| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4638146 | 56 (0.610) | 6 (0.070) | 5/254 | NT | 10.2% | intergenic (+26/‑32) | creC/creD | sensory histidine kinase CreC/putative inner membrane protein |
| ? | NC_000913 | = 4638170 | 54 (0.640) | intergenic (+50/‑8) | creC/creD | sensory histidine kinase CreC/putative inner membrane protein | |||||
GGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4637987‑4638146‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acatagtcttcTCCTTTGCAATGGCAGCAGGATACGAAGACTATGTGGGAAGAATTTGAAGCTATGTGAAGTGACGGTGAAGTCGAAGCGAGGCCAGCACGCCACCTTCCTGCACGTTGCGCAGCGTGACTTCGCCGTTAAACAAACGGGCGACCTCACT < NC_000913/4638170‑4638022 GGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCA > 1:992300/1‑150 GCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCTGTTTGTTTAACGGCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCAC < 2:1148700/150‑1 CAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACA > 1:1084474/1‑150 AAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACAT > 2:499927/1‑150 AAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAG < 1:8762/150‑1 GCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTT > 2:128912/1‑150 TCGCCCGTTTGTTTAACGGCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCTCCTTTGCAATGGCAGCAGGATACGAAGACTA < 1:499927/150‑1 TCGCCCGTTTGTTTAACGGCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCTCCTTTGCAATGGCAGCAGGATACGAAGACTA < 1:1381329/150‑1 CGCCCGTTTGTTTAACGGCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCTCCTTTGCAATGGCAGCAGGATACGAAGACTAT < 1:818158/150‑1 CCCGTTTGTTTAACGGCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCTCCTTTGCAATGGCAGCAGGATACGAAGACTATGT < 2:1233303/150‑1 CGTTTGTTTAACGGCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCTCCTTTGCAATGGCAGCAGGATACGAAGACTATGTGG < 1:1036683/150‑1 AACGGCGAAGTCACGCTGCGCAACGTGCAGGAAGGGGGCGTGCGGGCCGCGCGTCGACTTCACCGTCTCTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCTCCTTTGCACTGGCAGCAGGATACGAAGACTATGTGGGAAGAATTT < 2:856269/150‑1 ACATAGTCTTCTCCTTTGCAATGGCAGCAGGATACGAAGACTATGTGGGAAGAATTTGAAGCTATGTGAAGTGACGGTGAAGTCGAAGCGAGGCCAGCCCGCCACCTTCCTGCACGTTGCGCAGCGTGACTTCGCCGTTAAACAAACGGG > 2:1564693/1‑150 ATAGTCTTCTCCTTTGCAATGGCAGCAGGATACGAAGACTATGTGGGAAGAATTTGAAGCTATGTGAAGTGACGGTGAAGTCGAAGCGAGGCCAGCACGCCACCTTCCTGCACGTTGCGCAGCGTGACTTCGCCGTTAAACAAACGGGCG < 1:597388/150‑1 TAGTCTTCTCCTTTGCAATGGCAGCAGGATACGAAGACTATGTGGGAAGAATTTGAAGCTATGTGAAGTGACGGTGAAGTCGAAGCGAGGCCAGCACGCCACCTTCCTGCACGTTGCGCAGCGTGACTTCGCCGTTAAACAAACGGGCGA > 2:1028196/1‑150 GTCTTCTCCTTTGCAATGGCAGCAGGATACGAAGACTATGTGGGAAGAATTTGAAGCTATGTGAAGTGACGGTGAAGTCGAAGCGAGGCCAGCACGCCACCTTCCTGCACGTTGCGCAGCGTGACTTCGCCGTTAAACAAACGGGCGACC > 1:992787/1‑150 CTTCTCCTTTGCAATGGCAGCAGGATACGAAGACTATGTGGGAAGAATTTGAAGCTATGTGAAGTGACGGTGAAGTCGAAGCGAGGCCAGCACGCCACCTTCCTGCACGTTGCGCAGCGTGACTTCGCCGTTAAACAAACGGGCGACCTC > 2:1034468/1‑150 TCTCCTTTGCAATGGCAGCAGGATACGAAGACTATGTGGGAAGAATTTGAAGCTATGTGAAGTGACGGTGAAGTCGAAGCGAGGCCAGCACGCCACCTTCCTGCACGTTGCGCAGCGTGACTTCGCCGTTAAACAAACGGGCGACCTCAC < 1:1188090/150‑1 CTCCTTTGCAATGGCAGCAGGATACGAAGACTATGTGGGAAGAATTTGAAGCTATGTGAAGTGACGGTGAAGTCGAAGCGAGGCCAGCACGCCACCTTCCTGCACGTTGCGCAGCGTGACTTCGCCGTTAAACAAACGGGCGACCTCACT < 1:855609/150‑1 CTCCTTTGCAATGGCAGCAGGATACGAAGACTATGTGGGAAGAATTTGAAGCTATGTGAAGTGACGGTGAAGTCGAAGCGAGGCCAGCACGCCACCTTCCTGCACGTTGCGCAGCGTGACTTCGCCGTTAAACAAACGGGCGACCTCACT < 1:286523/150‑1 GGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4637987‑4638146‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acatagtcttcTCCTTTGCAATGGCAGCAGGATACGAAGACTATGTGGGAAGAATTTGAAGCTATGTGAAGTGACGGTGAAGTCGAAGCGAGGCCAGCACGCCACCTTCCTGCACGTTGCGCAGCGTGACTTCGCCGTTAAACAAACGGGCGACCTCACT < NC_000913/4638170‑4638022 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |