New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2232163	71 (0.770)	4 (0.050)	4/264	NT	5.0%	coding (320/885 nt)	cdd	cytidine/deoxycytidine deaminase
	?	NC_000913	= 2232194	83 (0.940)					coding (351/885 nt)	cdd	cytidine/deoxycytidine deaminase

TCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2232014‑2232163 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagcgcTTTTTCACCACTCAACCAGGCGTGGCTGATCGCGCTTTGTTCGGCATGAACGGTTTGCTGCATTGTCGCACCAATAAATTCCATATTGGCACCGAAATACCAGGTTCCGCTCACACCGCGCGCAATTGCGCCAACATTAAAATTCG  <  NC_000913/2232194‑2232049                                                                                                                                                                                                                                                                                                          TCCTCTGGCCGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTATTGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTCTTTGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGC                                                                                                                                                    <  2:1590641/150‑1               CCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCTTTTTCACCACTCA                                                                                                                                      >  2:388072/1‑150                                 TGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCTTTTTCACCACTCAACCAGGCGTGGCTGATCG                                                                                                                    <  1:1496996/150‑1                                       ATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCTTTTTCACCACTCAACCAGGCGTGGCTGATCGCGCTTT                                                                                                              <  1:976707/150‑1                                            AATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCTTTTTCACCACTCAACCAGGCGTGGCTGATCGCGCTTTGTTCG                                                                                                         <  1:388072/150‑1                                                                                                                                                  AGCGCTTTTTCACCACTCAACCAGGCGTGGCTGATCGCGCTTTGTTCGGCATGAACGGTTTGCTGCATTGTCGCACCAATAAATTCCATATTGGCACCGAAATACCAGGTTCCGCTCACACCGCGCGCAATTGCGCCAACATTAAAATTC   <  1:526615/150‑1                                                                                                                                                   GCGCTTTTTCACCACTCAACCAGGCGTGGCTGATCGCGCTTTGTTCGGCATGAACGGTTTGCTGCATTGTCGCACCAATAAATTCCATATTGGCACCGAAATACCAGGTTCCGCTCACACCGCGCGCAATTGCGCCAACATTAAAATTCG  <  2:1005048/150‑1                                                                                                                                                                                                                                                                                                          TCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2232014‑2232163 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagcgcTTTTTCACCACTCAACCAGGCGTGGCTGATCGCGCTTTGTTCGGCATGAACGGTTTGCTGCATTGTCGCACCAATAAATTCCATATTGGCACCGAAATACCAGGTTCCGCTCACACCGCGCGCAATTGCGCCAACATTAAAATTCG  <  NC_000913/2232194‑2232049

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.