New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4526958 =	80 (0.870)	6 (0.070)	5/264	NT	7.2%	coding (580/633 nt)	sgcE	KpLE2 phage‑like element; putative epimerase SgcE
	?	NC_000913	4526988 =	79 (0.900)					coding (550/633 nt)	sgcE	KpLE2 phage‑like element; putative epimerase SgcE

GGGACAGCGGTTTATTCCCTCCATGTGCGAGAAAATCCAAAAAGTACGCACGGCTTTTCCTCAGACCGAGTGCTGGGCCGACGGTGGAATTACGCTGGCAGCTGCACAGCAACTGGCAGCAGCTGGGGCGCAACATATGGTGATTGGGCGCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4527112‑4526958 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcccCAGCTGCTGCCAGTTGCTGTGCAGCTGCCAGCGTAATTCCACCGTCGGCCCAGCACTCGGTCTGAGGAAAAGCCGTGCGTACTTTTTGGATTTTCTCGCACATGGAGGGAATAAACCGCTGTCCCTGCCCATCGGGCTCACTGGTCATC  >  NC_000913/4526988‑4527136                                                                                                                                                                                                                                                                                                                  GGGACAGCGGTTTATTCCCTCCATGTGCGAGAAAATCCAAAAAGTACGCACGGCTTTTCCTCAGACCGAGTGCTGGGCCGACGGTGGAATTACGCTGGCAGCTGCACAGCAACTGGCAGCAGCTGGGGCGCAACATATGGTGATTGGGCG                                                                                                                                                            <  2:691697/150‑1    ACAGCGGTTTATTCCCTCCATGTGCGAGAAAATCCAAAAAGTACGCACGGCTTTTCCTCAGACCGAGTGCTGGGCCGACGGTGGAATTACGCTGGCAGCTGCACAGCAACTGGCAGCAGCTGGGGCGCAACATATGGTGATTGGGCGCGC                                                                                                                                                         <  1:436027/150‑1     CAGCGGTTTATTCCCTCCATGTGCGAGAAAATCCAAAAAGTACGCACGGCTTTTCCTCAGACCGAGTGCTGGGCCGACGGTGGAATTACGCTGGCAGCTGCACAGCAACTGGCAGCAGCTGGGGCGCAACATATGGTGATTGGGCGCGCC                                                                                                                                                        >  2:1029480/1‑150      AGCGGTTTATTCCCTCCATGTGCGAGAAAATCCAAAAAGTACGCACGGCTTTTCCTCAGACCGAGTGCTGGGCCGACGGTGGAATTACGCTGGCAGCTGCACAGCAACTGGCAGCAGCTGGGGCGCAACATATGGTGATTGGGCGCGCCC                                                                                                                                                       <  1:1029480/150‑1                         GTGCGAGAAAATCCAAAAAGTACGCACGGCTTTTCCTCAGACCGAGTGCTGGGCCGACGGTGGAATTACGCTGGCAGCTGCACAGCAACTGGCAGCAGCTGGGGCGCAACATATGGTGATTGGGCGCGCCC                                                                                                                                                       >  1:1408445/1‑131                         GTGCGAGAAAATCCAAAAAGTACGCACGGCTTTTCCTCAGACCGAGTGCTGGGCCGACGGTGGAATTACGCTGGCAGCTGCACAGCAACTGGCAGCAGCTGGGGCGCAACATATGGTGATTGGGCGCGCCC                                                                                                                                                       <  2:1408445/131‑1                                                                                                                 CTGGCAGCAGCTGGGGCGCAACATATGGTGATTGGGCGCGCCCCAGCTGCTGCCAGTTGCTGTGCAGCTGCCAGCGTAATTCCACCGTCGGCCCAGCACTCGGTCTGAGGAAAAGCCGTGCGTACTTTTTGGATTTTCTCGCACATGGAG                                            >  1:256264/1‑150                                                                                                                    GCAGCAGCTGGGGCGCAACATATGGTGATTGGGCGCGCCCCAGCTGCTGCCAGTTGCTGTGCAGCTGCCAGCGTAATTCCACCGTCGGCCCAGCACTCGGTCTGAGGAAAAGCCGTGCGTACTTTTTGGATTTTCTCGCACATGGAGGGA                                         >  2:218587/1‑150                                                                                                                        CAGCTGGGGCGCAACATATGGTGATTGGGCGCGCCCCAGCTGCTGCCAGTTGCTGTGCAGCTGCCAGCGTAATTCCACCGTCGGCCCAGCACTCGGTCTGAGGAAAAGCCGTGCGTACTTTTTGGATTTTCTCGCACATGGAGGGAATAA                                     >  1:597767/1‑150                                                                                                                           CTGGGGCGCAACATATGGTGATTGGGCGCGCCCCAGCTGCTGCCAGTTGCTGTGCAGCTGCCAGCGTAATTCCACCGTCGGCCCAGCACTCGGTCTGAGGAAAAGCCGTGCGTACTTTTTGGATTTTCTCGCACATGGAGGGAATAAACC                                  >  2:939375/1‑150                                                                                                                           CTGGGGCGCAACATATGGTGATTGGGCGCGCCCCAGATGATGCCAGTTGCTGTGCAGCTGCCAGCGTAATTCAACCTTCGGCCCAGCAGTCGGTCGGAGGAAAAGCCGTGCGTACTTTTTGGATTTTCTCGCACATGGAGGGAATAAACC                                  >  2:406971/1‑150                                                                                                                             GGGGCGCAACATATGGTGATTGGGCGCGCCCCAGCTGCTGCCAGTTGCTGTGCAGCTGCCAGCGTAATTCCACCGTCGGCCCAGCACTCGGTCTGAGGAAAAGCCGTGCGTACTTTTTGGATTTTCTCGCACATGGAGGGAATAAACCGC                                >  2:1238243/1‑150                                                                                                                                                      GCGCCCCAGCTGCTGCCAGTTGCTGTGCAGCTGCCAGCGTAATTCCACCGTCGGCCCAGCACTCGGTCTGAGGAAAAACCGTGCGTACTTTTTGGATTTTCTCGCACATTGAGGGAATAAACCGCTGTCCCTGCCCATCGGGCTCACTGG       <  1:1174911/150‑1                                                                                                                                                       CGCCCCAGCTGCTGCCAGTTGCTGTGCAGCTGCCAGCGTAATTCCACCGTCGGCCCAGCACTCGGTCTGAGGAAAAGCCGTGCGTACTTTTTGGATTTTCTCGCACATGGAGGGAATAAACCGCTGTCCCTGCCCATCGGGCTCACTGGT      <  1:927229/150‑1                                                                                                                                                       CGCCCCAGCTGCTGCCAGTTGCTGTGCAGCTGCCAGCGTAATTCCACCGTCGGCCCAGCACTCGGTCTGAGGAAAAGCCGTGCGTACTTTTTGGATTTTCTCGCACATGGAGGGAATAAACCGCTGTCCCTGCCCATCGGGCTCACTGGT      >  2:286024/1‑150                                                                                                                                                       CGCCCCAGCTGCTGCCAGTTGCTGTGCAGCTGCCAGCGTAATTCCACCGTCGGCCCAGCACTCGGTCTGAGGAAAAGCCGTGCGTACTTTTTGGATTTTCTCGCACATGGAGGGAATAAACCGCTGTCCCTGCCCATCGGGCTCACTGGT      <  1:10483/150‑1                                                                                                                                                          aCCACCTGCTCCCAGTTGCTTTGCAGCTGCCAGCGTAATTCCACCGTCGGCCCAGCACTCGGTCAGAGGAAAAGCCGTGCGTACTTTTTGGATTTTCTCGCACATGGAGGGAATAAACCGCTGTCCCTGCCCATCGGGCTCACTGGTCAT   >  2:344681/2‑150                                                                                                                                                           CCAGCTGCTGCCAGTTGCTGTGCAGCTGCCAGCGTAATTCCACCGTCTGCCCAGCACTCGGTCTGAGGAAAAGCCGTGCGTACTTTTTGGATTTTCTCGCACATGGATGGAATAAACCGCTGTCCCTGCCCATCGGGCTCACTGGTCATC  <  1:1343082/150‑1                                                                                                                                                                                                                                                                                                                  GGGACAGCGGTTTATTCCCTCCATGTGCGAGAAAATCCAAAAAGTACGCACGGCTTTTCCTCAGACCGAGTGCTGGGCCGACGGTGGAATTACGCTGGCAGCTGCACAGCAACTGGCAGCAGCTGGGGCGCAACATATGGTGATTGGGCGCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4527112‑4526958 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcccCAGCTGCTGCCAGTTGCTGTGCAGCTGCCAGCGTAATTCCACCGTCGGCCCAGCACTCGGTCTGAGGAAAAGCCGTGCGTACTTTTTGGATTTTCTCGCACATGGAGGGAATAAACCGCTGTCCCTGCCCATCGGGCTCACTGGTCATC  >  NC_000913/4526988‑4527136

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.