BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1074671	87 (0.940)	6 (0.070)	5/258	NT	6.4%	coding (430/639 nt)	rutR	DNA‑binding transcriptional dual regulator RutR
*	?	NC_000913	= 1074703	93 (1.080)	6 (0.070)	5/258	NT	6.4%	coding (462/639 nt)	rutR	DNA‑binding transcriptional dual regulator RutR

Only 100 of 128 total aligned reads displayed.

TCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTGACAGGCGCGACGTTGCGCGATGAGGTATTT  >  NC_000913/1074522‑1074820

tCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGC                                                                                                                                                       >  2:1138290‑M1/1‑150 (MQ=255)

tCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGC                                                                                                                                                       >  1:446790‑M1/1‑150 (MQ=255)

  aaaGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTg                                                                                                                                                     >  1:308367/1‑150 (MQ=255)

     gagTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGAtt                                                                                                                                                  >  1:1032643/1‑150 (MQ=255)

          cATCCGTCTGAAGCTGGAAGTCTCAGGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGGGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCgg                                                                                                                                             <  1:1225501/150‑1 (MQ=255)

          cATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCgagtttgccg                                                                                                                                             >  1:1022702‑M1/1‑140 (MQ=255)

               gTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTggg                                                                                                                                        <  2:397908/150‑1 (MQ=255)

               gTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTggg                                                                                                                                        <  2:1315264/150‑1 (MQ=255)

                tCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATTAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGt                                                                                                                                       <  2:203011/150‑1 (MQ=255)

                  tGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCa                                                                                                                                     <  2:1465049/150‑1 (MQ=255)

                   taaGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCaa                                                                                                                                    <  1:643796/149‑1 (MQ=255)

                             gTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCg                                                                                                                               >  2:950239/1‑145 (MQ=255)

                             gTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCg                                                                                                                               <  1:950239/145‑1 (MQ=255)

                                tcACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCtgtttgccgcttttgacccaaccggcaatcag                                                                                                                       <  1:772759‑M1/150‑33 (MQ=255)

                                tcACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTc                                                                                                                       <  2:892140/150‑1 (MQ=255)

                                 cACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCg                                                                                                                      >  1:1461576‑M2/1‑149 (MQ=255)

                                  aCGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCgc                                                                                                                     >  1:1076267‑M2/1‑148 (MQ=255)

                                   cgcgATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCgcg                                                                                                                    >  1:776016‑M2/1‑147 (MQ=255)

                                   cgcgATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCgcg                                                                                                                    <  1:1289853‑M2/150‑4 (MQ=255)

                                     cgATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCgcgcc                                                                                                                  >  1:809486‑M2/1‑145 (MQ=255)

                                     cgATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCgcgcc                                                                                                                  <  2:827538‑M2/150‑6 (MQ=255)

                                      gATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCgcgccg                                                                                                                 >  1:1138290‑M2/1‑144 (MQ=255)

                                       aTTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCgcgccga                                                                                                                <  1:698774‑M2/150‑8 (MQ=255)

                                         tATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCgagtttgccgcttttgacccaaccggcaatcagcgccgatt                                                                                                              <  2:1022702‑M1/150‑42 (MQ=255)

                                           tCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCAGTAATTGATGAGAAATCGGCGCgagtttgccgcttttgacccaaccggcaatcagcgccgatttc                                                                                                            <  1:667432‑M1/150‑44 (MQ=255)

                                             cGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATc                                                                                                          >  1:191492/1‑150 (MQ=255)

                                             cGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGAGCCGATTGATc                                                                                                          >  1:317819/1‑150 (MQ=255)

                                                   cTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTg                                                                                                             <  1:430837/141‑1 (MQ=255)

                                                        cgcCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTg                                                                                               >  2:465818/1‑150 (MQ=255)

                                                         gcCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCgagtttgccgcttttgacccaaccggcaatcagcgccgatttctcatcaattaatgc                                                                                              <  2:160588‑M1/150‑58 (MQ=255)

                                                              ttCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGAttttt                                                                                         <  2:1009300/150‑1 (MQ=255)

                                                               tCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTa                                                                                        <  1:1505705/150‑1 (MQ=255)

                                                                cTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTAt                                                                                       >  1:1461665/1‑150 (MQ=255)

                                                                 tGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATg                                                                                      >  1:530482/1‑150 (MQ=255)

                                                                  gTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGCCGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGa                                                                                     >  1:1633056/1‑150 (MQ=255)

                                                                      ggAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTg                                                                                 >  1:1260483/1‑150 (MQ=255)

                                                                           tGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCtt                                                                            >  2:663204/1‑150 (MQ=255)

                                                                            gCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTc                                                                           >  2:221580/1‑150 (MQ=255)

                                                                            gCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTc                                                                           >  2:280720/1‑150 (MQ=255)

                                                                             cTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTcc                                                                          >  1:188759/1‑150 (MQ=255)

                                                                               ggCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCAc                                                                        >  2:1385528/1‑150 (MQ=255)

                                                                                 cAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTc                                                                      <  1:471519/150‑1 (MQ=255)

                                                                                 cAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTc                                                                      >  1:133969/1‑150 (MQ=255)

                                                                                  aGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCa                                                                     <  1:1122345/150‑1 (MQ=255)

                                                                                   ggCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCaa                                                                    >  1:711082/1‑150 (MQ=255)

                                                                                   ggCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCaa                                                                    <  2:446790/150‑1 (MQ=255)

                                                                                     cgcgcCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCacgc                                                                                                                   <  2:222813‑M2/101‑5 (MQ=255)

                                                                                     cgcgcCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCacgc                                                                                                                   >  1:222813‑M2/1‑97 (MQ=255)

                                                                                          cgcTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACg                                                             >  2:1481815/1‑150 (MQ=255)

                                                                                           gcTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGc                                                            <  2:1175997/150‑1 (MQ=255)

                                                                                             tGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCg                                                          >  2:1490589/1‑150 (MQ=255)

                                                                                                tAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGAtt                                                       >  2:385929/1‑150 (MQ=255)

                                                                                                 aaTGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGAttt                                                      >  2:1435667/1‑150 (MQ=255)

                                                                                                 aaTGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGAttt                                                      >  1:1524875/1‑150 (MQ=255)

                                                                                                 aaTGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGAttt                                                      >  1:926173/1‑150 (MQ=255)

                                                                                                    ggATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGc                                                   >  1:952675/1‑150 (MQ=255)

                                                                                                    ggATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGc                                                   >  2:614961/1‑150 (MQ=255)

                                                                                                    ggATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGc                                                   <  2:1461665/150‑1 (MQ=255)

                                                                                                     gATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGcc                                                  <  1:586569/150‑1 (MQ=255)

                                                                                                     gATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGcc                                                  >  1:1136195/1‑150 (MQ=255)

                                                                                                      aTGAACTGACGTGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGccc                                                 <  2:1479123/150‑1 (MQ=255)

                                                                                                      aTGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGccc                                                 >  1:258165/1‑150 (MQ=255)

                                                                                                       tGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGcccc                                                <  2:711082/150‑1 (MQ=255)

                                                                                                            tGACGGGCGATTTTAAGGCATTAAATGAGGAGAACTCGGCGCTGATTGCGGGTTTGGTCAAAATGTTCAAACGCGCGCCGATTGATCCGCAGCATTTGTTTTTTATTAGTTGGGCTGCCACTCACCATTCGGGCGATTTCGCCCCTCAgg                                           <  2:1318496/150‑1 (MQ=255)

                                                                                                                 ggCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAg                                      <  1:1407868/150‑1 (MQ=255)

                                                                                                                 ggCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAg                                      <  2:698774/150‑1 (MQ=255)

                                                                                                                 ggCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAg                                      >  1:305880/1‑150 (MQ=255)

                                                                                                                     aTTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCgg                                  >  2:949934/1‑150 (MQ=255)

                                                                                                                     aTTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTGGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCgg                                  <  2:1430435/150‑1 (MQ=255)

                                                                                                                       ttGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTg                                <  1:1435667/150‑1 (MQ=255)

                                                                                                                            ggCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTGACAgg                           >  2:1252838/1‑150 (MQ=255)

                                                                                                                             gCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCgcgccgatttctcatcaattaatgccttcaaatcgcccgtcagttcatccattaacagcggcgcgcctgccagcatctccatacagaacaggc                          <  2:160588‑M2/150‑94 (MQ=255)

                                                                                                                              cATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTGACAGgcg                         >  1:966062/1‑150 (MQ=255)

                                                                                                                              cATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTGACAGgcg                         <  1:258138/150‑1 (MQ=255)

                                                                                                                                  aaTTGATGAGAAATCGGCGCTGATTGCCGGTTGGGGCAAAATCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTCTGATTTGGGCTTGCACTCAACATTACGGCGATTTCGCCCCTGAGGTGGAGGCGGTGACAGGCGCGAc                     <  2:1289121/150‑1 (MQ=255)

                                                                                                                                         gagaAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTGACAGGCGCGACGTTgcgc              >  1:1422526/1‑150 (MQ=255)

                                                                                                                                          agaAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTGACAGGCGCGACGTTGcgcg             <  1:1252838/150‑1 (MQ=255)

                                                                                                                                          agaAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTGACAGGCGCGACGTTGcgcg             >  1:1332883/1‑150 (MQ=255)

                                                                                                                                           gaAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCgcgccgatttctcatcaattactgccttcaaatcgcccgtcagttcatccattaacagcggcgcgcctgccagcatctccatacagaacaggcgcgaagcctgcgga            <  1:667432‑M2/150‑108 (MQ=255)

                                                                                                                                             aaTCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCgcgccgatttctcatcaattaatgccttcaaatcgcccgtcagttcatccattaacagcggcgcgcctgccagcatctccatacagaacaggcgcgaagcctgcggata          <  1:1607571‑M2/150‑110 (MQ=255)

                                                                                                                                             aaTCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTGACAGGCGCGACGTTGCGCGATg          <  2:624121/150‑1 (MQ=255)

                                                                                                                                             aaTCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTGACAGGCGCGACGTTGCGCGATg          >  1:669741/1‑150 (MQ=255)

                                                                                                                                              aTCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTGATAgg                           <  1:435763/132‑1 (MQ=255)

                                                                                                                                              aTCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTGATAgg                           >  2:435763/1‑132 (MQ=255)

                                                                                                                                              aTCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTGACAGGCGCGACGTTGCGCGATGa         <  2:1633056/150‑1 (MQ=255)

                                                                                                                                               tCGGCGCgagtttgccgcttttgacccaaccggcaatcagcgccgatttctcatcaattaatgccttcaaatcgcccgtcagttcatccattaacagcggctcgcctgccagcatctccatacagaacaggcgcgaagcctgcggataat        <  1:694605‑M1/150‑144 (MQ=255)

                                                                                                                                               tCGGCGCgagtttgccgcttttgacccaaccggcaatcagcgccgatttctcatcaattaatgccttcaaatcgcccgtcagttcatccattaacagcggcgcgcctgccagcatctccatacagaacaggcgcgaagcctgcggataat        <  1:698774‑M1/150‑144 (MQ=255)

                                                                                                                                                cGGCGCgagtttgccgcttttgacccaaccggcaatcagcgccgatttctcatcaattaatgccttcaaatcgcccgtcagttcatccattaacagcggcgcgcctgccagcatctccatacagaacaggcgcgaagcctgcggataatc       >  1:1138290‑M1/1‑6 (MQ=255)

                                                                                                                                                cGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTGACAGGCGCGACGTTGCGCGATGAgg       >  2:383161/1‑150 (MQ=255)

                                                                                                                                                cGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTGACAGGCGCGACGTTGCGCGATGAgg       >  1:1594457/1‑150 (MQ=255)

                                                                                                                                                 ggCGCgagtttgccgcttttgacccaaccggcaatcagcgccgatttctcatcaattaatgccttcaaatcgcccgtcagttcatccattaacagcggcgcgcctgccagcatctccatacagaacaggcgcgaagcctgcggataatcg      <  2:827538‑M1/150‑146 (MQ=255)

                                                                                                                                                  gcgtgagtttgccgcttttgacccaaccggcaatcagcgccgatttctcatcaattaatgccttcaaatcgcccgtcagttcatccattaacagcggcgcg                                                      >  1:222813‑M1/1‑4 (MQ=255)

                                                                                                                                                  gcgtgagtttgccgcttttgacccaaccggcaatcagcgccgatttctcatcaattaatgccttcaaatcgcccgtcagttcatccattaacagcggcgcg                                                      <  2:222813‑M1/101‑98 (MQ=255)

                                                                                                                                                  gcgcTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTGACAGGCGCGACGTTGCGCGATGAGGTa     <  2:515925/150‑1 (MQ=255)

                                                                                                                                                   cgcgagtttgccgcttttgacccaaccggcaatcagcgccgatttctcatcaattaatgccttcaaatcgcccgtcagttcatccattaacagcggcgcgcctgccagcatctccatacagaacaggcgcgaagcctgcggataatcgcg    <  1:1289853‑M1/150‑148 (MQ=255)

                                                                                                                                                   cgcgagtttgccgcttttgacccaaccggcaatcagcgccgatttctcatcaattaatgccttcaaatcgcccgtcagttcatccattaacagcggcgcgcctgccagcatctccatacagaacaggcgcgaagcctgcggataatcgcg    >  1:776016‑M1/1‑3 (MQ=255)

                                                                                                                                                    gcgagtttgccgcttttgacccaaccggcaatcagcgccgatttctcatcaattaatgccttcaaatcgcccgtcagttcatccattaacagcggcgcgcctgccagcatctccatacagaacaggcgcgaagcctgcggataatcgcgt   >  1:1076267‑M1/1‑2 (MQ=255)

                                                                                                                                                     cgagtttgccgcttttgacccaaccggcaatcagcgccgatttctcatcaattaatgccttcaaatcgcccgtcagttcatccattaacagcggcgcgcctgccagcatctccatacagaacaggcgcgaagcctgcggataatcgcgtg  >  1:1461576‑M1/1‑1 (MQ=255)

                                                                                                                                                     cTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTGACAGGCGCGACGTTGCGCGATGAGGTAttt  >  1:1477380/1‑150 (MQ=255)

                                                                                                                                                     cTGATTGCCGGTTGGGTCAAAAGCGGCAAACAcgccgatttctcatcaattaatgccttcaaatcgcccgtcagttcatccattaacagcggcgcgcctgccagcatctccatacagaacaggcgcgaagcctgcggataatcgcgtga   <  1:772759‑M2/150‑118 (MQ=255)

TCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTGACAGGCGCGACGTTGCGCGATGAGGTATTT  >  NC_000913/1074522‑1074820

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.