New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3857685	86 (0.930)	6 (0.070)	4/260	NT	6.8%	coding (720/1494 nt)	yidJ	putative sulfatase/phosphatase
	?	NC_000913	= 3857715	83 (0.960)					coding (690/1494 nt)	yidJ	putative sulfatase/phosphatase

TGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCACGTTGCTCTGGCGTTAAGGCATTGATGACCCGTCCGATTTGGTCATCAACAAAGTCATTACAGGCAAAATAGAGCGGATGGTGATAAAGCCCGTCATCACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3857532‑3857685 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcaccgCTTATGGGCGCAGGCGATGCCATCGCCAGTCGGTGATGACGGGCTTTATCACCATCCGCTCTATTTTGCCTGTAATGACTTTGTTGATGACCAAATCGGACGGGTCATCAATGCCTTAACGCCAGAGCAACGTGAAAATACGTG  <  NC_000913/3857715‑3857572                                                                                                                                                                                                                                                                                                            TGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCACGTTGCTCTGGCGTTAAGGCATTGATGACCCGTCCGATTTGGTCATCAACAAAGTCATTACAGGCAAAATAGAGCGGATGGTGATAAAGCCCGTCATC                                                                                                                                                      >  2:110671/1‑150  GCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCACGTTGCTCTGGCGTTAAGGCATTGATGACCCGTCCGATTTGGTCATCAACAAAGTCATTACAGGCAAAATAGAGCGGATGGTGATAAAGCCCGTCATCA                                                                                                                                                     <  1:672482/150‑1  GCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCACGTTGCTCTGGCGTTAAGGCATTGATGACCCGTCCGATTTGGTCATCAACAAAGTCATTACAGGCAAAATAGAGCGGATGGTGATAAAGCCCGTCATCA                                                                                                                                                     >  2:1086773/1‑150   CGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCACGTTGCTCTGGCGTTAAGGCATTGATGACCCGTCCGATTTGGTCATCAACAAAGTCATTACAGGCAAAATAGAGCGGATGGTGATAAAGCCCGTCATCAC                                                                                                                                                    <  2:117079/150‑1                GCCGTGATCGGAGGTATAAATAACCCACGTATTTTCACGTTGCTCTGGCGTTAAGGCATTGATGACCCGTCCGATTTGGTCATCAACAAAGTCATTACAGGCAAAATAGAGCGGATGGTGATAAAGCCCGTC                                                                                                                                                         >  1:306031/1‑132                GCCGTGATCGGAGGTATAAATAACCCACGTATTTTCACGTTGCTCTGGCGTTAAGGCATTGATGACCCGTCCGATTTGGTCATCAACAAAGTCATTACAGGCAAAATAGAGCGGATGGTGATAAAGCCCGTC                                                                                                                                                         <  2:306031/132‑1                               ATAAATAACCCACGTATTTTCACGTTGCTCTGGCGTTAAGGCATTGATGACCCGTCCGATTTGGTCATCAACAAAGTCATTACAGGCAAAATAGAGCGGATGGTGATAAAGCCCGTCATCACCG‑‑‑ACTGGCGCAGGCGATGCCATCGCCAG                                                                                                                     <  2:1413939/150‑1                                              ATTTTCACGTTGCTCTGGCGTTAAGGCATTGATGACCCGTCCGATTTGGTCATCAACAAAGTCATTACAGGCAAAATAGAGCGGATGGTGATAAAGCCCGTCATCACCGCTTATGGGCGCAGGCGATGCCATCGCCAGTCGGTGATGACG                                                                                                         <  1:1252630/150‑1                                              ATTTTCACGTTGCTCTGGCGTTAAGGCATTGATGACCCGTCCGATTTGGTCATCAACAAAGTCATTACAGGCAAAATAGAGCGGATGGTGATAAAGCCCGTCATCACCGCTTATGGGCGCAGGCGATGCCATCGCCAGTCGGTGATGACG                                                                                                         <  1:1631326/150‑1                                                TTTCACGTTGCTCTGGCGTTAAGGCATTGATGACCCGTCCGATTTGGTCATCAACAAAGTCATTACAGGCAAAATAGAGCGGATGGTGATAAAGCCCGTCATCACCGCTTATGGGCGCAGGCGATTCCATCGCCAGTCGGTGATGACGGG                                                                                                       <  2:145202/150‑1                                                        TGCTCTGGCGTTAAGGCATTGATGACCCGTCCGATTTGGTCATCAACAAAGTCATTACAGGCAAAATAGAGCGGATGGTGATAAAGCCCGTCATCACCGCTTATGGGCGCAGGCGATGCCATCGCCAGTCGGTGATGACGGGCTTTATCA                                                                                               <  1:85226/150‑1                                                                    AAGGCATTGATGACCCGTCCGATTTGGTCATCAACAAAGTCATTACAGGCAAAATAGACCGCATGGTGATAAAGCCCGTCATCACCGCTTATGGGCGCAGGCGATGCCATCGCCAGTCGGTGATGACGGGCTTTATCACCATCCGCTCTA                                                                                   <  1:124655/150‑1                                                                                                                                                     TCACCGCTTATGGGCGCAGGCGATGCCATCGCCAGTCGGTGATGACGGGCTTTATCACCATCCGCTCTATTTTGCCTGTAATGACTTTGTTGATGACCAAATCGGACGGGTCATCAATGCCTTAACGCCAGAGCAACGTGAAAATACGTG  <  2:53079/150‑1                                                                                                                                                                                                                                                                                                            TGCGCCCATCATTTCGCCGTGATCGGAGGTATAAATAACCCACGTATTTTCACGTTGCTCTGGCGTTAAGGCATTGATGACCCGTCCGATTTGGTCATCAACAAAGTCATTACAGGCAAAATAGAGCGGATGGTGATAAAGCCCGTCATCACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3857532‑3857685 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcaccgCTTATGGGCGCAGGCGATGCCATCGCCAGTCGGTGATGACGGGCTTTATCACCATCCGCTCTATTTTGCCTGTAATGACTTTGTTGATGACCAAATCGGACGGGTCATCAATGCCTTAACGCCAGAGCAACGTGAAAATACGTG  <  NC_000913/3857715‑3857572

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.