| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1259189 | 80 (0.870) | 5 (0.060) | 5/268 | NT | 6.3% | coding (1615/1680 nt) | dauA | aerobic C4‑dicarboxylate transporter DauA |
| ? | NC_000913 | = 1259221 | 71 (0.790) | coding (1583/1680 nt) | dauA | aerobic C4‑dicarboxylate transporter DauA | |||||
GCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAGTTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCATCGCCGCGCGACGATTCGGGAAGAACGCCAGGCGTCCCGGGATCGGTTGAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1259038‑1259189‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaatTCCAGCCACTGCGCACTATGGCTCGCGCTGGCATTCAACCGATCCCGGGACGCCTGGCGTTCTTCCCGAATCGTCGCGCGGCGATGGCGGATTTATAAGTACGAGATTGACCAGTCAGCGCAAACTGACTGGTCAGCAAACTGCAT < NC_000913/1259221‑1259076 GCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAGTTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCATCGCCGCGCGACGATTCGGGAAGAACGCCAGGCGTCCCGGGATCGGTTGA > 1:1191122/1‑150GCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAGTTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCATCGCCGCGCGACGATTCGGGAAGAACGCCAGGCGTCCCGGGATCGGTTGA > 1:231075/1‑150GCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAGTTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCATCGCCGCGCGACGATTCGGGAAGAACGCCAGGCGTCCCGGGATCGGTTGA > 2:344462/1‑150 AATGCAGTTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCATCGCCGCGCGACGATTCGGGAAGAACGCCAGGCGTCCCGGGATCGGTTGAATTCCAGCCACTGCGCACTATGGCTCGCGCTGGCATT < 1:800430/150‑1 ATGCAGTTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCATCGCCGCGCGACGATTCGGGAAGAACGCCAGGCGTCCCGGGATCGGTTGAATGCCAGCCACTGCGCACTATGGCTCGCGCTGGCATTC < 1:1397086/150‑1 CAGTTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCATCGCCGCGCGACGATTCGGGAAGAACGCCAGGCGTCCCGGGATCGGTTGAATTCCAGCCACTGCGCACTATGGCTCGCGCTGGCATTCAAC < 2:1294905/150‑1 AGTTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCATCGCCGCGCGACGATTCGGGAAGAACGCCAGGCGTCCCGGGATCGGTTGAATTCCAGCCACTGCGCACTATGGCTCGCGCTGGCATTCAACC < 2:1034522/150‑1 GTTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCATCGCCGCGCGACGATTCGGGAAGAACGCCAGGCGTCCCGGGATCGGTTGAATTCCAGCCACTGCGCACTATGGCTCGCGCTGGCATTCAACCG < 2:838084/150‑1 GAATTCCAGCCACTGCGCACTATGGCTCGCGCTGGCATTCAACCGATCCCGGGACGCCTGGCGTTCTTCCCGAATCGTCGCGCGGCGATGGCGGATTTATAAGTACGAGATTGACCAGTCAGCGCAAACTGACTGGTCAGCAAACTGCAT < 1:1047380/150‑1 GCCGCCGTAGCGATAATCGCCGTCATAGCTAACAAATAATGCAGTTTGCTGACCAGTCAGTTTGCGCTGACTGGTCAATCTCGTACTTATAAATCCGCCATCGCCGCGCGACGATTCGGGAAGAACGCCAGGCGTCCCGGGATCGGTTGAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1259038‑1259189‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaatTCCAGCCACTGCGCACTATGGCTCGCGCTGGCATTCAACCGATCCCGGGACGCCTGGCGTTCTTCCCGAATCGTCGCGCGGCGATGGCGGATTTATAAGTACGAGATTGACCAGTCAGCGCAAACTGACTGGTCAGCAAACTGCAT < NC_000913/1259221‑1259076 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |