New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 4446407 | 78 (0.850) | 6 (0.070) | 5/264 | NT | 7.5% | coding (2296/3780 nt) | tamB | translocation and assembly module subunit TamB |
? | NC_000913 | = 4446433 | 73 (0.830) | coding (2322/3780 nt) | tamB | translocation and assembly module subunit TamB |
GCCGCAAACTATCGATGCGGGGGCCGAAGGGCGTGCGGTGGTGAATCTCAACCGCTTCGACCTCGCCATGCTGAAACCGTTTATGCCAGAAACCACTCAGGCCAGCGGTATCTTCACGGGTAAAGCGGACGTTGCCTGGGACACCACGAAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4446256‑4446407 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaaagGGTGATACTGCCCTGCGGCAGCCCCTCTTTCGTGGTGTCCCAGGCAACGTCCGCTTTACCCGTGAAGATACCGCTGGCCTGAGTGGTTTCTGGCATAAACGGTTTCAGCATGGCGAGGTCGAAGCGGTTGAGATTCACCACCGCACGCC < NC_000913/4446433‑4446285 GCCGCAAACTATCGATGCGGGGGCCGAAGGGCGTGCGGTGGTGAATCTCAACCGCTTCGACCTCGCCATGCTGAAACCGTTTATGCCAGAAACCACTCAGGCCAGCGGTATCTTCACGGGTAAAGCGGACGTTGCCTGGGACACCACGAA < 1:859010/150‑1 CGCAAACTATCGATGCGGGGGCCGAAGGGCGTGCGGTGGTGAATCTCAACCGCTTCGACCTCGCCATGCTGAAACTGTTTATGCCAGAAACCACTCAGGCCAGCGGTATCTTCACGGGTAAAGCGGACGTTGCCTGGGACACCACGAAAG > 2:1281535/1‑150 CGCAAACTATCGATGCGGGGGCCGAAGGGCGTGCGGTGGTGAATCTCAACCGCTTCGACCTCGCCATGCTGAAACCGTTTATGCCAGAAACCACTCAGGCCAGCGGTATCTTCACGGGTAAAGCGGACGTTGCCTGGGACACCACGAAAG > 1:1189664/1‑150 GGTGGTGAATCTCAACCGCTTCGACCTCGCCATGCTGAAACCGTTTATGCCAGAAACCACTCAGGCCAGCGGTATCTTCACGGGTAAAGCGGACGTTGCCTGGGACACCACGAAAGGGTGATACTGCCCTGCGGCAGCCCCTCTTTCGTG < 1:869718/150‑1 GTGGTGAATCTCAACCGCTTCGACCTCGCCATGCTGAAACCGTTTATGCCAGAAACCACTCAGGCCAGCGGTATCTTCACGGGTAAAGCGGACGTTGCCTGGGACACCCCGAAAGGGTGATACTGCCCTGCGGCAGCCCCTCTTTCGTGG < 2:1223854/150‑1 GTGGTGAATCTCAACCGCTTCGACCTCGCCATGCTGAAACCGTTTATGCCAGAAACCACTCAGGCCAGCGGTATCTTCACGGGTAAAGCGGACGTTGCCTGGGACACCACGAAAGGGTGATACTGCCCTGCGGCAGCCCCTCTTTCGTGG < 2:991968/150‑1 CTCAACCGCTTCGACCTCGCCATGCTGAAACCGTTTATGCCAGAAACCACTCAGGCCAGCGGTATCTTCACGGGTAAAGCGGACGTTGCCTGGGACACCACGAAAGGGTGATACTGCCCTGCGGCAGCCCCTCTTTCGTGGTGTCCCAGG < 1:1465472/150‑1 CTGAAACCGTTTATGCCAGAAACCACTCAGGCCAGCGGTATCTTCACGGGTAAAGCGGACGTTGCCTGGGACACCACGAAAGGGTGATACTGCCCTGCGGCAGC < 1:1170599/104‑1 CTGAAACCGTTTATGCCAGAAACCACTCAGGCCAGCGGTATCTTCACGGGTAAAGCGGACGTTGCCTGGGACACCACGAAAGGGTGATACTGCCCTGCGGCAGC > 2:1170599/1‑104 GAAAGGGTGATACTGCCCTGCGGCAGCCCCTCTTTCGTGGTGTCCCAGGCAACGTCCGCTTTACCCGTGAAGATACCGCTGGCCTGAGTGGTTTCTGGCATAAACGGTTTCAGCATGGCGAGGTCGAAGCGGTTGAGATTCACCACCGCA < 1:85468/150‑1 AGGGTGATACTGCCCTGCGGCAGCCCCTCTTTCGTGGTGTCCCAGGCAACGTCCGCTTTACCCGTGAAGATACCGCTGGCCTGAGTGGTTTCTGGCATAAACGGTTCCAGCATGGCGAGGTCGAAGCGGTTGAGATTCACCACCGCACGC < 1:869845/150‑1 GGGTGATACTGCCCTGCGGCAGCCCCTCTTTCGTGGTGTCCCAGGCAACGTCCGCTTTACCCGTGAAGATACCGCTGGCCTGAGTGGTTTCTGGCATAAACGGTTTCAGCATGGCGAGGTCGAAGCGGTTGAGATTCACCACCGCACGCC < 2:184545/150‑1 GGGTGATACTGCCCTGCGGCAGCCCCTCTTTCGTGGTGTCCCAGGCAACGTCCGCTTTACCCGTGAAGATACCGCTGGCCTGAGTGGTTTCTGGCATAAACGGTTTCAGCATGGCGAGGTCGAAGCGGTTGAGATTCACCACCGCACGCC < 2:667090/150‑1 GCCGCAAACTATCGATGCGGGGGCCGAAGGGCGTGCGGTGGTGAATCTCAACCGCTTCGACCTCGCCATGCTGAAACCGTTTATGCCAGAAACCACTCAGGCCAGCGGTATCTTCACGGGTAAAGCGGACGTTGCCTGGGACACCACGAAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4446256‑4446407 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaaagGGTGATACTGCCCTGCGGCAGCCCCTCTTTCGTGGTGTCCCAGGCAACGTCCGCTTTACCCGTGAAGATACCGCTGGCCTGAGTGGTTTCTGGCATAAACGGTTTCAGCATGGCGAGGTCGAAGCGGTTGAGATTCACCACCGCACGCC < NC_000913/4446433‑4446285 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |