New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3783963 =	101 (1.100)	7 (0.080)	6/266	NT	6.7%	coding (166/468 nt)	secB	SecB chaperone
	?	NC_000913	3783996 =	97 (1.090)					coding (133/468 nt)	secB	SecB chaperone

AACAACACTGAAATGACTTTCCAGATCCAACGTATTTATACCAAGGATATCTCTTTCGAAGCGCCGAACGCGCCGCACGTTTTCCAGAAAGATTGGCAACCAGAAGTTAAACTTGATCTGGATACGGCATCTTCCCAACTGGCAGATGACGTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3784116‑3783963 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtatCCAGATCAAGTTTAACTTCTGGTTGCCAATCTTTCTGGAAAACGTGCGGCGCGTTCGGCGCTTCGAAAGAGATATCCTTGGTATAAATACGTTGGATCTGGAAAGTCATTTCAGTGTTGTTTTGTTCTGACATGTGTAGAAAACCCTTA  >  NC_000913/3783996‑3784144                                                                                                                                                                                                                                                                                                                 AACAACACTGAAATGACTTTCCAGATCCAACGTATTTATACCAAGGATATCTCTTTCGAAGCGCCGAACGCGCCGCACGTTTTCCAGAAAGATTGGCAACCAGAAGTTAAACTTGATCTGGATACGGCATCTTCCCAACTGGCAGATGAC                                                                                                                                                           <  1:1555345/150‑1  ACAACACTGAAATGACTTTCCAGATCCAACGTATTTATACCAAGGATATCTCTTTCGAAGCGCCGAACGCGCCGCACGTTTTCCAGAAAGATTGGCAACCAGAAGTTAAACTTGATCTGGATACGGCATCTTCCCAACTGGCAGATGACG                                                                                                                                                          <  1:117030/150‑1  ACAACACTGAAATGACTTTCCAGATCCAACGTATTTATACCAAGGATATCTCTTTCGAAGCGCCGAACGCGCCGCACGTTTTCCAGAAAGATTGGCAACCAGAAGTTAAACTTGATCTGGATACGGCATCTTCCCAACTGGCAGATGACG                                                                                                                                                          >  2:852451/1‑150  ACAACACTGAAATGACTTTCCAGATCCAACGTATTTATACCAAGGATATCTCTTTCGAAGCGCCGAACGCGCCGCACGTTTTCCAGAAAGATTGGCAACCAGAAGTTAAACTTGATCTGGATACGGCATCTTCCCAACTGGCAGATGACG                                                                                                                                                          <  1:939423/150‑1   CAACACTGAAATGACTTTCCAGATCCAACGTATTTATACCAAGGATATCTCTTTCGAAGCGCCGAACGCGCCGCACGTTTTCCAGAAAGATTGGCAACCAGAAGTTAAACTTGATCTGGATACGGCATCTTCCCAACTGGCAGATGACGT                                                                                                                                                         <  2:1533273/150‑1   CAACACTGAAATGACTTTCCAGATCCAACGTATTTATACCAAGGATATCTCTTTCGAAGCGCCGAACGCGCCGCACGTTTTCCAGAAAGATTGGCAACCAGAAGTTAAACTTGATCTGGATACGGCATCTTCCCAACTGGCAGATGACGT                                                                                                                                                         <  2:329671/150‑1                                                                          CGCACGTTTTCCAGAAAGATTGGCAACCAGAAGTTAAACTTGATCTGGATACGGCATCTTCCCAACTGGCAGATGACGTATCCAGATCAAGTTTAACTTCTGGTTGCCAATCTTTCTGGAAAACGTGCGGCGCGTTCGGCGCTTCGAAAG                                                                                  >  2:1215995/1‑150                                                                                                GCAACCAGAAGTTAAACTTGATCTGGATACGGCATCTTCCCAACTGGCAGATGACGTATCCAGATCAAGTTTAACTTCTGGTTGCCAATCTTTCTGGAAAACGTGCGGCGCGTTCGGCGCTTCGAAAGAGATATCCTTGGTATAAATACG                                                            >  2:525021/1‑150                                                                                                         AGTTAAACTTGATCTGGATACGGCATCTTCCCAACTGGCAGATGACGTATCCAGATCAAGTTTAACTTCTGGTTGCCAATCTTTCTGGAAAACGTGCGGCGCGTTCGGCGCTTCGAAAGAGATATCCTTGGTATAAATACGTTGGATCTG                                                   <  1:1215995/150‑1                                                                                                                       TGGATACGGCATCTTCCCAACTGGCAGATGACGTATCCAGATCAAGTTTAACTTCTGGTTGCCAATCTTTCTGGAAAACGTGCGGCGCGTTCGGCGCTTCGAAAGAGATATCCTTGGTATAAATACGTTGGATCTGGAAAGTCATTTCAG                                     >  1:376266/1‑150                                                                                                                            ACGGCATCTTCCCAACTGGCAGATGACGTATCCAGATCAAGTTTAACTTCTGGTTGCCAATCTTTCTGGAAAACGTGCGGCGCGTTCGGCGCTTCGAAAGAGATATCCTTGGTATAAATACGTTGGATCTGGAAAGTCATTTCAGTGTTG                                >  1:435360/1‑150                                                                                                                             CGGCATCTTCCCAACTGGCAGATGACGTATCCAGATCAAGTTTAACTTCTGGTTGCCAATCTTTCTGGAAAACGTGCGGCGCGTTCGGCGCTTCGAAAGAGATATCCTTGGTATAAATACGTTGGATCTGGAAAGTCATTTCAGTGTTGT                               >  1:90689/1‑150                                                                                                                             CGGCATCTTCCCAACTGGCAGATGACGTATCCAGATCAAGTTTAACTTCTGGTTGCCAATCTTTCTGGAAAACGTGCGGCGCGTTCGGCGCTTCGAAAGAGATATCCTTGGTATAAATACGTTGGATCTGGAAAGTCATTTCAGTGTTGT                               >  2:72864/1‑150                                                                                                                                                      ccTATCCAGATCAAGGTTAACTGCTGGTTGCCAATCTTTCTGGAAAACGTGCGGCGCGTTCGGCGCTGCGAAAGAGATCTCCTTGGTATAAATACGTTGGATCTGGAAAGTCATTTCAGTCTTGTGTTGTTCTGACATGTGTAGAAAACC      <  2:289490/148‑1                                                                                                                                                         ATCCAGATCAAGTTTAACTTCTGGTTGCCAATCTTTCTGGAAAACGTGCGGCGCGTTCGGCGCTTCGAAAGAGATATCCTTGGTATAAATACGTTGGATCTGGAAAGTCATTTCAGTGTTGTTTTGTTCTGACATGTGTAGAAAACCCTT   >  2:923094/1‑150                                                                                                                                                         ATCCAGATCAAGTTTAACTTCTGGTTGCCAATCTTTCTGGAAAACGTGCGGCGCGTTCGGCGCTTCGAAAGAGATATCCTTGGTATAAATACGTTGGATCTGGAAAGTCATTTCAGTGTTGTTTTGTTCTGACATGTGTAGAAAACCCTT   >  2:226547/1‑150                                                                                                                                                          TCCAGATCAAGTTTAACTTCTGGTTGCCAATCTTTCTGGAAAACGTGCGGCGCGTTCGGCGCTTCGAAAGAGATATCCTTGGTATAAATACGTTGGATCTGGAAAGTCATTTCAGTGTTGTTTTGTTCTGACATGTGTAGAAAACCCTTA  <  2:555523/150‑1                                                                                                                                                          TCCAGATCAAGTTTAACTTCTGGTTGCCAATCTTTCTGGAAAACGTGCGGCGCGTTCGGCGCTTCGAAAGAGATATCCTTGGTATAAATACGTTGGATCTGGAAAGTCATTTCAGTGTTGTTTTGTTCTGACATGTGTAGAAAACCCTTA  <  2:1529301/150‑1                                                                                                                                                          TCCAGATCAAGTTTAACTTCTGGTTGCCAATCTTTCTGGAAAACGTGCGGCGCGTTCGGCGCTTCGAAAGAGATATCCTTGGTATAAATACGTTGGATCTGGAAAGTCATTTCAGTGTTGTTTTGTTCTGACATGTGTAGAAAACCCTTA  <  1:477203/150‑1                                                                                                                                                          TCCAGATCAAGTTTAACTTCTGGTTGCCAATCTTTCTGGAAAACGTGCGGCGCGTTCGGCGCTTCGAAAGAGATATCCTTGGTATAAATACGTTGGATCTGGAAAGTCATTTCAGTGTTGTTTTGTTCTGACATGTGTAGAAAACCCTTA  <  1:195419/150‑1                                                                                                                                                                                                                                                                                                                 AACAACACTGAAATGACTTTCCAGATCCAACGTATTTATACCAAGGATATCTCTTTCGAAGCGCCGAACGCGCCGCACGTTTTCCAGAAAGATTGGCAACCAGAAGTTAAACTTGATCTGGATACGGCATCTTCCCAACTGGCAGATGACGTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3784116‑3783963 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtatCCAGATCAAGTTTAACTTCTGGTTGCCAATCTTTCTGGAAAACGTGCGGCGCGTTCGGCGCTTCGAAAGAGATATCCTTGGTATAAATACGTTGGATCTGGAAAGTCATTTCAGTGTTGTTTTGTTCTGACATGTGTAGAAAACCCTTA  >  NC_000913/3783996‑3784144

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.