New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 3378252 = | 64 (0.690) | 5 (0.060) | 4/268 | NT | 7.3% | coding (400/429 nt) | rplM | 50S ribosomal subunit protein L13 |
? | NC_000913 | 3378316 = | 65 (0.730) | coding (336/429 nt) | rplM | 50S ribosomal subunit protein L13 |
TATCAAACAAGCGACCTTTGAAGAGATGATTGCTCGCCGTCCTGAGCGTGTGATTGAAATCGCGGTTAAAGGCATGTTGCCAAAAGGCCCGCTGGGTCGTGCTATGTTCCGTAAACTGAAAGTTTACGCGGGTAACGAGCACAACCACGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3378403‑3378252 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTAC > NC_000913/3378316‑3378462 TATCAAACAAGCGACCTTTGAAGAGATGATTGCTCGCCGTCCTGAGCGTGTGATTGAAATCGCGGTTAAAGGCATGTTGCCAAAAGGCCCGCTGGGTCGTGCTATGTTCCGTAAACTGAAAGTTTACGCGGGTAACGAGCACAACCACGC > 1:1556053/1‑150 TATCAAACAAGCGACCTTTGAAGAGATGATTGCTCGCCGTCCTGAGCGTGTGATTGAAATCGCGGTTAAAGGCATGTTGCCAAAAGGCCCGCTGGGTCGTGCTATGTTCCGTAAACTGAAAGTTTACGCGGGTAACGAGCACAACCACGC > 2:264127/1‑150 CCAAAAGGCCCGCTGGGTCGTGCTATGTTCCGTAAACTGAAAGTTTACGCGGGTAACGAGCACAACCACGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCG > 2:1138396/1‑150 GCCCGCTGGGTCGTGCTATGTTCCGTAAACTGAAAGTTTACGCGGGTAACGAGCACAACCCAGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTT > 2:477820/1‑150 GCCCGCTGGGTCGTGCTATGTTCCGTAAACTGAAAGTTTACGCGGGTAACGAGCACAACCACGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTT > 2:541816/1‑150 CCCGCTGGGTCGTGCTATGTTCCGTAAACTGAAAGTTTACGCGGGTAACGAGCACAACCACGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTG > 1:1420627/1‑150 GCACAACCACGCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTG < 1:541816/150‑1 GCGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTA < 2:1471488/150‑1 CGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGTGTGGTGATAGTCCACTTTGTCAGTACGCTTGTTGCCGGTTAC > 2:659620/1‑150 CGGGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTAC < 1:1481469/150‑1 TATCAAACAAGCGACCTTTGAAGAGATGATTGCTCGCCGTCCTGAGCGTGTGATTGAAATCGCGGTTAAAGGCATGTTGCCAAAAGGCCCGCTGGGTCGTGCTATGTTCCGTAAACTGAAAGTTTACGCGGGTAACGAGCACAACCACGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3378403‑3378252 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggGCCTTTTGGCAACATGCCTTTAACCGCGATTTCAATCACACGCTCAGGACGGCGAGCAATCATCTCTTCAAAGGTCGCTTGTTTGATACCACCGATGTGGCCGGTGTGGTGATAGTACACTTTGTCAGTACGCTTGTTGCCGGTTAC > NC_000913/3378316‑3378462 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |