New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2571925 =91 (0.990)13 (0.150) 10/266 NT 12.8% coding (126/288 nt) eutN putative carboxysome structural protein
?NC_000913 2571943 = 90 (1.010)coding (108/288 nt) eutN putative carboxysome structural protein

Only 100 of 125 total aligned reads displayed.

CCACCTCATCGACAATGCCAATCACGCACAGATCGACCGGTGACGTTTCGCTTTTATGCGCCTGGCGGGCGGAACTGCCACTCACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCAGTTTCATACCCGCCTCCGTGGCGTATTTCAGGTAAAAGCTCCCCCTACC  >  NC_000913/2571795‑2572092
                                                                                                                                                    |                                                                                                                                                     
gaaatacgccacggaggcgggtatgaaactggcagtcgtcactggacaaattgtttgtaccgtacgccatcacggactggcgcatgacaaattgctgatggtggaaatgattgatccacaaggtaatcctGACGGCGCATTGCCCGTCAg                                                                                                                                                      >  1:176103‑M1/131‑150 (MQ=255)
gaaatacgccacggaggcgggtatgaaactggcagtcgtcactggacaaattgtttgcaccgtacgccatcacggactggcgcatgacaaattgctgatggtggaaatgattgatccacaaggtaatcctGACGGCGCATTGCCCGTCAg                                                                                                                                                      >  1:374243‑M1/131‑150 (MQ=255)
 aaatacgccacggaggcgggtatgaaactggcagtcgtcactggacaaattgtttgtaccgtacgccatcacggactggcgcatgacaaattgctgatggtggaaatgattgatccacaaggtaatcctGACGGCGCATTGCCCGTCAgg                                                                                                                                                     >  2:733950‑M1/130‑150 (MQ=255)
 aaatacgccacggaggcgggtatgaaactggcagtcgtcactggacaaattgtttgtaccgtacgccatcacggactggcgcatgacaaattgctgatggtggaaatgattgatccacaaggtaatcctGACGGCGCATTGCCCGTCAgg                                                                                                                                                     >  2:1168078‑M1/130‑150 (MQ=255)
  accTCATCGACAATGCCAATCACGCACAGATCGACCGGTGACGTTTCGCTTTTATGCGCCTGGCGGGCGGAACTGCCACTCACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGa                                                                                                                                                    <  1:1347943/150‑1 (MQ=255)
  aatacgccacggaggcgggtatgaaactggcagtcgtcactggacaaattgtttgtaccgtacgccatcacggactggcgcatgacaaattgctgatggtggaaatgattgatccacaaggtaatcctGACGGCGCATTGCCCGTCAGGa                                                                                                                                                    >  1:174490‑M1/129‑150 (MQ=255)
    tacgccacggaggcgggtatgaaactggcagtcgtcactggacaaattgtttgtaccgtacgccatcacggactggcgcatgacaaattgctgatggtggaaatgattgatccacaaggtaatcctGACGGCGCATTGCCCGTCAGGAtt                                                                                                                                                  >  1:533357‑M1/127‑150 (MQ=255)
      cgccacggaggcgggtatgaaactggcagtcgtcactggacaaattgtttgtaccgtacgccatcacggactggcgcatgacaaattgctgatggtggaaatgattgatccacaaggtaatcctGACGGCGCATTGCCTGTCAGGATTAc                                                                                                                                                >  1:1013215‑M1/125‑150 (MQ=255)
      cATCGACAATGCCAATCACGCACAGATCGACCGGTGACGTTTCGCTTTTATGCGCCTGGCGGGCGGAACTGCCACTCACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTAc                                                                                                                                                <  2:1521613/150‑1 (MQ=255)
      cATCGACAATGCCAATCACGCACAGATCGACCGGTGACGTTTCGCTTTTATGCGCCTGGCGGGCGGAACTGCCACTCACCAGTAACACCCACTCCCCGGTTCCCGAGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTAc                                                                                                                                                >  1:1394207/1‑150 (MQ=255)
          gACAATGCCAATCACGCACAGATCGACCGGTGACGTTTCGCTTTTATGCGCCTGGCGGGCGGAACTGCCACTCACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTtg                                                                                                                                            <  2:1605018/150‑1 (MQ=255)
           aCAATGCCAATCACGCACAGATCGACCGGTGACGTTTCGCTTTTATGCGCCTGGCGGGCGGAACTGCCACTCACCAGTAACACCCACTCGCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTtgt                                                                                                                                           <  2:1378440/150‑1 (MQ=255)
               tGCCAATCACGCACAGATCGACCGGTGACGTTTCGCTTTTATGCGCCTGGCGGGCGGAACTGCCACTCACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGat                                                                                                                                       >  1:1300750/1‑150 (MQ=255)
               tGCCAATCACGCACAGATCGACCGGTGACGTTTCGCTTTTATGCGCCTGGCGGGCGGAACTGCCACTCACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGat                                                                                                                                       >  1:690409/1‑150 (MQ=255)
               tGCCAATCACGCACAGATCGACCGGTGACGTTTCGCTTTTATGCGCCTGGCGGGCGGAACTGCCACTCACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGat                                                                                                                                       >  1:1295021/1‑150 (MQ=255)
                    aTCACGCAGAGATCTACCGGTTACGTTTCGCTTTTATGCGCCTGGCGGGCGGAACTGCCACTCACCAGTAACACCCACTCCCCTGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGatcaatc                                                                                                                                  <  2:419451/150‑1 (MQ=255)
                        gaaactggcagtcgtcactggacaaattgtttgtaccgtacgccatcacggactggcgcatgacaaattgctgatggtggaaatgattgatccacaaggtaatcctGACGGCGCATTGCCCGTCAGGATTACCTTGTGGatcaatc                                                                                                                                  >  2:717535‑M1/107‑146 (MQ=255)
                        cGCACAGATCGACCGGTGACGTTTCGCTTTTATGCGCCTGGCGGGCGGAACTGCCACTCACCATTAACACCGACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGAGCATTGCCCGTCAGGATTAACTTTTGGATCAATCAttt                                                                                                                              <  2:146306/150‑1 (MQ=255)
                          cacaGATCGACCGGTGACGTTTCGCTTTTATGCGCCTGGCGGGCGGAACTGCCACTCACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTcc                                                                                                                            <  1:246998/150‑1 (MQ=255)
                             tggcagtcgtcactggacaaattgtttgtaccgtacgccatcacggactggcgcatgacaaattgctgatggtggaaatgattgatccacaaggtaatcctGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTccacc                                                                                                                         >  2:967696‑M1/102‑150 (MQ=255)
                              gATCGACCGGTGACGTTTCGCTTTTATGCGCCTGGCGGGCGGAACTGCCACTCACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTccacca                                                                                                                        >  2:787797/1‑150 (MQ=255)
                               aTCGACCGGTGACGTTTCGCTTTTATGCGCCTGGCGGGCGGAACTGCCACTCACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCAt                                                                                                                       <  2:1308680/150‑1 (MQ=255)
                                 cGACCGGTGACGTTTCGCTTTTATGCGCCTGGCGGGCGGAACTGCCACTCACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCa                                                                                                                     >  1:118127/1‑150 (MQ=255)
                                  gACCGGTGACGTTTCGCTTTTATGCGCCTGGCGGGCGGAACTGCCACTCACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAg                                                                                                                    <  2:232310/150‑1 (MQ=255)
                                  gACCGGTGACGTTTCGCTTTTATGCGCCTGGCGGGCGGAACTGCCACTCACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAg                                                                                                                    >  1:909683/1‑150 (MQ=255)
                                  gACCGGTGACGTTTCGCTTTTATGCGCCTGGCGGGCGGAACTGCCACTCACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAg                                                                                                                    >  2:989635/1‑150 (MQ=255)
                                      ggTGACGTTTCGCTTTTATGCGCCTGGCGGGCGGAACTGCCACTCACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAAt                                                                                                                >  2:789557/1‑150 (MQ=255)
                                       gTGACGTTTCGCTTTTATGCGCCTGGCGGGCGGAACTGCCACTCACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAAtt                                                                                                               >  2:1057772/1‑150 (MQ=255)
                                       gTGACGTTTCGCTTTTATGCGCCTGGCGGGCGGAACTGCCACTCACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAAtt                                                                                                               >  2:800529/1‑150 (MQ=255)
                                              ttCGCTTTTATGCGCCTGGCGGGCGGAACTGCCACTCACCAGTAACCCCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCGCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATg                                                                                                        >  1:1041411/1‑150 (MQ=255)
                                               tCGCTTTTATGCGCCTGGCGGGCGGAACTGCCACTCACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATgc                                                                                                       >  1:524972/1‑150 (MQ=255)
                                                  cTTTTATGCGCCTGGCGGGCGGAACTGCCACTCACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGcc                                                                                                    <  1:800529/150‑1 (MQ=255)
                                                  cTTTTATGCGCCTGCCTGGCGGTACTGCCACTCACCAGTAACACGATCTCCCCGGTTCCCGCGCCATTATTTTCTATGGCTACGGCGCATTGCGCGTCAGGATTTGCTTTTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGcc                                                                                                    <  2:1451617/150‑1 (MQ=255)
                                                   ttttATGCGCCTGGCGGGCGGAACTGCCACTCACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCa                                                                                                   <  2:160880/150‑1 (MQ=255)
                                                      tATGCGCCTGGCGGGCGGAACTGCCACTCACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTtgtg                                                                                                                                          >  2:541500/1‑108 (MQ=255)
                                                          cgcCTGGCGGGCGGAACTGCCACTCACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTg                                                                                            <  2:1300750/150‑1 (MQ=255)
                                                          cgcCTGGCGGGCGGAACTGCCACTCACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTg                                                                                            <  2:1295021/150‑1 (MQ=255)
                                                             cTGGCGGGCGGAACTGCCACTCACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATg                                                                                         <  2:150114/150‑1 (MQ=255)
                                                             cTGGCGGGCGGAACTGCCACTCACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATg                                                                                         >  1:698361/1‑150 (MQ=255)
                                                                 cgggcggAACTGCCACTCACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGt                                                                                     >  2:1084609/1‑150 (MQ=255)
                                                                     cggAACTGCCACTCACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATCCGCCAGTCCGTGATGGCGTACgg                                                                                 >  2:711603/1‑150 (MQ=255)
                                                                      ggAACTGCCACTCACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGt                                                                                >  1:617831/1‑150 (MQ=255)
                                                                        aaCTGCCACTCACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTac                                                                              <  1:1215994/150‑1 (MQ=255)
                                                                          cTGCCACTCACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTacaa                                                                            >  1:691394/1‑150 (MQ=255)
                                                                              cACTCACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTacaaacaa                                                                        >  2:1047756/1‑150 (MQ=255)
                                                                               aCTCACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTacaaac                                                                          <  2:273821/147‑1 (MQ=255)
                                                                               aCTCACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTacaaac                                                                          >  1:273821/1‑147 (MQ=255)
                                                                                  cACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATgcg                                                                                                      <  1:1288063/116‑1 (MQ=255)
                                                                                  cACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTg                                                                    >  2:1559596/1‑150 (MQ=255)
                                                                                  cACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTg                                                                    >  1:1242808/1‑150 (MQ=255)
                                                                                  cACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTg                                                                    <  1:787797/150‑1 (MQ=255)
                                                                                  cACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTg                                                                    >  2:390032/1‑150 (MQ=255)
                                                                                  cACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTg                                                                    >  2:1218266/1‑150 (MQ=255)
                                                                                    ccAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTggt                                                                  >  1:1320452/1‑148 (MQ=255)
                                                                                     cAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTcc                                                                 <  1:1431272/150‑1 (MQ=255)
                                                                                       gTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAg                                                               >  2:559259/1‑150 (MQ=255)
                                                                                       gTAACACCCACTCCCCGGGTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAg                                                               <  2:1610377/150‑1 (MQ=255)
                                                                                        tAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGGGTACGGTACAAACAATTTGTCCAGt                                                              <  2:141225/150‑1 (MQ=255)
                                                                                         aaCACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTg                                                             >  1:764950/1‑150 (MQ=255)
                                                                                           cacCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATAAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTgac                                                           >  1:1146820/1‑150 (MQ=255)
                                                                                            acCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTgacg                                                          >  1:521505/1‑150 (MQ=255)
                                                                                            acCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTgacg                                                          >  1:635831/1‑150 (MQ=255)
                                                                                             cccACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTgacga                                                         >  2:496769/1‑150 (MQ=255)
                                                                                                 cTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGc                                                     >  1:1567123/1‑150 (MQ=255)
                                                                                                   ggtggaaatgattgatccacaaggtaatcctgacgggcaatgcgccgtcAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCa                                                   >  2:967696‑M2/50‑150 (MQ=255)
                                                                                                   ccccGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCCCCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCa                                                   >  1:1039559/1‑150 (MQ=255)
                                                                                                   ccccGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCa                                                   >  2:256976/1‑150 (MQ=255)
                                                                                                   ccccGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCa                                                   >  2:262875/1‑150 (MQ=255)
                                                                                                   ccccGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCa                                                   >  1:1225487/1‑150 (MQ=255)
                                                                                                   ccccGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCa                                                   >  2:1169107/1‑150 (MQ=255)
                                                                                                            gattgatccacaaggtaatcctgacgggcaatgcgccgtcAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCAGTTTc                                              <  1:717535‑M2/106‑1 (MQ=255)
                                                                                                                  cAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCAGTTTCATACCCGccg                                    >  1:691958/1‑149 (MQ=255)
                                                                                                                      atTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCAGTTTCATACCCGCCTCCGt                                >  2:376596/1‑150 (MQ=255)
                                                                                                                          gtaatcctgacaggcaatgcgccgtcAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCAGTTTCATACCCGCCTCCGTGGCg                            >  1:1013215‑M2/27‑150 (MQ=255)
                                                                                                                            gATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCAGTTTCATACCCGCCTCCGTGGCGTa                          <  2:649881/150‑1 (MQ=255)
                                                                                                                            gATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCAGTTTCATACCCGCCTCCGTGGCGTa                          >  2:724857/1‑150 (MQ=255)
                                                                                                                            gATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCAGTTTCATACCCGCCTCCGTGGCGTa                          >  1:590156/1‑150 (MQ=255)
                                                                                                                            aatcctgacgggcaatgcgccgtcAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCAGTTTCATACCCGCCTCCGTGGCGTa                          >  1:533357‑M2/25‑150 (MQ=255)
                                                                                                                            aatcctgacgggcaatgcgccgtcAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCAGTTTCATACCCCCCTCCGTGGCGTa                          >  1:1199314‑M2/25‑150 (MQ=255)
                                                                                                                             atcctgacgggcaatgcgccgtcAGGATTACCTTTTGGATCAATCATTTCCACCATCCGCAATTTGTCAAGCGCCAGTCCGTGATGGCGTAAGGTACAACCAATTTGTCCAGTGACGCCTGCCAGTTTCATACCCGCCGCCGTGGCGGAt                         >  1:1320086‑M2/24‑150 (MQ=255)
                                                                                                                               ggCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCAGTTTCATACCCGCCTCCGTGGCGTAttt                       >  1:637070/1‑150 (MQ=255)
                                                                                                                               cctgacgggcaatgcgccgtcAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCAGTTTCATACCCGCCTCCGTGGCGTAttt                       >  2:733950‑M2/22‑150 (MQ=255)
                                                                                                                               cctgacgggcaatgcgccgtcAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCAGTTTCATACCCGCCTCCGTGGCGTAttt                       >  2:1168078‑M2/22‑150 (MQ=255)
                                                                                                                                ctgacgggcaatgcgccgtcAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTGCAAACAATTTGTCCAGTGACGACTGCCAGTTTCATACCCGCCTCCGTGGCGTATTTc                      >  1:374243‑M2/21‑150 (MQ=255)
                                                                                                                                ctgacgggcaatgcgccgtcAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCAGTTTCATACCCGCCTCCGTGGCGTATTTc                      >  1:176103‑M2/21‑150 (MQ=255)
                                                                                                                                 cGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCAGTTTCATACCCGCCTCCGTGGCGTATTTCa                     <  1:256976/150‑1 (MQ=255)
                                                                                                                                 cGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCAGTTTCATACCCGCCTCCGTGGCGTATTTCa                     <  2:829385/150‑1 (MQ=255)
                                                                                                                                 cGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGGCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCAGTTTCATACCCGCCTCCGTGGCGTATTTCa                     <  1:1057772/150‑1 (MQ=255)
                                                                                                                                   ACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGTTGTACGTTACATACTATTAGTCCAGTGAGGACTGCCTTTTTAATAGCCTCCTCTGTGGCGTATTTCAgg                   >  2:1473750‑M1/1‑150 (MQ=255)
                                                                                                                                   ACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCAGTTTCATACCCGCCTCCGTGGCGTATTTCAgg                   >  2:764950‑M1/1‑150 (MQ=255)
                                                                                                                                    CGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCAGTTTCATACCCGCCTCCGTGGCGTATTTCAGGt                  >  2:909683‑M1/1‑150 (MQ=255)
                                                                                                                                    CGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCAGTTTCATACCCGCCTCCGTGGCGTATTTCAGGt                  >  2:690409‑M1/1‑150 (MQ=255)
                                                                                                                                      ggcaatgcgccgtcAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCAGTTTCATACCCGCCTCCGTGGCGTATTTCAGGTaa                >  2:323588‑M2/15‑150 (MQ=255)
                                                                                                                                       cgcATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCAGTTTCATACCCGCCTCCGTGGCGTATTTCAGGTaaa               <  2:524972/150‑1 (MQ=255)
                                                                                                                                        gcATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCAGTTTCATACCCGCCTCCGTGGCGTATTTCAGGTaaaa              <  1:1314996/150‑1 (MQ=255)
                                                                                                                                         cATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCAGTTTCATACCCGCCTCCGTGGCGTATTTCAGGTAAAAg             <  1:363526/150‑1 (MQ=255)
                                                                                                                                          aTTGCCCGTCAGGATTACCTTGTGGCTCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCAGTTTCATACCCGCCTCCGTGGCGTATTTCAGGTAAAAGc            <  2:1521269/150‑1 (MQ=255)
                                                                                                                                          aTTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCAGTTTCATACCCGCCTCCGTGGCGTATTTCAg                    <  2:1512845/142‑1 (MQ=255)
                                                                                                                                          aTTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCAGTTTCATACCCGCCTCCGTGGCGTATTTCAg                    >  1:1512845/1‑142 (MQ=255)
                                                                                                                                                    aGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCAGTTTCATACCCGCCTCCGTGGCGTATTTCAGGTAAAAGCTCCCCCTAcc  <  1:1169107/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
CCACCTCATCGACAATGCCAATCACGCACAGATCGACCGGTGACGTTTCGCTTTTATGCGCCTGGCGGGCGGAACTGCCACTCACCAGTAACACCCACTCCCCGGTTCCCGCGCCAATATTGTCGATGGCGACGGCGCATTGCCCGTCAGGATTACCTTGTGGATCAATCATTTCCACCATCAGCAATTTGTCATGCGCCAGTCCGTGATGGCGTACGGTACAAACAATTTGTCCAGTGACGACTGCCAGTTTCATACCCGCCTCCGTGGCGTATTTCAGGTAAAAGCTCCCCCTACC  >  NC_000913/2571795‑2572092

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.