACTGGAAGAGAAAGGCTTCCGTGCTGCAGTGATCGAAGCGATGACGAAGTGTATGGAAAAATCAGAAAAACTCAGCAAATCCTGATGACTTTCGCCGGACGTCAGGCCGCCACTTCGGTGCGGTTACGTCCG                                                                                                                                                       >  1:39416/1‑150     CATTGAAGCGGTACGAGTACTGGAAGAGAAAGGCTTCCGTGCTGCAGTGATCGAAGCGATGACCAAGTGTATGGAAAAATCAGAAAAACTCAGCAAATCCTGATGACTTTCGCCGGACGTCAGGCCGCCACTTCGCTGCGGTTACGTCag                                                                                                                                                       >  2:610677/1‑148      ATTGAAGCGGTACGCGTACTGGAAGAGAAAGGCTTCCGTGCTGCAGTGATCGAAGCGATGACGAAGTGTATGGAAAAATCAGAAAAACTCAGCAAATCCTGATGACTTTCGCCGGACGTCAGGCCGCCACTTCGGTGCGGTTACGTCCGG                                                                                                                                                      >  1:1368004/1‑150                                                                                                                    GCCGGACGTCAGGCCGCCACTTCGGTGCGGTTACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTACGCGTACCGCTTCAA                                        >  1:1087566/1‑150                                                                                                                    GCCGGACGTCAGGCCGCCACTTCGGTGCGGTTACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTACGCG                                                   <  1:653131/139‑1                                                                                                                    GCCGGACGTCAGGCCGCCACTTCGGTGCGGTTACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTACGCG                                                   >  2:653131/1‑139                                                                                                                      CGGACGTCAGGCCGCCACTTCGGTGCGGTTACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTACGCGTACCGCTTCAATG                                      >  2:838130/1‑150                                                                                                                        GACGTCAGGCCGCCACTTCGGTGCGGTTACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTACGCGTACC                                               <  1:278249/139‑1                                                                                                                        GACGTCAGGCCGCCACTTCGGTGCGGTTACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTACGCGTACC                                               >  2:278249/1‑139                                                                                                                                                     aGTCCTGCTAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCTCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTACGCGTACCGCTTCAATGGTGGTGCCTCCCGGTGAGCAGACCATATCTT       >  2:9492/2‑150                                                                                                                                                         CGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTACGCGTACCGCTTCAATGGTGGTGCCTCCCGGTGAGCAGACCATATCTTTCAG   >  1:56910/1‑150                                                                                                                                                         CGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTACGCGTACCGCTTCAATGGTGGTGCCTCCCGGTGAGCAGACCATATCTTTCAG   <  2:251703/150‑1                                                                                                                                                          GGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTACGCGTACCGCTTCAATGGTGGTGCCTCCCGGTGAGCAGACCATATCTTTCAGT  <  1:27132/150‑1                                                                                                                                                                                                                                                                                                                 CCACCATTGAAGCGGTACGCGTACTGGAAGAGAAAGGCTTCCGTGCTGCAGTGATCGAAGCGATGACGAAGTGTATGGAAAAATCAGAAAAACTCAGCAAATCCTGATGACTTTCGCCGGACGTCAGGCCGCCACTTCGGTGCGGTTACGTCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/404941‑404786 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgtccggcGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTACGCGTACCGCTTCAATGGTGGTGCCTCCCGGTGAGCAGACCATATCTTTCAGT  >  NC_000913/404827‑404973

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.