New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 45330490 (0.980)5 (0.060) 4/266 NT 5.5% coding (242/1476 nt) ampG muropeptide:H(+) symporter
?NC_000913 = 453332 85 (0.960)coding (214/1476 nt) ampG muropeptide:H(+) symporter

TCCACGCATCGAAGACTATATCCTGGGAAGCAGAGCAAAAAGCGATCACCACTGCCAGCGCCGCCATCCAGCGGAGTTGGGTGCCTGGTTCGAGAAAACCCATCGCCGCAATGGCGACTAATAACAGGATTTGCGTGGCGAGCAGCCAACCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/453152‑453304
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgcTACACGCCTCCATTTTTTGGGCGGCGGCGCGGTTGGCTGCTCGCCACGCAAATCCTGTTATTAGTCGCCATTGCGGCGATGGGTTTTCTCGAACCAGGCACCCAACTCCGCTGGATGGCGGCGCTGGCAGTGGTGATCGCTTTTT  <  NC_000913/453332‑453188
                                                                                                                                                                                                                                                                                                          
TCCACGCATCGAAGACTATATCCTGGGAAGCAGAGCAAAAAGCGATCACCACTGCCAGCGCCGCCATCCAGCGGAGTTGGGTGCCTGGTTCGAGAAAACCCATCGCCGCAATGGCGACTAATAACAGGATTTGCGTGGCGAGCAGCCAAC                                                                                                                                                      >  1:454243/1‑150
  CACGCATCGAAGACTATATCCTGGGAAGCAGAGCAAAAAGCGATCACCACTGCCAGCGCCGCCATCCAGCGGAGTTGGGTGCCTGGTTCGAGAAAACCCATCGCCGCAATGGCGACTAATAACAGGATTTGCGTGGCGAGCAGCCAACCG                                                                                                                                                    >  2:145100/1‑150
  CACGAATCGAAGACTATATCCTGGGAAGCAGAGCAAAAAGCGATCACCACTGCCAGCGCCGCCATCCAGCGGAGTTGGGTGCCTGGTTCGAGAAAACCCATCGCCGCAATGGCGACTAATAACAGGATTTGCGTGGCGAGCAGCCAACCG                                                                                                                                                    >  2:427417/1‑150
                               AGAGCAAAAAGCGATCACCACTGCCAGCGCCGCCATCCAGCGGAGTTGGGTGCCTGGTTCGAGAAAACCCATCGCCGCAATGGCGACTAATAACAGGATTTGCGTGGCGAGCAGCCAACCGCGCCGCCTCCATTTTTTGGGCGGCGGCGC                                                                                                                     <  2:626932/150‑1
                                        AGCGATCACCACTGCCAGCGCCGCCATCCAGCGGAGTTGGGTGCCTGGTTCGAGAAAACCCATCGCCGCAATGGCGACTAATAACAGGATTTGCGTGGCGAGCAGCCAACCGCTACACGCCTCCATTTTTTGGGCGGCGGCGCGGTTGGC                                                                                                              <  1:335154/150‑1
                                           GATCACCACTGCCAGCGGCGCCATCCAGCGGTGGTGGGTGCCTGGTTCGAGAAAACCCATCGCCGCAATGGCGACTAATAACAGGTTTTGCGTGGCGAGCAGCCAACCGCTACACGCCTCCATTTTTTGGGCGGCGGCGCGGTTGGCTGC                                                                                                           <  2:862781/150‑1
                                              CACCACTGCCAGCGCCGCCATCCAGCGGAGTTGGGTGCCTGGTTCGAGAAAACCCATCGCCGCAATGGCGACTAATAACAGGATTTGCGTGGCGAGCAGCCAACCGCTACACGCCTCCATTTTTTGGGCGGCGGCGCGGTTGGCTGCTCG                                                                                                        <  1:1285559/150‑1
                                              CACCACTGCCAGCGCCGCCATCCAGCGGAGTTGGGTGCCTGGTTCGAGAAAACCCATCGCCGCAATGGCGACTAATAACAGGATTTGCGTGGCGAGCAGCCAACCGCTACACGCCTCCATTTTTTGGGCGGCGGCGCGGTTGGCTGCTCG                                                                                                        <  1:1291457/150‑1
                                                                                                                                                    ACCGCTACACGCCTCCATTTTTTGGGCGGCGGCGCGGTTGGCTGCTCGCCACGCAAATCCTGTTATTAGTCGCCATTGCGGCGATGGGTTTTCTCGAACCAGGCACCCAACTCCGCTGGATGGCGGCGCTGGCAGTGGTGATCGCTTTTT  <  1:1029352/150‑1
                                                                                                                                                                                                                                                                                                          
TCCACGCATCGAAGACTATATCCTGGGAAGCAGAGCAAAAAGCGATCACCACTGCCAGCGCCGCCATCCAGCGGAGTTGGGTGCCTGGTTCGAGAAAACCCATCGCCGCAATGGCGACTAATAACAGGATTTGCGTGGCGAGCAGCCAACCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/453152‑453304
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgcTACACGCCTCCATTTTTTGGGCGGCGGCGCGGTTGGCTGCTCGCCACGCAAATCCTGTTATTAGTCGCCATTGCGGCGATGGGTTTTCTCGAACCAGGCACCCAACTCCGCTGGATGGCGGCGCTGGCAGTGGTGATCGCTTTTT  <  NC_000913/453332‑453188

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.