New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 1126460 | 77 (0.830) | 6 (0.070) | 6/264 | NT | 7.9% | coding (304/648 nt) | yceH | DUF480 domain‑containing protein YceH |
? | NC_000913 | = 1126492 | 67 (0.760) | coding (336/648 nt) | yceH | DUF480 domain‑containing protein YceH |
GAGTGAATCCGAAGTGCAGGAACAGCTGGATAATCTGGTCAAACGTCATTATCTACGCACAGTGAGCGGTTTTGGTAATCGGGTCACCAAATATGAGCAACGTTTTTGTAATTCAGAATTTGGCGATCTGAAACTGAGCGCAGCGGAAGTGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1126306‑1126460 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgtCTGGGCACCACGCAATAACAACGTGGTGATTAACGCCACTTCCGCTGCGCTCAGTTTCAGATCGCCAAATTCTGAATTACAAAAACGTTGCTCATATTTGGTGACCCGATTACCAAAACCGCTCACTGTGCGTAGATAATGACGTT < NC_000913/1126492‑1126347 GAGTGAATCCGAAGTGCAGGAACAGCTGGATAATCTGGTCAAACGTCATTATCTACGCACAGTGAGCGGTTTTGGTAATCGGGTCACCAAATATGAGCAACGTTTTTGTAATTCAGAATTTGGCGATCTGAAACTGAGCGCAGCGGAAGT < 2:776699/150‑1 AGTGAATCCGAAGTGCAGGAACAGCTGGATAATCTGGTCAAACGTCATTATCTACGCACAGTGAGCGGTTTTGGTAATCGGGTCACCAAATATGAGCAACGTTTTTGTAATTCAGAATTTGGCGATCTGAAACTGAGCGCAGCGGAAGTG > 1:1298661/1‑150 GTGAATCCGAAGTGCAGGAACAGCTGGATAATCTGGTCAAACGTCATTATCTACGCACAGTGAGCGGTTTTGGTAATCGGGTCACCAAATATGAGCAACGTTTTTGTAATTCAGAATTTGGCGATCTGAAACTGAGCGCAGCGGAAGTGG > 1:458938/1‑150 GTGAATCCGAAGTGCAGGAACAGCTGGATAATCTGGTCAAACGTCATTATCTACGCACAGTGAGCGGTTTTGGTAATCGGGTCACCAAATATGAGCAACGTTTTTGTAATTCAGAATTTGGCGATCTGAAACTGAGCGCAGCGGAAGTGG > 1:835960/1‑150 GTGAATCCGAAGTGCAGGAACAGCTGGATAATCTGGTCAAACGTCATTATCTACGCACAGTGAGCGGTTTTGGTAATCGGGTCACCAAATATGAGCAACGTTTTTGTAATTCAGAATTTGGCGATCTGAAACTGAGCGCAGCGGAAGTGG > 2:707569/1‑150 GAATCCGAAGTGCAGGAACAGCTGGATAATCTGGTCAAACGTCATTATCTACGCACAGTGAGCGGTTTTGGTAATCGGGTCACCAAATATGAGCAACGTTTTTGTAATTCAGAATTTGGCTATCTGAAACTGAGCGCAGCGGAAGTGGCG < 2:1258325/150‑1 tATAATCTTGTCAAACGTCATTATCTACGGACAGTGAGCTTTTTTGGTAATCGGGGCACCAAATATTAGCAACGTTTTTGTAATTCAGAATTTGGCGATCTGAAACTGAGCGCAGTTGACCTGGCGTCTGGGCACCACGCAATAACAACG < 2:622210/149‑1 GTCAAACGTCATTATCTACGCACAGTGAGCGGTTTTGGTAATCGGGTCACCAAATATGAGCAACGTTTTTGTAATTCAGAATTTGGCGATCTGAAACTGAGCGCAGCGGAAGTGGCGTCTGGGCACCACGCAATAACAACGTGGTGATTA > 2:1584274/1‑150 TCAAACTTCATTATCTACGCACAGTGAGCGGTTTTGGTAATCGGGTCACCAAATATGAGCAACGTTTTTTTAATTCAGAATTTGTCGATCTGAAACTGAGCGCAGCGGAAGTGGCGTCTGGGCACCACGCAATAACAACGTGGTGATTAA < 2:1286342/150‑1 CAAACGTCATTATCTACGCACAGTGAGCGGTTTTGGTAATCGGGTCACCAAATTTGAGCAACGTTTTTGTAATTCAGAATTTGGCGATCTGAAACTGAGCGCAGCGGAAGTGGCGT‑TAATCACCACGCAATAACAACGTGGTGATTAACG < 1:913992/150‑1 CATTATCTACGCACAGTGAGCGGTTTTGGTAATCGGGTCACCAAATATGAGCAACGTTTTTGTAATTCAGAATTTGGCGATCTGAAACTGAGCGCAGCGGAAGTGGCGTCTGGGCACCACGCAATAACAACGTGGTGATTAACGCCACTT < 1:1584274/150‑1 CTACGCACAGTGAGCGGTTTTGGTAATCGGGTCACCAAATATGAGCAACGTTTTTGTAATTCAGAATTTGGCGATCTGAAACTGAGCGCAGCGGAAGTGGCGTCTGGGCACCACGCAATAACAACGTGGTGATTAACGCCACTTCCGCTG < 1:980152/150‑1 gGGCGTCTGGGCACCACGCAATAACAACGTGGTGATTAACGCCACTTCCGCTGCGCTCAGTTTCAGATCGCCAAATTCTGAATTACAAAAACGTTGCTCATATTTGGTGACCCGATTACCAAAACCGCTCACTGTGCGTAGATAATGACG < 2:1443990/149‑1 GGCGTCTGGGCACCACGCAATAACAACGTGGTGATTAACGCCACTTCCGCTGCGCTCAGTTTCAGATCGCCAAATTCTGAATTACAAAAACGTTGCTCATATTTGGTGACCCGATTACCA < 1:1025562/120‑1 GGCGTCTGGGCACCACGCAATAACAACGTGGTGATTAACGCCACTTCCGCTGCGCTCAGTTTCAGATCGCCAAATTCTGAATTACAAAAACGTTGCTCATATTTGGTGACCCGATTACCA > 2:1025562/1‑120 GCGTCTGGGCACCACGCAATAACAACGTGGTGATTAACGCCACTTCCGCTGCGCTCAGTTTCAGATCGCCAAATTCTGAATTACAAAAACGTTGCTCATATTTGGTGACCCGATTACCAAAACCGCTCACTGTGCGTAGATAATGACGTT < 1:210819/150‑1 GAGTGAATCCGAAGTGCAGGAACAGCTGGATAATCTGGTCAAACGTCATTATCTACGCACAGTGAGCGGTTTTGGTAATCGGGTCACCAAATATGAGCAACGTTTTTGTAATTCAGAATTTGGCGATCTGAAACTGAGCGCAGCGGAAGTGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1126306‑1126460 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgtCTGGGCACCACGCAATAACAACGTGGTGATTAACGCCACTTCCGCTGCGCTCAGTTTCAGATCGCCAAATTCTGAATTACAAAAACGTTGCTCATATTTGGTGACCCGATTACCAAAACCGCTCACTGTGCGTAGATAATGACGTT < NC_000913/1126492‑1126347 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |