| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,816,206 | T→G | 6.4% | intergenic (+78/+180) | katE → / ← chbG | catalase II/chitin disaccharide deacetylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,816,206 | 0 | T | G | 6.4% | 341.2 / 13.1 | 109 | intergenic (+78/+180) | katE/chbG | catalase II/chitin disaccharide deacetylase |
| Reads supporting (aligned to +/- strand): ref base T (53/49); new base G (3/4); total (56/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.11e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.65e-01 | |||||||||||
Only 100 of 110 total aligned reads displayed.
AACTGCTAACGCTGATGGCAGCACACCGCGTGTGGTCACGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCA > NC_000913/1816058‑1816353 | aaCTGCTAACGCTGATGGCAGCACACCGCGTGTGGTCACGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCtt > 2:556578/1‑150 (MQ=255) tGCTAACGCTGATGGCAGCACACCGCGTGTGGTCACGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATc > 1:745277/1‑150 (MQ=255) gCTAACGCTGATGGCAGCACACCGCGTGTGGTCACGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATcc > 2:857662/1‑150 (MQ=255) gCTAACGCTGATGGCAGCACACCGCGTGTGGTCACGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATcc > 2:1330595/1‑150 (MQ=255) tAACGCTGATGGCAGCACACCGCGTGTGGTCACGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCgg < 1:108561/150‑1 (MQ=255) aCGCTGATGGCAGCACACCGCGTGTGGTCACGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGcc < 2:277177/150‑1 (MQ=255) aCGCTGATGGCAGCACACCGCGTGTGGTCACGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATAAGGCGTTCACGCCGCATCCGGca < 1:1621023/150‑2 (MQ=255) aCGCTGATGGCAGCACACCGCGTGTGGTCACGCATCCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGcc < 1:1285724/150‑1 (MQ=255) cGCTGATGGCAGCACACCGCGTGTGGTCACGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCt > 2:332982/1‑150 (MQ=255) tGATGGCAGCACACCGCGTGTGGTCACGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACa < 1:1374872/150‑1 (MQ=255) tGATGGCAGCACACCGCGTGTGGTCACGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATAAGGCGTTCACGCCGCATCCGGCATaaa < 2:426349/150‑3 (MQ=255) gATGGCAGCACACCGCGTGTGGTCACGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACaa > 1:841535/1‑150 (MQ=255) gATGGCAGCACACCGCGTGTGGTCACGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATAAGGCGTTCACGCCGCATCCGGCATaaac < 1:958465/150‑4 (MQ=38) aTGGCAGCACACCGCGTGTGGTCACGCATTCCTAAGATTGACAAAATTCGTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACaaa > 2:761219/1‑150 (MQ=255) ggCAGCACACCGCGTGTGGTCACGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAc > 2:642732/1‑150 (MQ=255) gcagcaCACCGCGTGTGGTCACGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACt > 2:313394/1‑150 (MQ=255) gcaCACCGCGTGTGGTCACGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACtgtg < 1:805568/150‑1 (MQ=255) cacaCCGCGTGTGGTCACGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGc > 2:571220/1‑150 (MQ=255) cacaCCGCGTGTGGTCACGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGc < 2:279629/150‑1 (MQ=255) acacCGCGTGTGGTCACGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCa < 1:14437/150‑1 (MQ=255) gtgGTCACGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAata < 2:1383033/150‑1 (MQ=255) gtgGTCACGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAata < 1:940469/150‑1 (MQ=255) tgGTCACGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAatat > 1:1511582/1‑150 (MQ=255) tgGTCACGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAatat > 1:1511580/1‑150 (MQ=255) aCGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGc < 1:859289/150‑1 (MQ=255) cGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCa > 2:774655/1‑150 (MQ=255) gCATTCCTAAGATTGACAAACTTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCGTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAg < 2:1154099/150‑1 (MQ=255) gCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAg < 2:304538/150‑1 (MQ=255) cATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAc < 2:1418551/126‑1 (MQ=255) cATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAc > 1:1418551/1‑126 (MQ=255) cTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAaca < 1:671023/150‑1 (MQ=255) gACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCa > 2:1306909/1‑135 (MQ=255) gACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCa < 1:1306909/135‑1 (MQ=255) gACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGcc > 2:1303086/1‑150 (MQ=255) gACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGcc < 2:1451430/150‑1 (MQ=255) cAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTg > 1:737851/1‑150 (MQ=255) cAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTg > 2:1405187/1‑150 (MQ=255) cAAAATTCCTGCCTGATGCGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTg > 2:1356994/1‑150 (MQ=255) aaaaTTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGa > 1:904914/1‑150 (MQ=255) aaaTTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGAt < 2:259821/150‑1 (MQ=255) aaTTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATa > 1:753652/1‑150 (MQ=255) aaTTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATa < 1:612071/150‑1 (MQ=255) tCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATaagc < 2:1211994/150‑1 (MQ=255) tCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATaagc < 1:57342/150‑1 (MQ=255) tCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATaagc < 2:79183/150‑1 (MQ=255) cctgcctgATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATaagcg < 2:841535/150‑1 (MQ=255) cctgcctgATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATaagcg > 1:1027785/1‑150 (MQ=255) cctgcctgATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATaagcg > 1:1022251/1‑150 (MQ=255) ctgcctgATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATaagcga < 1:1218994/150‑1 (MQ=255) gcctgATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATaagcgaag > 1:1538464/1‑150 (MQ=255) gcctgATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTCTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATaagcgaag < 1:854384/150‑1 (MQ=255) gATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCa > 2:467282/1‑150 (MQ=255) aTGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCAt > 1:297433/1‑150 (MQ=255) tGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATc > 2:204076/1‑150 (MQ=255) tGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATc > 2:213615/1‑150 (MQ=255) tgAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAg > 1:926044/2‑150 (MQ=255) tgAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAg > 2:1173900/2‑150 (MQ=255) ggAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAg < 2:745277/150‑1 (MQ=255) aGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGc > 2:1166457/1‑150 (MQ=255) aGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGc > 1:267293/1‑150 (MQ=255) ggcggcGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCa > 1:388905/1‑150 (MQ=255) cggcgCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGt > 1:1120613/1‑150 (MQ=255) cggcgCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGt < 2:1511582/150‑1 (MQ=255) cggcgCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGt < 2:1511580/150‑1 (MQ=255) gcAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTg > 2:678494/1‑150 (MQ=255) aaTTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCg < 2:75244/150‑1 (MQ=255) aaTTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCg > 1:1122861/1‑150 (MQ=255) aaTTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCg < 2:1538464/150‑1 (MQ=255) gcgcCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTg < 1:774655/150‑1 (MQ=255) gcgcCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTg < 1:1330595/150‑1 (MQ=255) gccgccTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTc > 2:170362/1‑150 (MQ=255) ccgccTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTca > 2:1233749/1‑150 (MQ=255) cgccTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTcag < 1:286488/150‑1 (MQ=255) gccTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTcagc < 1:556578/150‑1 (MQ=255) cTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTcagcag < 2:1022251/150‑1 (MQ=255) cTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTcagcag < 2:1027785/150‑1 (MQ=255) cTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTcagcag < 1:743529/150‑1 (MQ=255) tttACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAgcg < 1:213615/150‑1 (MQ=255) tttACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAgcg < 1:204076/150‑1 (MQ=255) tACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAgcggc > 1:541300/1‑150 (MQ=255) aCATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAgcggcg > 2:81709/1‑150 (MQ=255) cATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTTATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGgcgc > 1:353599/1‑150 (MQ=255) tAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAg < 2:882705/150‑1 (MQ=255) aGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGt > 2:1415591/1‑150 (MQ=255) ttATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGTAACTGcgccgcttga < 1:1573052/150‑5 (MQ=18) aTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGt < 1:1394928/150‑1 (MQ=255) aTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGt < 1:642732/150‑1 (MQ=255) tGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTa > 1:280119/1‑150 (MQ=255) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTa > 2:1512631/2‑150 (MQ=21) gCCGGATGCGCCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAg < 2:765963/150‑1 (MQ=255) ccGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAgg < 1:467282/150‑1 (MQ=255) ccGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAgg > 2:1163064/1‑150 (MQ=21) gATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAAt < 1:904754/150‑1 (MQ=255) ggcgTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATc > 2:347762/1‑150 (MQ=255) tGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCg < 1:1303086/150‑1 (MQ=255) gAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAg > 2:1033478/1‑119 (MQ=255) gAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAg < 1:1033478/119‑1 (MQ=255) gAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCgg < 1:1239502/150‑1 (MQ=255) gAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCgg < 1:1233749/150‑1 (MQ=255) ccTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCa > 2:1247005/1‑150 (MQ=255) | AACTGCTAACGCTGATGGCAGCACACCGCGTGTGGTCACGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCA > NC_000913/1816058‑1816353 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |