New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1270199	41 (0.440)	7 (0.080)	6/264	NT	16.8%	intergenic (+276/+39)	rdlB/ldrC	small regulatory antisense RNA RdlB/small toxic polypeptide LdrC
	?	NC_000913	= 1270223	30 (0.340)					intergenic (+300/+15)	rdlB/ldrC	small regulatory antisense RNA RdlB/small toxic polypeptide LdrC

GCTGTTGCAGTCGTTTCATGAGTGCTCTGGATGATGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCTGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTC  >  NC_000913/1270075‑1270343                                                                                                                                                     |                                                                                                                         gCTGTTGCAGTCGTTTCATGAGTGCTCTGGATGATGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGAc                                                                                                                         <  1:1353218‑M2/150‑2 (MQ=255) gCTGTTGCAGTCGTTTCATGAGTGCTCTGGACGATGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGAc                                                                                                                         <  2:1311320‑M2/150‑2 (MQ=255)  cTGTTGCAGTCGTTTCATGAGTGCTCTGGATGATGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGAcg                                                                                                                        <  2:979520‑M2/150‑3 (MQ=255)      tGCAGTCGTTTCATGAGTGCTCTGGATGATGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGAcgcccg                                                                                                                    <  2:1394417‑M2/150‑7 (MQ=255)       gCAGTCGTTTCATGAGTGCTCTGGATGATGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGt                                                                                                                   >  1:538246/1‑150 (MQ=38)         aGTCGTTTCATGAGTGCTCTGGATGATGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGttt                                                                                                                 <  2:1235048/150‑1 (MQ=37)         aGTCGGTTCATGAGTGCTCTGGATGATGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGttt                                                                                                                 <  2:813894/150‑1 (MQ=37)          gTCGTTTCATGAGTGCTCTGGATGATGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGtttt                                                                                                                >  2:458371/1‑150 (MQ=37)           tCGTTTCATGAGTGCTCTGGATGATGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTc                                                                                                               <  2:456495/150‑1 (MQ=37)             gTTTCATGAGTGCTCTGGATGATGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCAc                                                                                                             <  2:906206/150‑1 (MQ=35)                  aTGAGTGCTCTGGATGATGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTAc                                                                                                        <  1:1154711/150‑1 (MQ=34)                  aTGAGTGCTCTGGATGATGCGTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCCCCTTAc                                                                                                        >  1:72509/1‑150 (MQ=21)                      gTGCTCTGGATGATGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTcc                                                                                                    <  1:979520/150‑1 (MQ=34)                       tGCTCTGGATGATGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCg                                                                                                   <  2:93688/150‑1 (MQ=34)                           ctGGATGATGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTa                                                                                               >  2:1282105/1‑150 (MQ=34)                           ctGGATGATGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTa                                                                                               <  1:1441139/150‑1 (MQ=34)                             ggATGATGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACg                                                                                             >  1:1077734/1‑150 (MQ=34)                                tgatgCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGGCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTGACCTTACTTCGGGTTTCGgca                                                                                          <  2:991656/150‑1 (MQ=11)                                 gatgCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGccac                                                                                         <  2:1526118/150‑1 (MQ=34)                                  atgCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGccacc                                                                                        >  2:851859/1‑150 (MQ=33)                                  atgCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACATTACTTCCGGTTACGccacc                                                                                        >  2:1197862/1‑150 (MQ=18)                                     cTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGc                                                                                     <  1:205165/150‑1 (MQ=32)                                        ccAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCTGa                                                                                  <  1:239542/150‑1 (MQ=34)                                            cTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCTGACAAt                                                                              >  2:296949/1‑150 (MQ=34)                                                ggTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCTGACAATCGCt                                                                          <  2:1244930/150‑1 (MQ=34)                                                   tGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCTGACAATCGCTGCg                                                                       >  2:772251/1‑150 (MQ=34)                                                   tGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCTGACAATCGCTGCg                                                                       >  2:1438202/1‑150 (MQ=34)                                                   tGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCTGACAATCGCTGCg                                                                       <  1:1075432/150‑1 (MQ=34)                                                   tGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCTGACAATCGCTGCg                                                                       <  1:1492143/150‑1 (MQ=34)                                                   tGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCTGACAATCGCTGCg                                                                       <  1:1498151/150‑1 (MQ=34)                                                    gCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCTGACAATCGCTGCgg                                                                      >  2:1201417/1‑150 (MQ=34)                                                     ccAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCTGACAATCGCTGCGGt                                                                     <  2:594809/150‑1 (MQ=34)                                                       aaTATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGCCGCCCGTTTTCACCTTACTTCCGGTTGCGCCACCAGCTGACAATCGCTGCGGtaa                                                                   >  2:495981/1‑150 (MQ=21)                                                       aaTATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCTGACAATCGCTGCGGtaa                                                                   >  1:1274581/1‑150 (MQ=34)                                                              aCTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCTGACAATCGCTGCGGTAATAATTcc                                                            <  2:221001/150‑1 (MQ=34)                                                                        gagaTAAAGACAAAACTGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCTGACAATCGCTGCGGTAATAATTCCCGCCAGGATc                                                  <  1:1577536/150‑1 (MQ=18)                                                                            tAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCTGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGtg                                              >  2:147163/1‑150 (MQ=32)                                                                                  cAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCTGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCTGCCa                                        >  1:1033938/1‑150 (MQ=32)                                                                                    aaaaTGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCTGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCTGCCAgg                                      >  1:691569/1‑150 (MQ=32)                                                                                                                  cGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGAcgcccgaaaccggccgcaggggtaacagcctgcggccatttttgtcttcatctcttccacaagtaaatattggcaacccgagctggaagcatcatccagagcactcatgaaacg        <  1:1111575‑M2/150‑115 (MQ=255)                                                                                                                    gTTTCGGGCGCATATTGCCATCACGGCAGCCTGAcgcccgaaaccggccgcaggggtaacagcctgcggccatttttgtctttatctcttccacaagtaaatattggcaacccgagctggaagcatcatccagagcactcatgaaacgac      <  1:263662‑M2/150‑117 (MQ=255)                                                                                                                    gTTTCGGGCGCATATTGCCATCACGGCAGCCTGAcgcccgaaaccggccgcaggggtaacagcctgcggccatttttgtctttatctcttccacaagtaaatattggcaacccgagctggaagcatcatccagagcactcatgaaacgac      <  2:1224418‑M2/150‑117 (MQ=255)                                                                                                                     tttCGGGCGCATATTGCCATCACGGCAGCCTGAcgcccgaaaccggccgcaggggtaacagcctgcggccatttttgtctttatctcttccacaagtaaatattggcaacccgagctggaagc                                >  2:1160777‑M2/1‑33 (MQ=255)                                                                                                                     tttCGGGCGCATATTGCCATCACGGCAGCCTGAcgcccgaaaccggccgcaggggtaacagcctgcggccatttttgtctttatctcttccacaagtaaatattggcaacccgagctggaagc                                <  1:1160777‑M2/123‑91 (MQ=255)                                                                                                                       tCGGGCGCATATTGCCATCACGGCAGCCTGAcgcccgaaaccggccgcaggggtaacagcctgcggccatttttgtctttatctcttccacaagtaaatattggcaccccgagctggaagcatcatccagagcactcatgaaacgactgc   <  1:540461‑M2/150‑120 (MQ=255)                                                                                                                        cGGGCGCATATTGCCATCACGGCAGCCTGAcgcccgaaaccggccgcaggggtaacagcctgcggccatttttgtctttatctcttccacaagtaaatattggcaacccgagctggaagcatcatccagagcactcatgaaacgactgca  <  2:1118610‑M2/150‑121 (MQ=255)                                                                                                                                                     |                                                                                                                         GCTGTTGCAGTCGTTTCATGAGTGCTCTGGATGATGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCTGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTC  >  NC_000913/1270075‑1270343

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.