New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 444640778 (0.850)6 (0.070) 5/264 NT 7.5% coding (2296/3780 nt) tamB translocation and assembly module subunit TamB
?NC_000913 = 4446433 73 (0.830)coding (2322/3780 nt) tamB translocation and assembly module subunit TamB

GCCGCAAACTATCGATGCGGGGGCCGAAGGGCGTGCGGTGGTGAATCTCAACCGCTTCGACCTCGCCATGCTGAAACCGTTTATGCCAGAAACCACTCAGGCCAGCGGTATCTTCACGGGTAAAGCGGACGTTGCCTGGGACACCACGAAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4446256‑4446407
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaaagGGTGATACTGCCCTGCGGCAGCCCCTCTTTCGTGGTGTCCCAGGCAACGTCCGCTTTACCCGTGAAGATACCGCTGGCCTGAGTGGTTTCTGGCATAAACGGTTTCAGCATGGCGAGGTCGAAGCGGTTGAGATTCACCACCGCACGCC  <  NC_000913/4446433‑4446285
                                                                                                                                                                                                                                                                                                             
GCCGCAAACTATCGATGCGGGGGCCGAAGGGCGTGCGGTGGTGAATCTCAACCGCTTCGACCTCGCCATGCTGAAACCGTTTATGCCAGAAACCACTCAGGCCAGCGGTATCTTCACGGGTAAAGCGGACGTTGCCTGGGACACCACGAA                                                                                                                                                         <  1:859010/150‑1
  CGCAAACTATCGATGCGGGGGCCGAAGGGCGTGCGGTGGTGAATCTCAACCGCTTCGACCTCGCCATGCTGAAACTGTTTATGCCAGAAACCACTCAGGCCAGCGGTATCTTCACGGGTAAAGCGGACGTTGCCTGGGACACCACGAAAG                                                                                                                                                       >  2:1281535/1‑150
  CGCAAACTATCGATGCGGGGGCCGAAGGGCGTGCGGTGGTGAATCTCAACCGCTTCGACCTCGCCATGCTGAAACCGTTTATGCCAGAAACCACTCAGGCCAGCGGTATCTTCACGGGTAAAGCGGACGTTGCCTGGGACACCACGAAAG                                                                                                                                                       >  1:1189664/1‑150
                                    GGTGGTGAATCTCAACCGCTTCGACCTCGCCATGCTGAAACCGTTTATGCCAGAAACCACTCAGGCCAGCGGTATCTTCACGGGTAAAGCGGACGTTGCCTGGGACACCACGAAAGGGTGATACTGCCCTGCGGCAGCCCCTCTTTCGTG                                                                                                                     <  1:869718/150‑1
                                     GTGGTGAATCTCAACCGCTTCGACCTCGCCATGCTGAAACCGTTTATGCCAGAAACCACTCAGGCCAGCGGTATCTTCACGGGTAAAGCGGACGTTGCCTGGGACACCCCGAAAGGGTGATACTGCCCTGCGGCAGCCCCTCTTTCGTGG                                                                                                                    <  2:1223854/150‑1
                                     GTGGTGAATCTCAACCGCTTCGACCTCGCCATGCTGAAACCGTTTATGCCAGAAACCACTCAGGCCAGCGGTATCTTCACGGGTAAAGCGGACGTTGCCTGGGACACCACGAAAGGGTGATACTGCCCTGCGGCAGCCCCTCTTTCGTGG                                                                                                                    <  2:991968/150‑1
                                              CTCAACCGCTTCGACCTCGCCATGCTGAAACCGTTTATGCCAGAAACCACTCAGGCCAGCGGTATCTTCACGGGTAAAGCGGACGTTGCCTGGGACACCACGAAAGGGTGATACTGCCCTGCGGCAGCCCCTCTTTCGTGGTGTCCCAGG                                                                                                           <  1:1465472/150‑1
                                                                      CTGAAACCGTTTATGCCAGAAACCACTCAGGCCAGCGGTATCTTCACGGGTAAAGCGGACGTTGCCTGGGACACCACGAAAGGGTGATACTGCCCTGCGGCAGC                                                                                                                                 <  1:1170599/104‑1
                                                                      CTGAAACCGTTTATGCCAGAAACCACTCAGGCCAGCGGTATCTTCACGGGTAAAGCGGACGTTGCCTGGGACACCACGAAAGGGTGATACTGCCCTGCGGCAGC                                                                                                                                 >  2:1170599/1‑104
                                                                                                                                                   GAAAGGGTGATACTGCCCTGCGGCAGCCCCTCTTTCGTGGTGTCCCAGGCAACGTCCGCTTTACCCGTGAAGATACCGCTGGCCTGAGTGGTTTCTGGCATAAACGGTTTCAGCATGGCGAGGTCGAAGCGGTTGAGATTCACCACCGCA      <  1:85468/150‑1
                                                                                                                                                      AGGGTGATACTGCCCTGCGGCAGCCCCTCTTTCGTGGTGTCCCAGGCAACGTCCGCTTTACCCGTGAAGATACCGCTGGCCTGAGTGGTTTCTGGCATAAACGGTTCCAGCATGGCGAGGTCGAAGCGGTTGAGATTCACCACCGCACGC   <  1:869845/150‑1
                                                                                                                                                       GGGTGATACTGCCCTGCGGCAGCCCCTCTTTCGTGGTGTCCCAGGCAACGTCCGCTTTACCCGTGAAGATACCGCTGGCCTGAGTGGTTTCTGGCATAAACGGTTTCAGCATGGCGAGGTCGAAGCGGTTGAGATTCACCACCGCACGCC  <  2:184545/150‑1
                                                                                                                                                       GGGTGATACTGCCCTGCGGCAGCCCCTCTTTCGTGGTGTCCCAGGCAACGTCCGCTTTACCCGTGAAGATACCGCTGGCCTGAGTGGTTTCTGGCATAAACGGTTTCAGCATGGCGAGGTCGAAGCGGTTGAGATTCACCACCGCACGCC  <  2:667090/150‑1
                                                                                                                                                                                                                                                                                                             
GCCGCAAACTATCGATGCGGGGGCCGAAGGGCGTGCGGTGGTGAATCTCAACCGCTTCGACCTCGCCATGCTGAAACCGTTTATGCCAGAAACCACTCAGGCCAGCGGTATCTTCACGGGTAAAGCGGACGTTGCCTGGGACACCACGAAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4446256‑4446407
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaaagGGTGATACTGCCCTGCGGCAGCCCCTCTTTCGTGGTGTCCCAGGCAACGTCCGCTTTACCCGTGAAGATACCGCTGGCCTGAGTGGTTTCTGGCATAAACGGTTTCAGCATGGCGAGGTCGAAGCGGTTGAGATTCACCACCGCACGCC  <  NC_000913/4446433‑4446285

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.