| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1028822 | 63 (0.680) | 5 (0.060) | 5/266 | NT | 7.2% | coding (1148/1191 nt) | rlmI | 23S rRNA m(5)C1962 methyltransferase |
| ? | NC_000913 | = 1028857 | 68 (0.770) | coding (1113/1191 nt) | rlmI | 23S rRNA m(5)C1962 methyltransferase | |||||
TAACAGGGAATGGCGGACCTGCTGGCCGATACCGAATTTGCTGGCAATCATAGTCACCTCCCGGGAAATCTTTACCTTTGATATAAGGGTAAAATTCCACATTTCAAGTTACATGACGCGACAGGCAAACCCTTTCAGATATAGCCCTTCC‑G‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1028671‑1028822‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcc‑gTCAGGCAGCCGATCATCCGGTGATCGCTACCTATCCGGAAGGGCTATATCTGAAAGGGTTTGCCTGTCGCGTCATGTAACTTGAAATGTGGAATTTTACCCTTATATCAAAGGTAAAGATTTCCCGGGAGGTGACTATGATTGCCAGC < NC_000913/1028857‑1028710 TAACAGGGAATGGCGGACCTGCTGGCCGATACCGAATTTGCTGGCAATCATAGTCACCTCCCGGGAAATCTTTACCTTTGATATAAGGGTAAAATTCCACATTTCAAGTTACATGACGCGACAGGCAAACCCTTTCAGATATAGCCCTTC > 1:423568/1‑150TAACAGGGAATGGCGGACCTGCTGGCCGATACCGAATTTGCTGGCAATCATAGTCACCTCCCGGGAAATCTTTACCTTTGATATAAGGGTAAAATTCCACATTTCAAGTTACATGACGCGACAGGCAAACCCTTTCAGATATAGCCCTTC < 2:669959/150‑1 AACAGGGAATGGCGGACCTGCTGGCCGATACCGAATTTGCTGGCAATCATAGTCACCTCCCGGGAAATCTTTACCTTTGATATAAGGGTAAAATTCCACATTTCAAGTTACATGACGCGACAGGCAAACCCTTTCAGATATAGCCCTTCC < 1:1566063/150‑1 CGAATTTGCTGGCAATCATAGTCACCTCCCGGGAAATCTTTACCTTTGATATAAGGGTAAAATTCCACATTTCAAGTTACATGACGCGACAGGCAAACCCTTTCAGATATAGCCCTTCC‑GTCAGGCAGCCGATCATCCGGTGATCGCTAC > 1:684265/1‑150 GCTGGCAATCATAGTCACCTCCCGGGAAATCTTTACCTTTGATATAAGGGTAAAATTCCACATTTCAAGTTACATGACGCGACAGGCAAACCCTTTCAGATATAGCCCTTCCGGATAGGCAGCCGATCATCCGGTGATCGCTACCTATCC < 1:481862/150‑1 TGGCAATCATAGTCACCTCCCGGGAAATCTTTACCTTTGATATAAGGGTAAAATTCCACATTTCAAGTTACATGACGCGACAGGCAAACCCTTTCAGATATAGCCCTTCC‑GTCAGGCAGCCGATCATCCGGTGATCGCTACCTATCCGGA < 2:438779/150‑1 TAGTCACCTCCCGGGAAATCTTTACCTTTGATATAAGGGTAAAATTCCACATTTCAAGTTACATGACGCGACAGGCAAACCCTTTCAGATATAGCCCTTCC‑GTCAGGCAGCCGATCATCCGGTGATCGCTACCTATCCGGAAGGGCTATA < 2:684265/150‑1 CTCCCGGGAAATCTTTACCTTTGATATAAGGGTAAAATTCCACATTTCAAGTTACATGACGCGACAGGCAAACCCTTTCAGATATAGCCCTTCC‑GTCAGGCAGCCGATCATCCGGTGATCGCTACCTATCCGGAAGGGCTATATCTGAAA < 2:748362/150‑1 C‑GTCAGGCAGCCGATCATCCGGTGATCGCTACCTATCCGGAAGGGCTATATCTGAAAGGGTTTGCCTGTCGCGTCATGTAACTTGAAATGTGGAATTTTACCCTTATATCAAAGGTAAAGATTTCCCGGGAGGTGACTATGATTGCCAGC > 1:700788/1‑150 TAACAGGGAATGGCGGACCTGCTGGCCGATACCGAATTTGCTGGCAATCATAGTCACCTCCCGGGAAATCTTTACCTTTGATATAAGGGTAAAATTCCACATTTCAAGTTACATGACGCGACAGGCAAACCCTTTCAGATATAGCCCTTCC‑G‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1028671‑1028822‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcc‑gTCAGGCAGCCGATCATCCGGTGATCGCTACCTATCCGGAAGGGCTATATCTGAAAGGGTTTGCCTGTCGCGTCATGTAACTTGAAATGTGGAATTTTACCCTTATATCAAAGGTAAAGATTTCCCGGGAGGTGACTATGATTGCCAGC < NC_000913/1028857‑1028710 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |